Os02g0234800

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Revision as of 02:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0234800| Description = Similar to U2 small nuclear ribonucleoprotein A' (U2 snRNP-A')| Version = NM_001052918.1 GI:115445206 GeneID:4328823|...")
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Gene Name

Os02g0234800

Description

Similar to U2 small nuclear ribonucleoprotein A' (U2 snRNP-A')

Version

NM_001052918.1 GI:115445206 GeneID:4328823

Length

4242 bp

Definition

Oryza sativa Japonica Group Os02g0234800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7659948..7664189

Sequence Coding Region

7660182..7660187,7660283..7660447,7660541..7660591,7660855..7661028,7661782..7661987
,7662077..7662206,7663726..7663766,7663886..7663967

Expression

GEO Profiles:Os02g0234800

Genome Context

<gbrowseImage1> name=NC_008395:7659948..7664189 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:7659948..7664189 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgaggctcaccgccgacctgatatggaagagcccgcacttcttcaacgccgtcaaggaccgcgagctcgacatccgaggtaacaagatccccatcatcgagaatctgggcgccaccgaggaccaatttgacacaattgacttgtcagacaatgagattgtcaagcttgagaacttcccgtacttgaatcgtcttggcactctgttagttaacaataacagaatcacacgtatcaatcccaatcttggtgagttcttgccaaagttacatacattggtgcttacaaacaatcgtcttacaaatcttgcggagatcgatcccctggcatctcttccaaagcttcagtttcttagcttacttgataatactgtaaccaagcagccagactaccggttgtatgtgatccataaattgaagcatttgcggttgctggatttcaagaaagtgaaacaacaggagagaattgcagcagcacagaagtttcactcaaaggaggcagaggaagaggcaaagaaggtgccagccaaaacttttactcctggacaggtggtggatgctcaagataccacaatggaggagcagggtccaaaagtagttgctccaacacctgagcaaatcacagctatcaaggctgccattgtgaattctcagacacttgaggaggttgcaaggcttgaaaaggcactgagcactggccaaattcctgctgaatttgcaatccccaagccagatgctaatatggctgatgcttcagaggaaactgaaaagatggagacagatggtcagaaccaagaaaatggggcggatgagaagaagcaaaatgaagaaagcaccccaattgaagaggattga</cdnaseq>

Protein Sequence

<aaseq>MVRLTADLIWKSPHFFNAVKDRELDIRGNKIPIIENLGATEDQF DTIDLSDNEIVKLENFPYLNRLGTLLVNNNRITRINPNLGEFLPKLHTLVLTNNRLTN LAEIDPLASLPKLQFLSLLDNTVTKQPDYRLYVIHKLKHLRLLDFKKVKQQERIAAAQ KFHSKEAEEEAKKVPAKTFTPGQVVDAQDTTMEEQGPKVVAPTPEQITAIKAAIVNSQ TLEEVARLEKALSTGQIPAEFAIPKPDANMADASEETEKMETDGQNQENGADEKKQNE ESTPIEED</aaseq>

Gene Sequence

<dnaseqindica>4003..4008#3743..3907#3599..3649#3162..3335#2203..2408#1984..2113#424..464#223..304#atctcctttgccgccgctgccgccgcctcgccatcccgagcgagcatgcggccgccctcctccacctcctcccctcgccgccttcccgtttgctagggctccggccgccttgccgttccttcccctcctcgtcatcactagggtttcgacctcgcgccgcgggggagtttgtagcccgactgacccgaagctgttgccgccgcccgccctcccggccgcgccatggtgaggctcaccgccgacctgatatggaagagcccgcacttcttcaacgccgtcaaggaccgcgagctcgacatccgaggtttgcgcgctctttcctccctgctcgctagatctagggtttagtgttcttggccctcttttttcattccctccgtctcggtagtttaatttgtctgttgtgtttcttttccttggcaggtaacaagatccccatcatcgagaatctgggcgccaccgaggtgagctccaccagcttccgcaagccttttcttcccttagctccattgttgtctcatttgaagtattatgatgggttcttggattggtggtggaacatgctttactcttggatgtagcgtatgggagattagtagatatgggtgtgccctaggtagtgatgcaagaaatgtagtacataatgctactaagttcgtagcgtcaattttgtgttaataaagctgcaattgaagtgttttgcaaaataattttacaaaattcggggcactgcattttgtctctacatgctgacgataggtatgagagattactaacatatgagtgtgcccttctcttctttttggcattttgttgaggttctgccatggttgttaagttgtaaagtcgggttgagataccgtctactgggtagtagactggtcggagcatagttgaggactagtcgttgagttgactactctatcaggttgttattacatacatagattgcttctacttctagtctgttactagtaacttgctgcgcctgatggacccaatgagctctcaatctccctttcactcagcagggcctgataggccaaggcaccaggcctcccaagcattcgctcaagtctcaactccattgcgtcttctgcggccagcacatggagtcgtgccccctcaagtcgtgttccctcaaagactttaggactaactgtagcaccagtcgtcactttttgtaggacttgataactgtcggctctgcatgtttctattctatggatgtttagaggaaataagtcccacatgagtctggaagaactttttttttcttttgctgatagagctatcttatatgtacaatgtgtccatagaatttctaatcgttagcatgctaacggcatactttttgttgttatgagtgacacatttcttggttttcctttctcatgtcaatcacctatagttagataatcagtatggtcaattttatctttttcgatctctggaatggaataaaactcatattctcagttgagtatgtgttaacaacgctgcgatttgaagtgctttgcataataattttacaaaatttggggcattaaaatttgtctgtacatgctgacgctaggtagcttagcacttctcttctttttggcaattttttgaggttctgcatgtttttcttctatggaagtttagaggaaataagtcccacacattgttttttgctgatagagctgtcttttagtgttttttgctgatagagctgtcttttagttgtacaatgtgcccatgtaatttcaaagcattagtatgttaacggcatactttctgttgttatgaatgacatgtttcttggttttcctttgtcatgtcaatcacttgatagttaaataactagtatggtcattttgatctgatttgatatcccaaaaaatactcattctcatttcagtatttgacccagcttttgttttattatcttctttctccagcatgtttaacacttctttttgttactttgctctcaaataggaccaatttgacacaattgacttgtcagacaatgagattgtcaagcttgagaacttcccgtacttgaatcgtcttggcactctgttagttaacaataacagaatcacacgtatcaatcccaatcttggtggtaagattatatattttatcttgttatgatctgtttatcattttcataattttgctccagaacttaccttcagttgctcctgtttctagagttcttgccaaagttacatacattggtgcttacaaacaatcgtcttacaaatcttgcggagatcgatcccctggcatctcttccaaagcttcagtttcttagcttacttgataatactgtaaccaagcagccagactaccggttgtatgtgatccataaattgaagcatttgcggttgctggatttcaagaaagtgaaacaacaggttagcaatgctgaggttctttttcatgtaaatatgtttttgtatgaaatttgttaatcatttagtcttagttttgttctcttgaagtttctgtaaaaacttctattttgaatggtttatttttatttaaatttctcagtattttcttccatttgatctctaatggtagtttctagcactaaacagtaaacacctttcgtttagctctatgtgcaatggtgcttctgtgaactctctttatatcaatgtttcataagttaatcgcttcttatttttaaatgtttaatggagccataaaatacatattgtgatattttgcatgtattgacataacactcattaaggttgcatgttttatttatgcaagtatgtagcatacgattatttcaaaggagttcaaaattaaacagcattgcaagcctatatagtttatattattgtacatatatttttttcacaaaggcattttgaaatatgtggatctatgcagaaactgcgttgctgcttgattagtttacttattccccacaggttgttcattcatttcctttggaatgactgccaaaatgattttggaatggactgcagaagtgctggcaggaaaaagggcaaaagagcgactctttaactttgtgtcgcaatgaattaaatacatgaatgccttttagtttacgtgttatttttaatattatctagtgtgcatgtatttgtgttaatttctgaagttatgcgtgagatcttttgtttttgtaggagagaattgcagcagcacagaagtttcactcaaaggaggcagaggaagaggcaaagaaggtgccagccaaaacttttactcctggacaggtggtggatgctcaagataccacaatggaggagcagggtccaaaagtagttgctccaacacctgagcaaatcacagctatcaaggtactattgcaagctgtgcaaataactatattatttagctactgcattaaaaaaatgattgtggctatggcttctactggcttgttagtatgctcttgatttttaactttgataattctaaactctaactgtttgtagttagtgtggcatttggcattcctagatatgtgtatggctctctgttgatgtcaatatcttctatgtatggtggtatagtacaactacctgcaaaattcaaggtttaacaattattccatctgcaggctgccattgtgaattctcagacacttgaggaggttgcaaggcttgaaaaggtagcatgtcctttcgtttagctcctgcgctttgtacagtttggaacagctaactatgggctcacatttctttttcactactgtgatgattaggcactgagcactggccaaattcctgctgaatttgcaatccccaagccagatgctaatatggctgatgcttcagaggaaactgaaaagatggagacagatggtcagaaccaagaaaatggggcggatgagaagaagcaaaatgaagaaagcaccccaattgaagaggtaatgataatatttgctgtatagttttgcttttatttcatatgccatcatgatatcaattgcttctccttacaacttttgtattattttcacaggattgaaggcatatgcacacactgatataatctggcaccaagttggtgttagatttccgttttatttgtgggggcaaagccacattgcgatgcctgatctcgttgaatgctctcgctggtctctagcatagtaccggtatttctgtatcttgtgaatgctaacatttttcagaagatggaaaaactatttgctgtgtttaggaaacaagcttggggtattttataccttccagtaccgct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0234800, RefSeq:Os02g0234800