Os02g0220600

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Revision as of 02:20, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0220600| Description = Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)| Version = NM_001052853.1 GI:115445076 GeneID:4328753| Length ...")
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Gene Name

Os02g0220600

Description

Elongation factor 1-gamma (EF-1-gamma) (eEF-1B gamma)

Version

NM_001052853.1 GI:115445076 GeneID:4328753

Length

4028 bp

Definition

Oryza sativa Japonica Group Os02g0220600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:6750988..6755015

Sequence Coding Region

6751232..6751240,6752262..6752411,6752482..6752542,6752632..6752684,6752833..6752934
,6753011..6753512,6754301..6754680

Expression

GEO Profiles:Os02g0220600

Genome Context

<gbrowseImage1> name=NC_008395:6750988..6755015 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:6750988..6755015 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgctcgtattgcatactttcgatggaaacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggcaaagaactttcagatgggtgtctccaacaagactcctgagtatctcaagatgaatcctattgggaaggtccctattctagagactcctgatggtcctgtttttgaaagcaatgcgattgcacgatatgttactcgctcgaagtctgacaacccactctatgggtcttcactgattgaatatgcccacattgagcagtggattgacttttcagccacagaggttgatgctaatactggaaaatggctcttcccacgtcttggatttgctccttatgttgctgtcagtgaggaagcagctattgctgctttgaagagatcattgggtgccctcaacacacaccttgcatcaaacacataccttgttggccattcagtgactcttgctgatattgtgatgacatgcaacctctacatgggctttgctcggatcatgaccaagaattttacttctgagttccctcatgttgagaggtacttctggaccatggttaaccagccaaactttaagaaagtcatgggtgatgtgaagcaggcagattctgtcccacaagttcaaaagaaggctgcagcaccaaaggagcagaagccaaaggaagccaagaaagaggccccaaaagaagctccaaagcctaaggcagctgagaaaccagaggaggaagaggaagcaccaaagccaaagccaaagaatcctcttgatttgctccctccaagcaaaatgatccttgatgagtggaagaggttatactcaaacacaaaaacaaacttccgtgaggttgctatcaagggtttctgggatatgtatgacccagaaggttactccctgtggttctgcgactacaaatacaatgatgagaacaccgtgtccttcgtgaccatgaacaaggttggtgggttcctgcagcgaatggacctgtgccgcaaatatgccttcgggaagatgcttgtgatcggctctgagccgccattcaaggtgaagggtctttggctcttccgtggccccgagatccccaagttcgtcatggatgaggtctacgacatggagctctatgagtggaccaaggttgacatctcagatgaggcccagaaggagcgcgtcagcgccatgattgaggaccttgagccatttgagggcgaggctttgctggatgcgaaatgcttcaagtga</cdnaseq>

Protein Sequence

<aaseq>MALVLHTFDGNKNAFKALIAAEYSGVKVELAKNFQMGVSNKTPE YLKMNPIGKVPILETPDGPVFESNAIARYVTRSKSDNPLYGSSLIEYAHIEQWIDFSA TEVDANTGKWLFPRLGFAPYVAVSEEAAIAALKRSLGALNTHLASNTYLVGHSVTLAD IVMTCNLYMGFARIMTKNFTSEFPHVERYFWTMVNQPNFKKVMGDVKQADSVPQVQKK AAAPKEQKPKEAKKEAPKEAPKPKAAEKPEEEEEAPKPKPKNPLDLLPPSKMILDEWK RLYSNTKTNFREVAIKGFWDMYDPEGYSLWFCDYKYNDENTVSFVTMNKVGGFLQRMD LCRKYAFGKMLVIGSEPPFKVKGLWLFRGPEIPKFVMDEVYDMELYEWTKVDISDEAQ KERVSAMIEDLEPFEGEALLDAKCFK</aaseq>

Gene Sequence

<dnaseqindica>245..253#1275..1424#1495..1555#1645..1697#1846..1947#2024..2525#3314..3693#actgtttttgctgccgctgctacttcttccactagggttcgtcttgctgctccctccactgctcgcctcgcctccgccaccgtaagatctccccgattcgctacaactaactagtgtgcttgcgccattgttgcgtactgttgattttgcggatttttttttaaatttttttggatttttgtttcctcatgatgtgcagatctgaaatcgagtgagtgggagctaaggcggcggccccgtcgagatggcgctcgtaagtgattcttgatctaacctcgtttgctcgtgttctttagttgatttagtggagaagcttggcatgatgcggtggggtgtagttttttttttttcattttcaaattgtagcatctgtggattgctgtatgagtcttctgtaaagcatatcgtttttttctgcacgatcagggttgatttggtgcgcatttctacccagcatttagggagggttttggtagggtggtgacagtttaggtgtcacggattttatttagatcggtggacaatgttcggtctatgtctagcatctcttatttacttaatgttgtcttgcaagctcgttgaaatgcagatttctggtttttttttttactttgttactttctggttcaaatgctggcggatcaagtgaatattaaataatttgtgcagtgaggaagcaaggacctgccttcgaaatttttctagtctatatttctgattatttgatcccaagtgttaaagattgttgccaaggttttccaatagttagcctttcttatatacatttgatgatgtaagaccaaattcaaatgcatacaaatgaaagcctgatcacatgacagtttgttgacaatatatacattatcctgtagagattcgcacagggctctgctttcctagaatgcttacagcttcctgtttgatgcaaatgggattatttggagtttcggaaatgaagtcttattcgctttctgaatagccgatgagcatgtagacatgtctcatgcagacattatagctcagcacttgtgcacataattatataatatgtatgtattgaccatcactctgtagaacattgaatggctaaagtcactgtgtaatatgtgctgcttgatctatgaatttgtcccgttgtttgtatattttttgtttatcatgtttgtgtatccatccttatggacatgctagtcaaactgtccttgtagtgttgtcatgtcatgcacttccctaacctattttcacgctcaactttgtaacttgcattggtgtaggtattgcatactttcgatggaaacaagaatgcattcaaggcactcattgctgccgagtactctggtgtcaaggttgagttggcaaagaactttcagatgggtgtctccaacaagactcctgagtatctcaagatgaatcctattgggaaggtttgagcaaaaccacctctgaattttggtacatttgcacagaatctgatttggacacgtttcctttcaggtccctattctagagactcctgatggtcctgtttttgaaagcaatgcgattgcacgatatggtaagtgatacatagcaaggattccgttcttttaatccttttctctctattgcttgatttagttctaagttcctctcattttcctgaagttactcgctcgaagtctgacaacccactctatgggtcttcactgattgaatatgtgagtgatctttcataaatatttaggatcattcttgattattttccagctcctagaattttgtgtttctttcaggttgatctttcatagacatttaggatcattcttgattattttaccagctccttgaatttcttgtttctttcaggcccacattgagcagtggattgacttttcagccacagaggttgatgctaatactggaaaatggctcttcccacgtcttggatttgctccttatgttgctgtcgtaagtatggtcaagtgggtatcgttgtgttctccttgttagcaatttgtgatctaatcttgtttctgcctaacagagtgaggaagcagctattgctgctttgaagagatcattgggtgccctcaacacacaccttgcatcaaacacataccttgttggccattcagtgactcttgctgatattgtgatgacatgcaacctctacatgggctttgctcggatcatgaccaagaattttacttctgagttccctcatgttgagaggtacttctggaccatggttaaccagccaaactttaagaaagtcatgggtgatgtgaagcaggcagattctgtcccacaagttcaaaagaaggctgcagcaccaaaggagcagaagccaaaggaagccaagaaagaggccccaaaagaagctccaaagcctaaggcagctgagaaaccagaggaggaagaggaagcaccaaagccaaagccaaagaatcctcttgatttgctccctccaagcaaaatgatccttgatgagtggaagaggttatactcaaacacaaaaacaaacttccgtgaggttgctatcaagggtaagtttcttttttggaatctactagtcagtaaaaagtttccagatagacaaatttattgcattgctttgttgcaaaggatatgaatacaaattaggatacccgttagaatttgtttgtgtagcatcataaatagcaagcatgcatgtgactttttttagatgttatatgttgttagttacttttcaactgtgaactagctagctgtccaggatcagctgaaggcctggagttgttgcttttactgcaacttcagcagtcatcacatccagtaatccaacaagcaaccaatggctagaccaagagcatctcttttcctttctttctttatcgaatatttccaaaaccatgaaatcaatgaaacagaaaattaataaaaatattaagttggactataaataaaaaaacgccttgttttcagaactttaaaaaatgacactgttaactatgctattcttgtgtcaatttgtatctcaaacattctagtttagagaaaattaacatcttagctagagaattatagcatgcaaaaactgttagcctcttgttgttggatggagaaaattaacatcttagttagagaagatgctcaacatcttagcccattggtggcttgatggatggctatatgtgttgactgctaaagttgcagtcaaaacaactacctcagctgatcctgatctgtcaattagttctctcttctacaccattatttctcatctacaccaacttctgttgagtttgaactgctgtgaattgtactcaagttatcttctcatgtattgcaggtttctgggatatgtatgacccagaaggttactccctgtggttctgcgactacaaatacaatgatgagaacaccgtgtccttcgtgaccatgaacaaggttggtgggttcctgcagcgaatggacctgtgccgcaaatatgccttcgggaagatgcttgtgatcggctctgagccgccattcaaggtgaagggtctttggctcttccgtggccccgagatccccaagttcgtcatggatgaggtctacgacatggagctctatgagtggaccaaggttgacatctcagatgaggcccagaaggagcgcgtcagcgccatgattgaggaccttgagccatttgagggcgaggctttgctggatgcgaaatgcttcaagtgaggcgtcgttggagcaaggataccgtggaaaaatgagctatttaggttttggatttaccgttcgaaaatagttcatgattctgaaaaagaaaacactatcagcttgtggttatattagtctatattgagtgtgctctcgtttctgtgtgctgtttttaagagttttggcccttctatcttgtagttcttagttgttaaagacactatccatcgaatcatcatcggaaacacaccattccttgtgaatcggctgctgctcatatgataaacttggcaattctgatgttttcgaattgttatgcaagtaaaagaggtacagtgatgttcatgtttgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0220600, RefSeq:Os02g0220600