Os10g0400500

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Revision as of 08:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0400500| Description = Similar to Tyrosine decarboxylase 1 (EC 4.1.1.25) (ELI5) (Fragment)| Version = NM_001071078.2 GI:297610448 GeneID:434...")
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Gene Name

Os10g0400500

Description

Similar to Tyrosine decarboxylase 1 (EC 4.1.1.25) (ELI5) (Fragment)

Version

NM_001071078.2 GI:297610448 GeneID:4348564

Length

2189 bp

Definition

Oryza sativa Japonica Group Os10g0400500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13881138..13883326

Sequence Coding Region

13881138..13881146,13881857..13883326

Expression

GEO Profiles:Os10g0400500

Genome Context

<gbrowseImage1> name=NC_008403:13881138..13883326 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13881138..13883326 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtagcttgccactcgacgcgctccagccactggacccggacaccttcgccgccgactcctccgccgtcgtcgacttcctcgccggctactaccgcgacgtcgacaagtaccccgtccgcgccgccgacctcgagcctggccgcctccgcaggctcctcccggaggccgcgccggagttcggggagccggcggagcggatcctcgctgacgtgcgccgcgacgtgctcccggggctcacgcactggcagagccccagcttcttcgcctacttcccgatgaacgccagcgccgccgggttcgccggcgagatgctctccgtggggctcaacgtcgtgccgttcatgtgggttgcgtcgccggctgccgtggagctggaggccgtcgtggtggactggatggctaggctggtgggcttgcctgatcgcttcctcttctccggctccggcggcggcggcggcggcggtggcggtggtgttctgcaggggagcacctgcgaggccgtggtgtgcacgctcgccgccgcgcgggaccgcgcgctggggaggattgggcacgagggcatcgtgaagctggtggtgtacgcctccgaccagacgcacgccacgttccagaagggcgcgcggctggtcggcatcacgccggcgaacttccgcgtcgtcccgacggcggcggcgtcggggtacgcgctgacgggcgccgccgtgcgcgccgcggtggagggcgacgtggcgcgcgggctggtcccgctgtacctgtgcgccactgtgggcaccacggggatcggcgccgtcgaccccgtccgcgagctcggcgaggtggcgcgccgccacggcatgtggctccacgtcgacgccgcgtacgccggcagcgcggcgatctgcccggagtaccagggctacctcgacggcgccgagctcgccgactcggtgagcatgaacccgcacaagtggttcctcaccaacatggactgctgctgcctctgggtggcgagccccgccgcgctcaccgccgcgctgtccaccgacccggagtacctcaagaacgccggcggcgggaagccccaggccgccgccggcgccggcgccatcgactacaaggactggcagatctcgctgtcgcggcggttccgcgccatgaagctctggttcgtgctgcggcggtacggcgctgcgggcatgcgcgcgcacatccggcgccacgtcgccatggccgagtggttcgagcgcgcggtgagcgccgacgagcggttcgaggtggtggcgaagaggaggttctccctcgtgtgcttccgcctccgcggcggcggcggcggcggcgacgcgatgaaccgcgagctcctggcggcggtgaacgcgagcgggcgggcgttcatgacgcacttcgtggtggagggcaagttcgtgatccggctcgccgtcggcggcgccatgacggagatgaggcatgtcggcgacgcgtgggagctggttcgctaa</cdnaseq>

Protein Sequence

<aaseq>MGSLPLDALQPLDPDTFAADSSAVVDFLAGYYRDVDKYPVRAAD LEPGRLRRLLPEAAPEFGEPAERILADVRRDVLPGLTHWQSPSFFAYFPMNASAAGFA GEMLSVGLNVVPFMWVASPAAVELEAVVVDWMARLVGLPDRFLFSGSGGGGGGGGGGV LQGSTCEAVVCTLAAARDRALGRIGHEGIVKLVVYASDQTHATFQKGARLVGITPANF RVVPTAAASGYALTGAAVRAAVEGDVARGLVPLYLCATVGTTGIGAVDPVRELGEVAR RHGMWLHVDAAYAGSAAICPEYQGYLDGAELADSVSMNPHKWFLTNMDCCCLWVASPA ALTAALSTDPEYLKNAGGGKPQAAAGAGAIDYKDWQISLSRRFRAMKLWFVLRRYGAA GMRAHIRRHVAMAEWFERAVSADERFEVVAKRRFSLVCFRLRGGGGGGDAMNRELLAA VNASGRAFMTHFVVEGKFVIRLAVGGAMTEMRHVGDAWELVR</aaseq>

Gene Sequence

<dnaseqindica>2181..2189#1..1470#atgggtagcttgccactcgacgcgctccagccactggacccggacaccttcgccgccgactcctccgccgtcgtcgacttcctcgccggctactaccgcgacgtcgacaagtaccccgtccgcgccgccgacctcgagcctggccgcctccgcaggctcctcccggaggccgcgccggagttcggggagccggcggagcggatcctcgctgacgtgcgccgcgacgtgctcccggggctcacgcactggcagagccccagcttcttcgcctacttcccgatgaacgccagcgccgccgggttcgccggcgagatgctctccgtggggctcaacgtcgtgccgttcatgtgggttgcgtcgccggctgccgtggagctggaggccgtcgtggtggactggatggctaggctggtgggcttgcctgatcgcttcctcttctccggctccggcggcggcggcggcggcggtggcggtggtgttctgcaggggagcacctgcgaggccgtggtgtgcacgctcgccgccgcgcgggaccgcgcgctggggaggattgggcacgagggcatcgtgaagctggtggtgtacgcctccgaccagacgcacgccacgttccagaagggcgcgcggctggtcggcatcacgccggcgaacttccgcgtcgtcccgacggcggcggcgtcggggtacgcgctgacgggcgccgccgtgcgcgccgcggtggagggcgacgtggcgcgcgggctggtcccgctgtacctgtgcgccactgtgggcaccacggggatcggcgccgtcgaccccgtccgcgagctcggcgaggtggcgcgccgccacggcatgtggctccacgtcgacgccgcgtacgccggcagcgcggcgatctgcccggagtaccagggctacctcgacggcgccgagctcgccgactcggtgagcatgaacccgcacaagtggttcctcaccaacatggactgctgctgcctctgggtggcgagccccgccgcgctcaccgccgcgctgtccaccgacccggagtacctcaagaacgccggcggcgggaagccccaggccgccgccggcgccggcgccatcgactacaaggactggcagatctcgctgtcgcggcggttccgcgccatgaagctctggttcgtgctgcggcggtacggcgctgcgggcatgcgcgcgcacatccggcgccacgtcgccatggccgagtggttcgagcgcgcggtgagcgccgacgagcggttcgaggtggtggcgaagaggaggttctccctcgtgtgcttccgcctccgcggcggcggcggcggcggcgacgcgatgaaccgcgagctcctggcggcggtgaacgcgagcgggcgggcgttcatgacgcacttcgtggtggagggcaagttcgtgatccggctcgccgtcggcggcgccatgacggagatgaggcatgtcggcgacgcgtgggagctggtgcagcgcacggcggagcagctgctgcagcgccggtagcttgggaaactattttcaaaattttttaaaaaaacttggcatgataacatgtcgtttcacaaacaaaatttaaattcaatttacacaagtagaaacaaaaataacaaatttgactgaatttgttattttcgtttctaatatatatgataaattttaatttatatgtttgtaaaatgaaatattttatattgatatatcatattaattgtttttaaattgttttgataactttcagggggacacgtaaaaacgaggatgaaaatccacttccctggtagcttagctagcacgtgtgcactactgtccagtgtctggttggttttgtgggtcatatgtattagtggtgcaaaactgcaaagtagtactgtctccgtcccaaaatacttgtcattctaggttgtttagcatatgctaagattagaagaaaaaactataatacccttaatacaatattatatagttagaagtagaatggtggttggaggtatgatgggaagaaatttgaattggaagtggttgatgagacaagtactatttgcaagtgtcaattattttgggataaattttgaatgccaaaaagacaagtattatgcgacggaggaagtagtagtagtaataactgaagtaattaatctggcttcttaattatttgggtactgtacaattttcaggttcgctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0400500, RefSeq:Os10g0400500