Os02g0219200

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Revision as of 02:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0219200| Description = Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta- galactosidase) (Exo-(1-->4)-beta-D-galacta...")
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Gene Name

Os02g0219200

Description

Similar to Beta-galactosidase precursor (EC 3.2.1.23) (Lactase) (Acid beta- galactosidase) (Exo-(1-->4)-beta-D-galactanase)

Version

NM_001052845.1 GI:115445060 GeneID:4328745

Length

3123 bp

Definition

Oryza sativa Japonica Group Os02g0219200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6685266..6688388

Sequence Coding Region

6685393..6685501,6685957..6686159,6686282..6686494,6686583..6686692,6686778..6686881
,6686976..6687145,6687237..6687401,6687484..6687602,6687753..6687840
,6687935..6688040,6688135..6688223,6688361..6688387

Expression

GEO Profiles:Os02g0219200

Genome Context

<gbrowseImage1> name=NC_008395:6685266..6688388 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6685266..6688388 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>aagcaggacgacgcccctgacccagtgatcaacacttgcaatggattttactgcgactacttcagcccaaacaagaattacaagccgtccatgtggactgaggcctggaccggctggtttacatcgttcggaggtggggtgccgcatcggccagtggaggatctggcttttgccgtggcgaggttcatacagaagggtggctctttcgtgaactattacatgtaccatggaggaaccaattttggccggacagctggtggtcccttcattgcaaccagctatgattatgatgctccgattgacgaatttggtctgcttaggcaaccgaaatggggtcacttgagagaccttcacagggccatcaagcaggctgagcctgtgctggtttctgccgatccgacaatagagtctattggcagctatgagaaggcatatgtcttcaaggcaaagaatggagcatgcgcggcgttcctgtcgaactaccacatgaacactgcagtcaaagtcaggttcaatgggcagcagtacaaccttcctgcttggtccatcagcattctgccggactgcaaaactgccgtcttcaacactgcaacggtgaaggagccaacattgatgccaaagatgaacccagtggttcgattcgcttggcagtcatatagcgaggacacaaactcgctgagcgacagcgcgttcacgaaggatggccttgttgagcagctgagcatgacatgggacaagtcagactacctgtggtacaccacatacgtcaacattggtacaaatgacttgaggtctggtcagtctcctcagctcactgtctactccgctgggcactcgatgcaggtgttcgtgaacgggaaatcatatggatctgtttatggtggttacgacaacccgaagctgacatacaatggacgtgtcaagatgtggcagggcagcaacaagatctccatcctaagttcagcagttggcctccctaatgttggcaaccattttgagaactggaatgtcggagtgctcggaccggtgaccctctccagcctaaatgggggcacaaaagacctcagccatcagaaatggacctatcaggtcggcctgaaaggcgaaacgctgggtctccacaccgtcaccggaagctccgcagtcgaatggggtggccctggcggctaccagccactgacttggcacaaggctttcttcaacgcgccggccgggaacgacccagtggcgctcgacatgggcagcatggggaagggccagctctgggtgaacggccaccacgtcggccggtactggtcgtacaaggcctccggtggctgcggcggctgcagctacgccgggacgtaccacgaggacaagtgccggtccaactgcggcgacctgtcccaaagatggtaccatgtgccgagatcatggctgaagccgggcggcaacctgctggtggtgctggaggagtacggcggcgacctcgccggcgtcagcctggcgacgagaaccacatga</cdnaseq>

Protein Sequence

<aaseq>KQDDAPDPVINTCNGFYCDYFSPNKNYKPSMWTEAWTGWFTSFG GGVPHRPVEDLAFAVARFIQKGGSFVNYYMYHGGTNFGRTAGGPFIATSYDYDAPIDE FGLLRQPKWGHLRDLHRAIKQAEPVLVSADPTIESIGSYEKAYVFKAKNGACAAFLSN YHMNTAVKVRFNGQQYNLPAWSISILPDCKTAVFNTATVKEPTLMPKMNPVVRFAWQS YSEDTNSLSDSAFTKDGLVEQLSMTWDKSDYLWYTTYVNIGTNDLRSGQSPQLTVYSA GHSMQVFVNGKSYGSVYGGYDNPKLTYNGRVKMWQGSNKISILSSAVGLPNVGNHFEN WNVGVLGPVTLSSLNGGTKDLSHQKWTYQVGLKGETLGLHTVTGSSAVEWGGPGGYQP LTWHKAFFNAPAGNDPVALDMGSMGKGQLWVNGHHVGRYWSYKASGGCGGCSYAGTYH EDKCRSNCGDLSQRWYHVPRSWLKPGGNLLVVLEEYGGDLAGVSLATRTT</aaseq>

Gene Sequence

<dnaseqindica>2888..2996#2230..2432#1895..2107#1697..1806#1508..1611#1244..1413#988..1152#787..905#549..636#349..454#166..254#2..28#caagcaggacgacgcccctgacccagtggtacactgataattgatagtagaaactggaaacaaactactccaccttccttggtggtgtcaaatgaatgagtttgttgtgcagttcactgtgccagactgcgagttcttacccttttttatccccaaccatggcagatcaacacttgcaatggattttactgcgactacttcagcccaaacaagaattacaagccgtccatgtggactgaggcctggaccggctggtaattttcttgttccaactcatgtcgcacttcataccatcctaatctgatgggaatgatcttactacggttttacattttactgcgcgtgaaggtttacatcgttcggaggtggggtgccgcatcggccagtggaggatctggcttttgccgtggcgaggttcatacagaagggtggctctttcgtgaactattacatggtgagaagagagggggctcactggtcacaccaacactggtgttgcagtgaatgtagttttacttgttctgaccgcatttcatgttctggtgcagtaccatggaggaaccaattttggccggacagctggtggtcccttcattgcaaccagctatgattatgatgctccgattgacgaatttggtatgcagtgattgccttctttgataaacttgaattcctgcctgccttcttgagatattttcggaaatttgctgttttttatcttctgtttataatcttgattgacatggatctgactcagttgataaacggatggcatgtacatctcaggtctgcttaggcaaccgaaatggggtcacttgagagaccttcacagggccatcaagcaggctgagcctgtgctggtttctgccgatccgacaatagagtctattggcagctatgagaaggttggtgttgctacaatcttgcacacaatatatgtgatcatccatagatattcctagattcataattggtcaaatcctttaggcatatgtcttcaaggcaaagaatggagcatgcgcggcgttcctgtcgaactaccacatgaacactgcagtcaaagtcaggttcaatgggcagcagtacaaccttcctgcttggtccatcagcattctgccggactgcaaaactgccgtcttcaacactgcaacggttagggaacactgaagcttgaacctttatgtggactagctggaccttgctggagcacatggtctaatgtacttacatgataatggcacaggtgaaggagccaacattgatgccaaagatgaacccagtggttcgattcgcttggcagtcatatagcgaggacacaaactcgctgagcgacagcgcgttcacgaaggatggccttgttgagcagctgagcatgacatgggacaagtcagactacctgtggtacaccacatagtgagtgaccaaccttgatatgtgacaaaatttcaaccatttctattagaagccatatgaattttcccttaaccctgatgaattcttgttgcagcgtcaacattggtacaaatgacttgaggtctggtcagtctcctcagctcactgtctactccgctgggcactcgatgcaggtgttcgtgaacgggaaatcatatggtactggcacttagctacatttcatgttagatcaagccaacaccaatcattttagtgaatgttcatgattttgcttcctccgtaggatctgtttatggtggttacgacaacccgaagctgacatacaatggacgtgtcaagatgtggcagggcagcaacaagatctccatcctaagttcagcagttggcctccctgtgagttgatcacagcttaactgatatcccggacacttatatcttgtctcaaactacctgtaacactgatatctgataccattttcagaatgttggcaaccattttgagaactggaatgtcggagtgctcggaccggtgaccctctccagcctaaatgggggcacaaaagacctcagccatcagaaatggacctatcaggtcggcctgaaaggcgaaacgctgggtctccacaccgtcaccggaagctccgcagtcgaatggggtggccctggcggctaccagccactgacttggcacaaggtaagtgctgaattctgaagaagcaccagcaatgacaaagtggaattacagtttcatcacgctcagactgaatttgtgtcacctgttgctgaatttccttttgtcaccattgattgtctcaggctttcttcaacgcgccggccgggaacgacccagtggcgctcgacatgggcagcatggggaagggccagctctgggtgaacggccaccacgtcggccggtactggtcgtacaaggcctccggtggctgcggcggctgcagctacgccgggacgtaccacgaggacaagtgccggtccaactgcggcgacctgtcccaaagatggtaataaattcagcctcacataaccatcttctcacacaactcaaattttctctgaacaataatttttagataatggaagttttatcgaggctcggtcaattacatcaagataatataatccaactgagtctgcccttagcttttgcataaaatgcacaaaaccaaaaaagaaccacaaaaaaccacatcccaagcacacaagtagagcagaaacacaaagattagtgactatcaatccatgctcaacaataataaaatgttttacaatgtttaaataacaaaaagaaagagacgtttataatagtgtctctgctactgtagtagaatcaattttaccactactcaattactattagtagaacgattttttttgcctcataaattaacgcttaagatcacttctattggggagagatcaccgtaaaatgtacctactattttggataaaatttcaggtaccatgtgccgagatcatggctgaagccgggcggcaacctgctggtggtgctggaggagtacggcggcgacctcgccggcgtcagcctggcgacgagaaccacatgaacgaattgcagcgagagatcatcaccaccatttgatacagtcgtcgacggccgcgtgaacagcttcctcctgtagcacgcagaattcgtcgatggtatttacacacacagacgaacaccttacaagt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0219200, RefSeq:Os02g0219200