Os02g0230100

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Revision as of 02:21, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0230100| Description = Leucine-rich repeat, SDS22 containing protein| Version = NM_001052899.1 GI:115445168 GeneID:4328803| Length = 3089 b...")
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Gene Name

Os02g0230100

Description

Leucine-rich repeat, SDS22 containing protein

Version

NM_001052899.1 GI:115445168 GeneID:4328803

Length

3089 bp

Definition

Oryza sativa Japonica Group Os02g0230100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7345399..7348487

Sequence Coding Region

7345462..7345746,7346332..7346562,7346673..7346819,7346902..7347044,7347167..7347281
,7347840..7347920

Expression

GEO Profiles:Os02g0230100

Genome Context

<gbrowseImage1> name=NC_008395:7345399..7348487 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:7345399..7348487 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtccggcgatccggtggacgcgccggcggcggcggcggagtcgatggaggtggaggcggaccagtgcctcgacctgacgagctgccagctgcacgatctgagcgaggtggagatcccgcccaccctggaggagctcgaactcacggcgaaccgcctcgccgccgtcgacccccgcatcggccgcctcccgggcctccgcaagctctccttccgccagaacctcctcgacgacgccgccgtcgcgcccctctccacctgggccgacatcgctgggctgcaggagttggtctttagagataacaaacttacaacgattcctgatgccagcatcttcaaaggccttctggtctttgatgtatctttcaatgagatatcttccttaaaggggctgtccaaggtttccagcacactgaaggaactctatgtttcaaagaatgaagttgcaaagatggaggaactcgaacactttcatgcattacaaattcttgaacttggtagcaacagattgagggtgatggaaaatctagaaaccttggcaaatctgcaggagctatggctgggaagaaatcgaataaagacaatcaacctatgtagtttgaaagcaataaaaaaattaagcttgcaaagcaacagactgacttcaatgaatgggttacaagaatgtattgcactagaggaactatacctcagtcataatggaatacaaaagatggagggtctctctaccttgcagaaccttcgtgttttagatgtttcatccaacaagctaactgctatcgaagatgttgaaaccttaagcaggttggaggacttgtggttgaatgacaaccaaataccatcactagatgggatagaatctgctttggctagttcacgggagaagctgactaccatatatcttgagcggaatccttgcgcaaaagctccaaactattcatccacgttgaagacaatatttccaaatcttgagcaactcgattcagatatgctagcatga</cdnaseq>

Protein Sequence

<aaseq>MASGDPVDAPAAAAESMEVEADQCLDLTSCQLHDLSEVEIPPTL EELELTANRLAAVDPRIGRLPGLRKLSFRQNLLDDAAVAPLSTWADIAGLQELVFRDN KLTTIPDASIFKGLLVFDVSFNEISSLKGLSKVSSTLKELYVSKNEVAKMEELEHFHA LQILELGSNRLRVMENLETLANLQELWLGRNRIKTINLCSLKAIKKLSLQSNRLTSMN GLQECIALEELYLSHNGIQKMEGLSTLQNLRVLDVSSNKLTAIEDVETLSRLEDLWLN DNQIPSLDGIESALASSREKLTTIYLERNPCAKAPNYSSTLKTIFPNLEQLDSDMLA</aaseq>

Gene Sequence

<dnaseqindica>64..348#934..1164#1275..1421#1504..1646#1769..1883#2442..2522#tttctcgccttcttcagtccgcggcgttgttccagaagcttctggaaagtcggggaaacccccatggcgtccggcgatccggtggacgcgccggcggcggcggcggagtcgatggaggtggaggcggaccagtgcctcgacctgacgagctgccagctgcacgatctgagcgaggtggagatcccgcccaccctggaggagctcgaactcacggcgaaccgcctcgccgccgtcgacccccgcatcggccgcctcccgggcctccgcaagctctccttccgccagaacctcctcgacgacgccgccgtcgcgcccctctccacctgggccgacatcgctgggctgcaggtggttgtgatttccgtctctctatttgggaatctagggatttaggaatgtgtggttgcgccagtccttttggggctcgtgcgatcgtaataatgctcttgtttacccaattataagcttgtgtaaaccatttctgctatttcttttattaaagcaacaacctttttttgttgcagttacatcatgacacagaggatttctgtaagaaaagaactctataaattgtgcctttagatatacttggttaggtaaatatgtataccgtatacatattgaggtgatcaattcggccatgtttccttgtttcaaccagtaacaagtacaggtagctagagtaaactacatctatatgaaaaaaaattatatgatttagaaatggtgtatgacttgtccacattacatctatcctgaaaatacaaacagacctaacatgttatactaaatacatttatcgtggtttcaaagtgattaatcgcataaagttttttcttcaacttggtattacttctccaatgtcacagtgcggaattcatgtgttgtcaaaataatttgataataatatctgaaaaacatcccctgtttcaggagttggtctttagagataacaaacttacaacgattcctgatgccagcatcttcaaaggccttctggtctttgatgtatctttcaatgagatatcttccttaaaggggctgtccaaggtttccagcacactgaaggaactctatgtttcaaagaatgaagttgcaaagatggaggaactcgaacactttcatgcattacaaattcttgaacttggtagcaacagattgagggtaagcagtttgcagtgcattttaagttccaccagccagtcaagttagtcagatttgatgtataatgatgcattgtgtacatgcattcttacttatctactgaatttcaggtgatggaaaatctagaaaccttggcaaatctgcaggagctatggctgggaagaaatcgaataaagacaatcaacctatgtagtttgaaagcaataaaaaaattaagcttgcaaagcaacagactgacttcaatgaatgggttacaagtactgtgacattactttctctcatcccctgattttcttgtgaagcgctacttgataaccagtccattgttctcttattcaggaatgtattgcactagaggaactatacctcagtcataatggaatacaaaagatggagggtctctctaccttgcagaaccttcgtgttttagatgtttcatccaacaagctaactgctatcgaagatgttgaaaccttaagcaggtaacactgtttacacttagcagattgcttctcaccctcggagacaaaaaaaaaaaaagtaaacagcataaccaaaaaattggttctgactcctttcggtaccatcctcactggccatgcaggttggaggacttgtggttgaatgacaaccaaataccatcactagatgggatagaatctgctttggctagttcacgggagaagctgactaccatatatcttgagcggaatccttgcgtaagtactgcaattcttatgtagttagtcatcaactgttcttgtaaattgaaatttggtaataatctgaaagatgaacagaactgggaataagcaaggagccttctccacgcagggccaagataacacaatcgtattactatatttgctccccagcttctgatgaatttaaccacatatgattcatcaactgtgaaagcctttcatcatttagtggcttccaaacaactccatttattttattttgaatggaaagttacatcagagtgtcgtcattgcttgaatttgcattcatccttgatttcccacgaatctttgtaatcgtgctacagttgaaatttaactaccaacaatttgtttatcgaagtacaaacataatagctaggatgttattgagcttgaatagtctgtactataaactctgttatgctagtcagattagacaaaataatttctgttggtttttaagaaatgcatgtacattccatgtatatttactattgtccagtgctatgttgagattgaattgtcattgcctatgtcttttcatttttgcaggcaaaagctccaaactattcatccacgttgaagacaatatttccaaatcttgagcaactcgattcagatatgctagcatgaaactgatgtccttctgtgaagatagggaagacactcctggagtagctctactagcgttgttttttctaacaatcaaagcgtgagaagccttccagttcaagaacaagtaataataaaccatggatgaagcaatgcaacattattgtgctcaatatctaaattgcttcacctttttttcctgctccatgttctgatgctgttactggatggatcatcgtgggcttgtctttgtcaaactatactcccatatacagagatcaaggaaggtgagttagagaggtagagcgtgtgggactgaatgataaaccaataaaacctagcgaactgatgtttttgacagatgatgttgcatttgactattctgtcacaggatgttgcatttgatattacctgtactatgttgacatgtatgctattgcatttgctgtagatgtctgagattgattcaagtttatgaaagcagcacacatttgaatgtttatggcttaacttataagcatgtgcaaccgttccggttattctggttgctgtcatatgcagtaaagttttattcatgatgaatctatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0230100, RefSeq:Os02g0230100