Os02g0240300

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Revision as of 02:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0240300| Description = Similar to Class III peroxidase GvPx2b (Fragment)| Version = NM_001052936.1 GI:115445242 GeneID:4328842| Length = 14...")
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Gene Name

Os02g0240300

Description

Similar to Class III peroxidase GvPx2b (Fragment)

Version

NM_001052936.1 GI:115445242 GeneID:4328842

Length

1455 bp

Definition

Oryza sativa Japonica Group Os02g0240300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:7977542..7978996

Sequence Coding Region

7977707..7977916,7978052..7978249,7978333..7978890

Expression

GEO Profiles:Os02g0240300

Genome Context

<gbrowseImage1> name=NC_008395:7977542..7978996 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:7977542..7978996 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttccaggacttggcattgctggttgttgctcgtcttcttcctcctctccgacgacgcctccgggcagctgtcgacgtcgtactacgcagatagctgcccgtcggtggagaaggtcgtgcacgccaccgtggcgagcgccatccaggccgagcgccggatgggcgcctccctcatccgcctcttcttccacgactgcttcgtccagggctgcgacgcgtccatccttctggacgacgtgccggcgaccgggttcgtcggcgagaagaccgccgccccgaacaacaactccgtgcgcgggtacgaggtcatcgaccagatcaaggccaacgtcgaggacgtctgccccggcgttgtctcctgcgccgacatcgtcgccctcgccgcgcgcgacagcaccgccctgctcggcgggccgagctgggcggtgccgctcggccggtgcgactcgacgacggcgagccgcagcgaagcgaacagcgacctgccggggccggggagcaacctcaccatgctcatcgcgcggttcggcaacaagggcctaagcccgcgcgacatgacggcgctgtcgggctcgcacaccgtcggcttctcgcagtgcaccaacttccgcgcccacatctacaacgacgccaacatcgacccgtcgttcgccgcgctgcgccgccgcgcgtgccccgccgcggcacccaacggcgacaccaacctggcgccgctcgacgtgcagacgcagaacgcgttcgacaacgcctactacggcaacctgctggtccggcgaggcctgctccactccgaccaggtgctgttcaacggcgggtcgcaggacgcgctggtgaggcagtacgccgccaacccggcgctgttcgccgccgacttcgccaaggcgatggtgaagatggggaacatcgggcagcccagcgacggcgaggtcaggtgcgactgcagggtcgtcaacgacagctga</cdnaseq>

Protein Sequence

<aaseq>MASRTWHCWLLLVFFLLSDDASGQLSTSYYADSCPSVEKVVHAT VASAIQAERRMGASLIRLFFHDCFVQGCDASILLDDVPATGFVGEKTAAPNNNSVRGY EVIDQIKANVEDVCPGVVSCADIVALAARDSTALLGGPSWAVPLGRCDSTTASRSEAN SDLPGPGSNLTMLIARFGNKGLSPRDMTALSGSHTVGFSQCTNFRAHIYNDANIDPSF AALRRRACPAAAPNGDTNLAPLDVQTQNAFDNAYYGNLLVRRGLLHSDQVLFNGGSQD ALVRQYAANPALFAADFAKAMVKMGNIGQPSDGEVRCDCRVVNDS</aaseq>

Gene Sequence

<dnaseqindica>166..375#511..708#792..1349#gtgccaatcacaagagcaagaagctactgatcttagctgagctagagttccagtgatcattaaggaaagaattagcacttggtcaatcacacataggtaattaagattaattgcgatcgagatcatatcactagctagctagctgtgtgtacggagtacggtgccatggcttccaggacttggcattgctggttgttgctcgtcttcttcctcctctccgacgacgcctccgggcagctgtcgacgtcgtactacgcagatagctgcccgtcggtggagaaggtcgtgcacgccaccgtggcgagcgccatccaggccgagcgccggatgggcgcctccctcatccgcctcttcttccacgactgcttcgtccaggtttaatcatcttgtaaactggattaatttgttaatcaccacgttataatgtcttagggttctaacgtttgcaactttgcaaggatgattattgattaatcatggtattaatgatcgatctgcaaactggtccagggctgcgacgcgtccatccttctggacgacgtgccggcgaccgggttcgtcggcgagaagaccgccgccccgaacaacaactccgtgcgcgggtacgaggtcatcgaccagatcaaggccaacgtcgaggacgtctgccccggcgttgtctcctgcgccgacatcgtcgccctcgccgcgcgcgacagcaccgccctggtacgttcacccgagtgttcgacgcgtgctcgtgacatgcgtggcgagctggtgtgtgagcgacattcgtcttgtccatgcagctcggcgggccgagctgggcggtgccgctcggccggtgcgactcgacgacggcgagccgcagcgaagcgaacagcgacctgccggggccggggagcaacctcaccatgctcatcgcgcggttcggcaacaagggcctaagcccgcgcgacatgacggcgctgtcgggctcgcacaccgtcggcttctcgcagtgcaccaacttccgcgcccacatctacaacgacgccaacatcgacccgtcgttcgccgcgctgcgccgccgcgcgtgccccgccgcggcacccaacggcgacaccaacctggcgccgctcgacgtgcagacgcagaacgcgttcgacaacgcctactacggcaacctgctggtccggcgaggcctgctccactccgaccaggtgctgttcaacggcgggtcgcaggacgcgctggtgaggcagtacgccgccaacccggcgctgttcgccgccgacttcgccaaggcgatggtgaagatggggaacatcgggcagcccagcgacggcgaggtcaggtgcgactgcagggtcgtcaacgacagctgatcatccatgggctgtatatattttcatgtggatttgtggtgacgtatctttgttgtaaatactgtgatgcaataaagcagcgtggtaacatcgttgctattttctc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0240300, RefSeq:Os02g0240300