Os02g0220500

From RiceWiki
Revision as of 02:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0220500| Description = Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Version = NM_001052852.1 GI:115445074 GeneID:4328752| Length ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0220500

Description

Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)

Version

NM_001052852.1 GI:115445074 GeneID:4328752

Length

3431 bp

Definition

Oryza sativa Japonica Group Os02g0220500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6745992..6749422

Sequence Coding Region

6746227..6746235,6747202..6747351,6747423..6747483,6747573..6747625,6747702..6747803
,6747882..6748371,6748696..6749075

Expression

GEO Profiles:Os02g0220500

Genome Context

<gbrowseImage1> name=NC_008395:6745992..6749422 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6745992..6749422 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcgtattgcatgctggcagtggaaacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggtgaagaactttcagatgggtgtctccaacaagacacctgagtttctcaagatgaatcctattgggaagattcctgttctagagactcctgatggtcctgtttttgagagcaatgcgattgcacgatatgttacccgctcgaaggctgacaacccactctatgggtcttcactgattgaatatgcccacatcgagcagtggaatgacttttcggccacagaggttgatgctaatattggaaaatggctctacccacggctaggaattgctccctatgttgctgtgagtgaggaagcagctattgctgctttgaagagatcattgggtgccctcaacacacaccttgcatcaaacacataccttgttggccattcggtgactcttgctgatattgtgatgacctgtaacctctacatgggctttgctcggatcatgaccaagagttttacttctgagttccctcatgttgagaggtacttctggaccatggttaatcagccaaactttaagaaagtcttgggtgatgtgaagcaggcagagtctgtcccaccagttcaaaagaaggctccaccaccaaaggagcagaagccaaaggaagccaagaaagaggctccaaaacctaaggcagttgagaaaccagaggaggaagaggaggcaccaaagccaaagccaaagaaccctcttgatttgctccctccaagcaagatgatccttgatgagtggaagaggttatactcaaacacaaaaacaaatttccgtgaggttgctatcaagggtttctgggatatgtatgacccagaaggttactccctgtggttttgtgactacaaatacaatgacgagaacactgtgtccttcgtgaccatgaacaaggttggtgggttcctgcagcgaatggacctgtgccgcaaatatgctttcgggaagatgcttgtgatcggctctgagccgccattcaaggtgaagggtctttggctcttccgtggccccgagatccccaagttcgtcatggatgaagtctatgacatggagctctatgagtggaccaaggttgacatctcagatgaggcccagaaggagcgcgtcagcgccatgattgaggacctggagccatttgagggcgagtcgttgctggatgcgaaatgcttcaagtga</cdnaseq>

Protein Sequence

<aaseq>MALVLHAGSGNKNAFKALIAAEYSGVKVELVKNFQMGVSNKTPE FLKMNPIGKIPVLETPDGPVFESNAIARYVTRSKADNPLYGSSLIEYAHIEQWNDFSA TEVDANIGKWLYPRLGIAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLAD IVMTCNLYMGFARIMTKSFTSEFPHVERYFWTMVNQPNFKKVLGDVKQAESVPPVQKK APPPKEQKPKEAKKEAPKPKAVEKPEEEEEAPKPKPKNPLDLLPPSKMILDEWKRLYS NTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMDLCRK YAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQKERV SAMIEDLEPFEGESLLDAKCFK</aaseq>

Gene Sequence

<dnaseqindica>236..244#1211..1360#1432..1492#1582..1634#1711..1812#1891..2380#2705..3084#gctgctacttccactagggtttcgtcttgcttctcccgctgctcgcctcgcctcctcgacggtaagatctccccgatttgcaacagctattgtgctcgcgcgattattgcttgttgcgaatcttgtttttgcggagttctttgatacatatgtaaaattttgtggtttcctcatgacgtgcagatctgagatcatcgagatcgattgagtggagctaggcggcggctagggcgagatggcgctcgtaagtgtgatctatccatgttacctgttcatgcttatcacgtgttgctacttgtgcgaattggtttgatttgtggggattaatagtgggaaagcttggcctgatgcggtggggggtttggttgttcatttcaaattatagcttgtgcgggttgttgtatagtctgctatgagaaaatctttttttctgcatgatcagggttgatttgatgcgcattgctacccagtgtttcgatctaggaagggtttttgtagggtgttgacaatttaggtgttcaggatttgacttggatcgttgacaatgttcggttatgtctagcatctctgattttcttcatgctggcttgcgagctcgttgatatcaatgatttctggtgttcttttactgttactttctggttcaagtgctggtggttgaagaagatttatggtgttctttactttgttactctctgcttctaatgctagtggatggagtgaattacttaatttgtagtaaggagctatgattttttttctgcactgtcatttttttctgattatctcattggataccaagtgttgcactattgccaaagtaagttcgtattcaatgcaagtaaatgagtgcccagtgtcatgccggcttgttaacattatactcgttatcctgcatagacatgcacagggttgatttcctagaacgcttagagctttttgtttgatgcaaatggattcatttacagtttccaaaatgtgttttatttgctttcagaatatctgatctcacgttgaccttatgtagctcagcacttctgcacataattatataattatttgcattgattatcgctatgcacaacattggaagctaaagttactttgtaatatatgcttcttgatctgtgaattggttcctctgcttgtatcgtttttgtttatcatgcttgtgtctccaaccttatgtacattattcgtctgtgattaggtattgcatgctggcagtggaaacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggtgaagaactttcagatgggtgtctccaacaagacacctgagtttctcaagatgaatcctattgggaaggtttgaacaaaaaccatccctgtattttggtacattcgcacagaatcttatttggacacgttttctttcagattcctgttctagagactcctgatggtcctgtttttgagagcaatgcgattgcacgatatggtaagtgatacatagcaaggaattggagttctcttaatctttttctatcatatctgatttagttctaagtcactgtcattttcctgaagttacccgctcgaaggctgacaacccactctatgggtcttcactgattgaatatgtgagtggtcttccatagatatttaagatcattcttgattattttacgagcttctagaattgtatgtttcttccaggcccacatcgagcagtggaatgacttttcggccacagaggttgatgctaatattggaaaatggctctacccacggctaggaattgctccctatgttgctgtggtaagtatggtcaagtgggtgtcatagtgttttccttgtgtcagcaatttgttgtctaatcttatttctgcccaacagagtgaggaagcagctattgctgctttgaagagatcattgggtgccctcaacacacaccttgcatcaaacacataccttgttggccattcggtgactcttgctgatattgtgatgacctgtaacctctacatgggctttgctcggatcatgaccaagagttttacttctgagttccctcatgttgagaggtacttctggaccatggttaatcagccaaactttaagaaagtcttgggtgatgtgaagcaggcagagtctgtcccaccagttcaaaagaaggctccaccaccaaaggagcagaagccaaaggaagccaagaaagaggctccaaaacctaaggcagttgagaaaccagaggaggaagaggaggcaccaaagccaaagccaaagaaccctcttgatttgctccctccaagcaagatgatccttgatgagtggaagaggttatactcaaacacaaaaacaaatttccgtgaggttgctatcaagggtaagtttcttttgggaatctagtagtcactaaaaggtttccacgtagaaaagtatagtttctttcgggaatctagtagtcactaaaaaggtttccacagagaaaagtttactacattgctgtgagtacactagaaagatatgagtacaaattggcttacaaattataacagctactaaagagtcaatgcaaatttgtttgttgacctgtcaactgttagcaagttatatctctttgattaccattatttgtcatctgctcccaacttctgttgtgtatgaagttctgtgaattgaactcaacatgtcttctcacttattgcaggtttctgggatatgtatgacccagaaggttactccctgtggttttgtgactacaaatacaatgacgagaacactgtgtccttcgtgaccatgaacaaggttggtgggttcctgcagcgaatggacctgtgccgcaaatatgctttcgggaagatgcttgtgatcggctctgagccgccattcaaggtgaagggtctttggctcttccgtggccccgagatccccaagttcgtcatggatgaagtctatgacatggagctctatgagtggaccaaggttgacatctcagatgaggcccagaaggagcgcgtcagcgccatgattgaggacctggagccatttgagggcgagtcgttgctggatgcgaaatgcttcaagtgaggcgtcgttggagcaaggataccgtggaaaatgagctatttaggttttggatttacccttctacaatagttcatgattatgaaaaaaaaaatactatcaccatgtggctatattagtcaatattgagtgtgctggtcttttctttttgtactgtttgctagagttttggccctttttaaccttgtagttaagttgttaagacacttatccatcgaatcatcgtcagaaacacaccattcgaatctgctgttgctcatgtgttaaacttgccattctgataatgttttggaaataggcaacaaaacgagttatggtgctgggttattttatgtattttattctgttgt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0220500, RefSeq:Os02g0220500