Os02g0236100

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Revision as of 02:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0236100| Description = Similar to SERK1 (Fragment)| Version = NM_001052924.1 GI:115445218 GeneID:4328829| Length = 4643 bp| Definition = O...")
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Gene Name

Os02g0236100

Description

Similar to SERK1 (Fragment)

Version

NM_001052924.1 GI:115445218 GeneID:4328829

Length

4643 bp

Definition

Oryza sativa Japonica Group Os02g0236100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7740096..7744738

Sequence Coding Region

7740387..7740704,7740807..7741198,7741443..7741778,7741871..7742023,7742092..7742165
,7742366..7742425,7742525..7742596,7742684..7742827,7744065..7744136
,7744250..7744382,7744472..7744580

Expression

GEO Profiles:Os02g0236100

Genome Context

<gbrowseImage1> name=NC_008395:7740096..7744738 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:7740096..7744738 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggccccgcgccctcgccgtggcggcggcggtggtggtcgccgcgtgggccgtcgccgccgccggggacccgccgctgtcgcccaaggggctcaactacgaagtggcggcgctgatggcggtgaagagcaggatgcgggacgagaagggggtgatgggagggtgggacatcaactccgtcgacccgtgcacctggtccatggtcgcctgctcccccgacggattcgtcgtctcgctgcagatggcgaacaacggattggccgggacgctgtcgccgagcatcgggaacctcagccacctgcagacaatgttactacagaataacatgatatcaggtggcattcctccagagattgggaagttgaccaatctgaaagctcttgatctttctggtaaccagtttgttggtgaaatcccaagttctctagggcggctgactgaattaaactatctgcgcctagataagaacaacttgtctggacagatccctgaagatgtcgcaaagcttccaggtctcacattccttgatttatcatccaataatttgagcggcccggttccaaaaatctatgcacatgactacagtattgcaggaaacaggttcctttgcaattcatcaattatgcatggttgcaaagatctcacagtattaactaatgaatcaacaatttctagcccgtcgaaaaaaacaaacagccatcatcaactagctctggcaatttcattaagcatcatctgtgccacagtatttgttctgtttgtcatttgttggctaaaatattgcagatggcgcttgccttttgcttctgctgaccaagatcttgaaattgaattgggccatctaaagcacttctcatttcacgagcttcagagtgcaactgacaatttcaactcaaagaacatattaggtcaaggtggctttggtgttgtttataaaggctgtctgagaaatggagctttggtggctgtaaagagactaaaagatcctgatattactggtgaagttcaatttcagacagaagtggagttgattggtctagctgtgcacaggaaccttttgcggttatatggattctgcatgacctcaaaagaaaggttgcttgtatatccatatatgccaaatggcagtgttgctgatcgcttgagagattaccatcatggaaaaccatctcttgattggagcaagcgtatgcggattgctgttggggcagccaggggactgctgtatcttcacgaacaatgcaatcctaaaatcattcacagggatgttaaagcagctaacattttgcttgatgaaagttttgaagcaattgttggggattttggattggcaaaacttcttgaccgacaagaatcacatgttactactgcagttaggggcactattggacatattgctccagagtatttatcaacaggacagtcttcagaaaagaccgatgtttatgggtttggtattctcttgttggaactgatcactgggcctaaaaccttgagcaatgggcacgcgcaatctcagaagggaatgattctagattgggttagagaagtcaaggaagaaaataaactggataaactggttgacagggatctgaaatattcatttgatttcgccgagttggagtgttctgttgacgtaattctgcaatgcactcagaccaatcccattttgcgtcccaagatgtcggaagtccttaatgcccttgaagctaatgtcaccctgccagagaacggcatcgacttgaatagagaagtgcctccctatggaggatcttgcagtttctcagtaaggcatgaggatcctcatgattcatcatccttcataatagagccaattgagctatctggtcccagatga</cdnaseq>

Protein Sequence

<aaseq>MAGPRALAVAAAVVVAAWAVAAAGDPPLSPKGLNYEVAALMAVK SRMRDEKGVMGGWDINSVDPCTWSMVACSPDGFVVSLQMANNGLAGTLSPSIGNLSHL QTMLLQNNMISGGIPPEIGKLTNLKALDLSGNQFVGEIPSSLGRLTELNYLRLDKNNL SGQIPEDVAKLPGLTFLDLSSNNLSGPVPKIYAHDYSIAGNRFLCNSSIMHGCKDLTV LTNESTISSPSKKTNSHHQLALAISLSIICATVFVLFVICWLKYCRWRLPFASADQDL EIELGHLKHFSFHELQSATDNFNSKNILGQGGFGVVYKGCLRNGALVAVKRLKDPDIT GEVQFQTEVELIGLAVHRNLLRLYGFCMTSKERLLVYPYMPNGSVADRLRDYHHGKPS LDWSKRMRIAVGAARGLLYLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLD RQESHVTTAVRGTIGHIAPEYLSTGQSSEKTDVYGFGILLLELITGPKTLSNGHAQSQ KGMILDWVREVKEENKLDKLVDRDLKYSFDFAELECSVDVILQCTQTNPILRPKMSEV LNALEANVTLPENGIDLNREVPPYGGSCSFSVRHEDPHDSSSFIIEPIELSGPR</aaseq>

Gene Sequence

<dnaseqindica>4035..4352#3541..3932#2961..3296#2716..2868#2574..2647#2314..2373#2143..2214#1912..2055#603..674#357..489#159..267#agtattatactcgcgcaggcgcccatggccgccaagcccgagctcctgctgcagcgtagcccacctcaagccaccgcctccgcctccgccgccgctgctgcgctgcgcccgcgcggcctcctcctcgccctccccggcgtcgccgtcggactcctctcatggcggggccccgcgccctcgccgtggcggcggcggtggtggtcgccgcgtgggccgtcgccgccgccggggacccgccgctgtcgcccaaggggctcaactacgaaggtgcgtgggttgggtagcgtgggttttggttggggaacgggaaccctaggtgggttagggttttgatatgatgtggggggtttttgcagtggcggcgctgatggcggtgaagagcaggatgcgggacgagaagggggtgatgggagggtgggacatcaactccgtcgacccgtgcacctggtccatggtcgcctgctcccccgacggattcgtcgtctcgctgtgaggattcccctctcctgattcgttcgtgggattttgttattgctgctgctactgctcgtggtggtggtgttgattatggcggttttggttggattgctgtgctgctgcaggcagatggcgaacaacggattggccgggacgctgtcgccgagcatcgggaacctcagccacctgcagacaatgtaaggggttcttgaacgaattcattcgaaccttatcaaatgcaaaggttttgttcttgttccattaatgcatttattagtgagcacggattgtctcatagtcgtagcactgcaaaattagttgagctgggttggtaggatcagttttccccaactgttgttttggatttggtaccatccgattggtgattgatcgattgatatctccatagttaaagagctggaaagtgagggcattaccctatgggctatgtctcttgtagttgaacttaggagaactccatgtagggtccgtgaacactgaacatttactctccagagccaggccaagacagatgtgtaaaatacatcacttgagagatgacagctgacatagcatggcacctctgaataaaatttcattttcttcatctgaaaagagtgggggacagatgccatgccatggcatctccatttttaatattttttatagaccttcatgtgggcaaatgacacttttcgtacaactgaagcatttccaatgctagcattggaacaccattttcatgtgagcaagtcacacttcctattagttataataaatgacattctcaggattcaaggcctggtaataatgaatgtgcggctcaccttgtttggtctaagtatcattgaaatagatccatataaagagttgagataatcatgactcactaattagtgcattttctgttctataaacatttttctgaaccttgcagcactagaattcataaccaaagtttgtctacagacccaaacgtgaaaattatatgcagattctatagcaattattatttttagtatataaatagtctggaagtatattgtcaccttaactgactgctttagtagaaatgtatcttaatctgtagagagattcatgtttcttttggctaaccctacaaatcagaatgatcaactgtgctgcatatgtggattgaaggctattactatgtgaccactatagaatattcatttgattcatatttgaatataacattgaaatgtttatgagtatggtttgtccaacatttgattgtcttcatcctatttgtaaggacatgagcatattacatcttgcagtgtcatatacttaagttgatcgtgtattcatactgattcccatgaacttgtttgcttgacatctgtctgtcctcataaaatgaaacaaaataccattacttgattactcaacatttttattgtcttcattcaggttactacagaataacatgatatcaggtggcattcctccagagattgggaagttgaccaatctgaaagctcttgatctttctggtaaccagtttgttggtgaaatcccaagttctctagggcggctgactgaattaaactatctgtgagcagatgccaaaatattgcttcaaattttgtgccacatattttgcttgtcccaaaatatgacttctgtttgtgaatccttcaggcgcctagataagaacaacttgtctggacagatccctgaagatgtcgcaaagcttccaggtctcacattcctgtatgtctcttttcaccactttatattctctcttctgttataaatgttgtgtataaacgtaattattgatttttacccaacatgggaaaattgtttcagtgatttatcatccaataatttgagcggcccggttccaaaaatctatgcacatgactacaggtaagttggtgagagtgcgtacgataagctctgcttatttccttccatttgcttaaccaaagtgtttggcacctgcatattttctgtgttcttatgctaaactaagcgtaggcacataattccttcccaaagcatatgcacataattccttctcatcagttttaataccctcctgatgatcactttcctctgatttccagtattgcaggaaacaggttcctttgcaattcatcaattatgcatggttgcaaagatctcacagtattaactaatggtaattgtttacctgatgtcatatacttgcatatttatctgttggacctaatttgccttcctttgcagaatcaacaatttctagcccgtcgaaaaaaacaaacagccatcatcaactagctctggcaatttcattaagcatcatctgtgccacagtatttgttctgtttgtcatttgttggctaaaatattgcagatggcgcttgccttttgcttctgctggtaattttcaaagggttaagcatctactctcttattgcagagttcagaatatatagcatctgataaacattcttttcttttgttacttctagaccaagatcttgaaattgaattgggccatctaaagcacttctcatttcacgagcttcagagtgcaactgacaatttcaactcaaagaacatattaggtcaaggtggctttggtgttgtttataaaggctgtctgagaaatggagctttggtggctgtaaagagactaaaagatcctgatattactggtgaagttcaatttcagacagaagtggagttgattggtctagctgtgcacaggaaccttttgcggttatatggattctgcatgacctcaaaagaaaggttgcttgtatatccatatatgccaaatggcagtgttgctgatcgcttgagaggtaattacaatcgtccaaaacaaattttgattttatgttttaatatagctgggccagtttccagttgtagttcttattgaaggtagactgttgttgatccaaaagctaaaatgatgattatgtaaaactatgatagcttccttacaaagatgtgtgttgtgatcctgtgttggttgattttgcatcattctcctatcatttcttttccatttcactctcttactaacacaaagttaatttgtagattaccatcatggaaaaccatctcttgattggagcaagcgtatgcggattgctgttggggcagccaggggactgctgtatcttcacgaacaatgcaatcctaaaatcattcacagggatgttaaagcagctaacattttgcttgatgaaagttttgaagcaattgttggggattttggattggcaaaacttcttgaccgacaagaatcacatgttactactgcagttaggggcactattggacatattgctccagagtatttatcaacaggacagtcttcagaaaagaccgatgtttatgggtttggtattctcttgttggaactgatcactgggcctaaaaccttgagcaatgggcacgcgcaatctcagaagggaatgattctagattgggtatctccttttagttcaatctttatctaattacctaactactgtcatttgatgcccatatccttgtatactttcttaccacctaatcttaattctctgcaggttagagaagtcaaggaagaaaataaactggataaactggttgacagggatctgaaatattcatttgatttcgccgagttggagtgttctgttgacgtaattctgcaatgcactcagaccaatcccattttgcgtcccaagatgtcggaagtccttaatgcccttgaagctaatgtcaccctgccagagaacggcatcgacttgaatagagaagtgcctccctatggaggatcttgcagtttctcagtaaggcatgaggatcctcatgattcatcatccttcataatagagccaattgagctatctggtcccagatgatcacaattgtacatcaggggggagaaccacaaacaaaaggatgacaattgtacaaaaacgtgtatagtctggatgtagttttacttggaatctgcaaggagtttgctggtgttgcaaatgcctcacgatccaatctctaactgctaggtagatcggtcatttctggtcgtgttggcgtatgcactgtacagtgcaaatcagtatgctacccatcctacaatatgttctcgagaaaattacattgcatcttgcatgtttttctcagttacaagaatcagtatgaaagagccc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0236100, RefSeq:Os02g0236100