Os10g0402100

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Revision as of 08:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0402100| Description = No apical meristem (NAM) protein domain containing protein| Version = NM_001189213.1 GI:297727556 GeneID:9269880| Le...")
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Gene Name

Os10g0402100

Description

No apical meristem (NAM) protein domain containing protein

Version

NM_001189213.1 GI:297727556 GeneID:9269880

Length

3674 bp

Definition

Oryza sativa Japonica Group Os10g0402100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13954705..13958378

Sequence Coding Region

13954705..13954727,13954841..13955118,13955398..13955697,13956430..13957335,13958278..13958378

Expression

GEO Profiles:Os10g0402100

Genome Context

<gbrowseImage1> name=NC_008403:13954705..13958378 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13954705..13958378 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgatggcggcgagttcattcctcgtcacaccacgcgcgagcagccggcggatggggacggcggcggcagcggtggaagcaacaacaacaatgggaagttgaaggggaaggagaaggtggtgccggagtacggcaagaaccggcacggcatgcctgtcggtttctacttcgtccccatggacctagagcttttcgccatcctcatgtgcaagctcgtccgaggtgaggtccccggcgccctcaataacgtctttgagcatatcaggatacttgaattccaccccgccctcctccgtgagacgtatatcgagaacatggaggacagatgcatctacttctttagcaggaggctattcgcagcgaaggctaggaacaagaggcagccgatgagggtggcaaacggtgggacgtggaaggcatctggtgggagcaagacggtgaggagcaagaaggttggcggcatcgatgttggtcagaagctcaccatggtgttctacgagcgtaggttcgagggcgaccaaaaccctgtcaagaccaactgggccatgcacgagtacaccaagatcattcctagctccaaaaaccaggtagtacttgatcagaaggaaggaggacacagagccggtgaacgctgccgccgcggcgtcgagcacggacaagccctccacgccggaggcactgccaccgcctacgccaccgccacggccattgctgaacatggccggatcatcgtcggcaacgtcgctactgccaccgcaattgccaggcctggctgggtcgtcgtcgacgatgccgctggcactgccactgcagctgcctggcctgcccgggtcgtcggcggcgatgtcgctctgccgggcttggctggagagatgacgtccatggcggaccaggcgaacatggcctcgacgtcacaggcgtcagcaccgtcgtcggagctcccgcaggactggtacgacgagtacgaggtcgcgtacggtgccgcggcgccgccgtctcctagcacgatcagctgcgcggcgctgccgagctcgccgacggcgtggtggccgtcatcgatcggcgggccggtgcagcacgacggctacctcgggatggcggatcctgcgtcgtgtaatacgttggaacacctgttgcccagcgcggcgatcccaccagagccaatggcgccgccgaagaactcgccggcggcgccaccaccggccgacgccggcggcaactacgaccacccggagctcgccgactacggcggcggcgtccaggcgcagcacgagcatcatcagccgcaggagctgacggatggcgcggacggcgacgcacagctagagctaggcgccgcggagtttgattccgaacgagtagccgaaatgatatcccaaataatggatggtgaattcgtgtttaaatttgaggacgacaccattgttagcttcaacgaggtggcggcggcgccgatgttgatcgacggcggtggggacggcgacggcgatggtgcagatggagttggtaaactagcgttgaaggtctcaaaggccgaatgcgattctctgcacaagatctggccttctcttgctcggcatccgaagaagtccggtgatctgtag</cdnaseq>

Protein Sequence

<aaseq>MPDGGEFIPRHTTREQPADGDGGGSGGSNNNNGKLKGKEKVVPE YGKNRHGMPVGFYFVPMDLELFAILMCKLVRGEVPGALNNVFEHIRILEFHPALLRET YIENMEDRCIYFFSRRLFAAKARNKRQPMRVANGGTWKASGGSKTVRSKKVGGIDVGQ KLTMVFYERRFEGDQNPVKTNWAMHEYTKIIPSSKNQVVLDQKEGGHRAGERCRRGVE HGQALHAGGTATAYATATAIAEHGRIIVGNVATATAIARPGWVVVDDAAGTATAAAWP ARVVGGDVALPGLAGEMTSMADQANMASTSQASAPSSELPQDWYDEYEVAYGAAAPPS PSTISCAALPSSPTAWWPSSIGGPVQHDGYLGMADPASCNTLEHLLPSAAIPPEPMAP PKNSPAAPPPADAGGNYDHPELADYGGGVQAQHEHHQPQELTDGADGDAQLELGAAEF DSERVAEMISQIMDGEFVFKFEDDTIVSFNEVAAAPMLIDGGGDGDGDGADGVGKLAL KVSKAECDSLHKIWPSLARHPKKSGDL</aaseq>

Gene Sequence

<dnaseqindica>1..23#137..414#694..993#1726..2631#3574..3674#atgcccgatggcggcgagttcatgtattggattaaaaaaaaatcaaaaacgttcccctaaattgaattcgaatcaaatgaccgcctcactcccacaaaaagaagagaacatctcgcgccacccctcaaatacgcagtcctcgtcacaccacgcgcgagcagccggcggatggggacggcggcggcagcggtggaagcaacaacaacaatgggaagttgaaggggaaggagaaggtggtgccggagtacggcaagaaccggcacggcatgcctgtcggtttctacttcgtccccatggacctagagcttttcgccatcctcatgtgcaagctcgtccgaggtgaggtccccggcgccctcaataacgtctttgagcatatcaggatacttgaattccaccccgccctcctccgtggtacgcccgcttcgccgccaccgtcactctacccctctcttgttgtttccttcgtcattagtattttaaatagtgggataagacatttagcggttgggtttctcaaacagcaatacctatagtgggttaaatggagttattacagttaaattatacataaaagcaaatagttggacccttcttttaacatttataaccgaagaatagcagcagctataactgaggatttaaaaccatgttcatcattgtcttcttcttctccggcgatggcgtgtgcagagacgtatatcgagaacatggaggacagatgcatctacttctttagcaggaggctattcgcagcgaaggctaggaacaagaggcagccgatgagggtggcaaacggtgggacgtggaaggcatctggtgggagcaagacggtgaggagcaagaaggttggcggcatcgatgttggtcagaagctcaccatggtgttctacgagcgtaggttcgagggcgaccaaaaccctgtcaagaccaactgggccatgcacgagtacaccaagatcattcctagctccaaaaaccaggtagtacttggtaatttatatttaaattcaaatcagtccgcaaatacattacattacgatctatatctaaatagggtgtagctatatttatggcgtcatactttttataaaaaaatagtcggcatgtatttatattgtaagttcataaattacatatgtaattttagtgtatttacaatgtaagtctcaaaattacatatgtaagtactaaaattacatatgtaaattcgaaaattacatactaattgcatatgtaagtggggtgtaaatgaggtgtaactactgtgtaagtggctgaaaaaaatcgactatatttctagcaactccgtctaaatattgtgttttgtcttgtaattaacattccattatacggcctccattacatattataagtcgatttgactttttcatagttaaacttcaagtttatagacaaatataataacatctaaaacatcaaactagtttcattaaatctaacattaaatatattttgataatatatatatttttgaaatactaccatattttttctataaatttatttagtcaaacattaaactgaaaaaagtttaaattagaaaaaaattaaaatgacttataatataaaacgtataaaatggagggagtattcatgatcaagcggattgatcgaattcaatttgtgctaatttggcttgataaattaattttgtggattttggacaagcttgaggaccttgccgtgtaccgcctgtacaagatcagaaggaaggaggacacagagccggtgaacgctgccgccgcggcgtcgagcacggacaagccctccacgccggaggcactgccaccgcctacgccaccgccacggccattgctgaacatggccggatcatcgtcggcaacgtcgctactgccaccgcaattgccaggcctggctgggtcgtcgtcgacgatgccgctggcactgccactgcagctgcctggcctgcccgggtcgtcggcggcgatgtcgctctgccgggcttggctggagagatgacgtccatggcggaccaggcgaacatggcctcgacgtcacaggcgtcagcaccgtcgtcggagctcccgcaggactggtacgacgagtacgaggtcgcgtacggtgccgcggcgccgccgtctcctagcacgatcagctgcgcggcgctgccgagctcgccgacggcgtggtggccgtcatcgatcggcgggccggtgcagcacgacggctacctcgggatggcggatcctgcgtcgtgtaatacgttggaacacctgttgcccagcgcggcgatcccaccagagccaatggcgccgccgaagaactcgccggcggcgccaccaccggccgacgccggcggcaactacgaccacccggagctcgccgactacggcggcggcgtccaggcgcagcacgagcatcatcagccgcaggagctgacggatggcgcggacggcgacgcacagctagagctaggcgccgcggagtttgattccgaacgagtagccgaaatgatatcccaaataatggatggtgaattcgtgtttaaatttgaggacgacaccattgttagcttcaacgaggtggcggcggcgccgatgttgatcgacggcggtggggacggcgacggcgatggtgcagatggaggtgtcggagatgatccattcgataattaggccactgtgttcgaaaaccgttggaattttcagttttcctaactatagaattatgtcttcaaatttactccttttttgtaagtcaatgttcatatttatttttttagataatgttcatatttattatggctgcatgtttttagttctgttcagaccattggtaattgtactttactatgcatgcgtaactaatcgagatctactgttcattctgaattgctcgagcatatgattgcattttggacaagatgaattgcctctccgcgtcagtcgagttagaagtacgaataatccatttatgggacatagacaaaggggttcatagtctatgctaacggtagtttttcgatctgtggatggttgctaattgttgtaagtagtgatgattggcaattgctccactgaaatgaagctttgcagctttcatgctgttgctgacttgctgttattgatgccatgcaagttagttaaccatttgtctaaacttttgaaacgctgattactaccagtatatcgagatcaattttacgaaaattgaagggcactcgtatggattgttagtgcgtcagaattcacatactcgaattacaaaaattacaagcttgatgagttaggctgcatcagatgtacagagaacaaagccgagaactaatgctactgactgcaagaataaaagacaatatccagtatgcagtgcaaacaagcagtcataaattccaaatgggcaacggtagctgcttcattttgtcaaccgaatatcaagtttccagccgtcgttggggtttctgaataatccatatttcctccatttgcacgataacatcatataaactcacatgccatcatcattcatcagcaaccgccatgtgcaaaagctgtgagcatcacaagtctgaaaaacactggtttgcagttggtaaactagcgttgaaggtctcaaaggccgaatgcgattctctgcacaagatctggccttctcttgctcggcatccgaagaagtccggtgatctgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0402100, RefSeq:Os10g0402100