Os10g0402200

From RiceWiki
Revision as of 08:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0402200| Description = Origin recognition complex subunit 3, N-terminal domain containing protein| Version = NM_001071085.1 GI:115481913 Gen...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os10g0402200

Description

Origin recognition complex subunit 3, N-terminal domain containing protein

Version

NM_001071085.1 GI:115481913 GeneID:4348571

Length

5532 bp

Definition

Oryza sativa Japonica Group Os10g0402200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:13958301..13963832

Sequence Coding Region

13958301..13958406,13958535..13958702,13958940..13959067,13959180..13959255,13959431..13959508
,13959690..13959769,13960116..13960185,13960435..13960592,13960930..13961020
,13961084..13961160,13961317..13961391,13961503..13961776,13962616..13962746
,13962859..13963028,13963118..13963292,13963428..13963676,13963782..13963832

Expression

GEO Profiles:Os10g0402200

Genome Context

<gbrowseImage1> name=NC_008403:13958301..13963832 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:13958301..13963832 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctgcgccgcccggtgaggctccgctcaccgccgccaccaacatcgagccgttctatgtcctccacaagggcggcgccgctgcctcgtcgtcctcctcgtcggctccctcgctgccgtcgtccggccgggcgcgccgccggatcgacgtttccgggctggcatctcccaaccccaaacccgggaagagatcccgcgacgacgacgccgctgaggacgacgacgacgacgagctgtacgagcggctccgcctcgacgccttccaccgcgtttggtccaagatccagtccaccatcaatgaggttcttcgggggatcagcctcaagctgttcgaccaggtgctgcgatgggtgcaggaatccttctccgcagtccgctccattgcgagaccttccgcagccgaggtgcggcagccataccctctcctcaccgatgtgatctgcaggaagataccgacggcttttgttctcaccaagaatgcggagttcgttgacgacatcacgacattccgggatcttgcagagtatcttgagtccaatggatgtcacctggccaagctgtcggcgactgaattatcggaaaaaaatggagttggttgttgcttcaggagcttgttgaggcagctactttcagatgttccagatgtagcggatatatttgcacttgcatcttggtactctgcagctgagaactatgatcagcctatagtcgtcgtaattgatgatttagagcaatgctctggtgatgtcctgggagagcttgtgatgatgctaagcgagtgggtgattaaaattcccatcttctttgtgatggggattgcaaccacccttgacgcaccaaggaaactactctcatcagaagatcttcaaagattagagccgtgcaagctgaccttggggtctccttctgatagaatgaacgcacttgttgaggctatccttgtcaaaccatgtgctggattctgtatcagtcatgaagttgcagttttccttagaaattactttttcaagcatgatgggaccataacatcttttattagtgctctcaagcttgcttgtagtaagcacttctctgtcgaacctctgagcttcttgtgcatgggaatgcttgaagaggatcgtgagaacttctggcatgataagtttaatgcactaccccaagaattgcggaaatatgcatctggtctcccgtcatgcacaagggaaaaggactcaaccaagtctggcgacaatatggttgacgggttgtctgagcttatgaatattcaaaaagattggagttcagttctcttgtgcttgtatgaagctggaaaacatggtaaagtgcaacttttggatattttctgtgaggctgtaaaccctgacctgcacactcagaaggcacccaatctaccaaatgagaagtcaggaactagtagaagatttatagatcaggtgatggatacaataaggtaccttccagtggaaacactattttgtcttctagaagtttggagcatccatctaaacgggatggataagataacaaacaaggtgaaagagcttcagtccaccacaatcagtacagacagtgtgaggatcacaaaggataagtggcctaggagatcaacaaatagtactggaaatagtacagtagcactgaatgataaagtggctatgctgttggatgatgttaccaggaaatttctggtctctgttgagtgtttaccttttcatgaaatcgtctgtttcaagaatgttagcattcttcaatctgctttaattggaaatccgagaagaatggtccagcttgatctagtcaagtcacacaaacatcttaaatgctcttgctgcaggaagaatggaattgctgtgttggcatccatgcatgatacatcaattatgtgcaatctagcccaagaatatggtgatgtaatcaaccttcatgactggtacatatctttcgatggcattatcaatagcgtgcattcaaaaatcaaaaggaaaccgcacacatctccctcgaaaaagaaatcaaaacccgttgctgcggagagtgaagccatgatccaagcaaggttttgcagagctgtcaccgagctacagatcaccggacttcttcggatgccgagcaagagaaggccagatcttgtgcagagaatcgcattcggcctttga</cdnaseq>

Protein Sequence

<aaseq>MAAPPGEAPLTAATNIEPFYVLHKGGAAASSSSSSAPSLPSSGR ARRRIDVSGLASPNPKPGKRSRDDDAAEDDDDDELYERLRLDAFHRVWSKIQSTINEV LRGISLKLFDQVLRWVQESFSAVRSIARPSAAEVRQPYPLLTDVICRKIPTAFVLTKN AEFVDDITTFRDLAEYLESNGCHLAKLSATELSEKNGVGCCFRSLLRQLLSDVPDVAD IFALASWYSAAENYDQPIVVVIDDLEQCSGDVLGELVMMLSEWVIKIPIFFVMGIATT LDAPRKLLSSEDLQRLEPCKLTLGSPSDRMNALVEAILVKPCAGFCISHEVAVFLRNY FFKHDGTITSFISALKLACSKHFSVEPLSFLCMGMLEEDRENFWHDKFNALPQELRKY ASGLPSCTREKDSTKSGDNMVDGLSELMNIQKDWSSVLLCLYEAGKHGKVQLLDIFCE AVNPDLHTQKAPNLPNEKSGTSRRFIDQVMDTIRYLPVETLFCLLEVWSIHLNGMDKI TNKVKELQSTTISTDSVRITKDKWPRRSTNSTGNSTVALNDKVAMLLDDVTRKFLVSV ECLPFHEIVCFKNVSILQSALIGNPRRMVQLDLVKSHKHLKCSCCRKNGIAVLASMHD TSIMCNLAQEYGDVINLHDWYISFDGIINSVHSKIKRKPHTSPSKKKSKPVAAESEAM IQARFCRAVTELQITGLLRMPSKRRPDLVQRIAFGL</aaseq>

Gene Sequence

<dnaseqindica>5427..5532#5131..5298#4766..4893#4578..4653#4325..4402#4064..4143#3648..3717#3241..3398#2813..2903#2673..2749#2442..2516#2057..2330#1087..1217#805..974#541..715#157..405#1..51#atggctgcgccgcccggtgaggctccgctcaccgccgccaccaacatcgaggtgcgtttccatctctctctctctctctctcaggcggttgctgcccctctcgccggccggcgggcgccgctgctgctctgggattaacttccgttctccttgcagccgttctatgtcctccacaagggcggcgccgctgcctcgtcgtcctcctcgtcggctccctcgctgccgtcgtccggccgggcgcgccgccggatcgacgtttccgggctggcatctcccaaccccaaacccgggaagagatcccgcgacgacgacgccgctgaggacgacgacgacgacgagctgtacgagcggctccgcctcgacgccttccaccgcgtttggtccaagatccagtccaccatcaatgtgcaaactcaattcccccatattccatcgattcgtttactactcactcgcttaattcctcagcaattgcagaatctgacgagtgcgatttctcatcttgggattgatccaattttcgattgctcgtgtgggcaggaggttcttcgggggatcagcctcaagctgttcgaccaggtgctgcgatgggtgcaggaatccttctccgcagtccgctccattgcgagaccttccgcagccgaggtgcggcagccataccctctcctcaccgatgtgatctgcaggaagataccgacggcttttgttctcaccagtgagaatccgccatcaatttgttcagctggttggtaggtgtggcgaagaattgctcggtttgatggtttgggcttcttaattttgcagagaatgcggagttcgttgacgacatcacgacattccgggatcttgcagagtatcttgagtccaatggatgtcacctggccaagctgtcggcgactgaattatcggaaaaaaatggagttggttgttgcttcaggagcttgttgaggcagctactttcagatgttccagatgtgagtgacatggcctgctctcaagtcttttttagctgtactttacttgagagtttgagactggagtgcatagccttacttgttgtctgttctggttttgtcactcgaataggtagcggatatatttgcacttgcatcttggtactctgcagctgagaactatgatcagcctatagtcgtcgtaattgatgatttagagcaatgctctggtgatgtcctgggagagcttgtgatgatgctaaggtaaaatttatgtttcatagcattcaatgggtttaaacaactgcggttacatcaaacatgaagtacataaaagttgttttgaccacggttctataccttaatatggttgcttaacatatagcccctccgttctgaaatatttcttgttgtttagttcattttttaactagccaacgtcatacaaaaagaaacacagggagtatttgtttttatcttctctctctctctctagaaagagaggaaggatcctctcccatttctattatcagaagcaaaacagtgaccacaccatccagattacaagattaaggctaaaacagaccccaccttttagccctggatagcgtgatcccactattttcagctaaaaagtttcaagatgctaaaattttgaacgcaatcatgaagctaaactagagagcaactgctacattttcagattacagttcctaaatcacacataacaactcggtttcataaaccctccccggtttttgagccaaaacagcagcattttactttcataagcatccatgtcttctgtcttgccatcatgacacttccccttctatcccccttctagtcttctacttcagccttcttgtcatgcttcattataactgagatagcataaaagcataccaatttgttgtatgatatttttttctctgttttggtgtggaactcaccaatcccttgtttaatcctcttttagaagatattcttcttacaattaagaaaatgaacctggttttatctttcatttatatccttagtttcacctaataaaatttatagtcttgggtatgattttaacctgaatattctatctgttgcagcgagtgggtgattaaaattcccatcttctttgtgatggggattgcaaccacccttgacgcaccaaggaaactactctcatcagaagatcttcaaagattagagccgtgcaagctgaccttggggtctccttctgatagaatgaacgcacttgttgaggctatccttgtcaaaccatgtgctggattctgtatcagtcatgaagttgcagttttccttagaaattactttttcaagcatgatgggaccataacatcttttattagtgctctcaaggttggttcttcatgttaatcttaatctcttttcactgatgttaacaagttgttatttatgtttttccccttatttttgatggatgctagtactaaatcaaattttatgcagcttgcttgtagtaagcacttctctgtcgaacctctgagcttcttgtgcatgggaatgcttgaagaggatcgtgaggtctgttttattttcttccaaacataattcaatgttagctaattatgttcttctatcactaactggaaaataaatatttttaagtttccatatctttcggtacaaactaatatcttgtattgacatggatttatttctttctgtcttatcccacagaacttctggcatgataagtttaatgcactaccccaagaattgcggaaatatgcatctggtctcccgtcatgcacaaggtacaatactgactttaaagattttcaccagtaatatactttgtctaaaaatttccattgcagggaaaaggactcaaccaagtctggcgacaatatggttgacgggttgtctgagcttatgaatattcaaaaagattggagttcagttctcttggtaagttttctttgttctccagaactttcttatgtttctagaaaacagagttgcccagctattttttttctttaagactcagattttcaagttcatttgtctattgaccttgtgatgtctaaataaaagctaacgaaatgtggtttactcgtgatctaaacttgatgggtaccaacaaatgtgttaccatttgcaattagagacagtggaattctggattatcacttcctttgtacttatgaatacttggataatatcatgcaaagggcctttttttctgcttaagttatagagccataccatcgaataatgtatttcgtatgttgtgattatgcagtgcttgtatgaagctggaaaacatggtaaagtgcaacttttggatattttctgtgaggctgtaaaccctgacctgcacactcagaaggcacccaatctaccaaatgagaagtcaggaactagtagaagatttatagatcaggtgatggatacaataaggtatgttgatgggagttggtttcaggtttttggatgcgaagcttctgattcattgctctagattatctagcggcatttagtagggtattgttgattaatatccattgtagcttataattactatgggagcaaaggggaatttgggattgtaaaattttgggggcagcgacataatagtaccgactgatggaggtggaccctttactgtaatgcttagctcctcttgatgagtgtgttttattggatcaggtaccttccagtggaaacactattttgtcttctagaagtttggagcatccatctaaacgggatggataaggtatgcttattgctaatttttgtagaaaactttttggatatgctatgaactgccataccatatgggttcaagtttcagatggccactttacttggttgctgtctgcaatctttattcaaaacattctgaagggagataattgcttttggtcatttgatgttcgaagtaataccttttgtgtcgagatggcttgagcatttgtcacagtttttgttttgaccaagtcagataactcattcctagtttttaccagttgaaggcttctggcatagagcctagtgtactaaatgtactttttaaaactgtggtgtgactctagttgagaatgtgttcattctaatcccagataacaaacaaggtgaaagagcttcagtccaccacaatcagtacagacagtgtgaggatcacaaaggataagtggcctaggtacttcctgctttattccatatttcatttaaaaattttattagccaaacaaatattaagaatgccaaaacaagttgcaatagcataatgaggttgagtatctctagtggacgaatctgtactgcatttttcagtttcgattatctgaaactggctgaaaatcattttcatggcatatcaggagatcaacaaatagtactggaaatagtacagtagcactgaatgataaagtggctatgctgttggatgatgttaccaggtaaatgttattataagattgaatcaactaagtactattttaatcttatataacttactagatctatttattcagatgattagtacaattgaactgggattatctttctctattttgtttgcttttcaataacttaaagttctttcagcatctaatgcctagatatttcaaacaggaaatttctggtctctgttgagtgtttaccttttcatgaaatcgtctgtttcaagaatgttagcattcttcaatctgtaagtttttcctttacagaaagaaagccggtaccattatgtactacttacttacataataatctataactatcaaattaactgttttaaattctatcacatctcattgtaggctttaattggaaatccgagaagaatggtccagcttgatctagtcaagtcacacaaacatcttaaatgctcttgctgcaggaagaatggaattgctgtgttggcatccatgcatgatacatcaattatgtaagtcctggaaagtattcttattgagcggcgcatctggtggaaatagccatatggtgaaaacttaatcaattggcatactaagttctaatgtttggaatctaaagctcaaaataacagacgtcattctgttgacatagcatgccatgttaaccatcctttatcctgatgtgatcattaaacccattttttaatgtatttttatgctgacacgtattatcctttttaatcttgcaggtgcaatctagcccaagaatatggtgatgtaatcaaccttcatgactggtacatatctttcgatggcattatcaatagcgtgcattcaaaaatcaaaaggaaaccgcacacatctccctcgaaaaagaaatcaaaacccgttgctgcggagagtgaagccatgatccagtatccttgaactaacctttttattacaatttaatatactaaacgtccacaaatatatttgtacagatactagggcagcatttcttgtaatcattaaatccaggtaatccttgactcattggttccagagcaaggttttgcagagctgtcaccgagctacagatcaccggacttcttcggatgccgagcaagagaaggccagatcttgtgcagagaatcgcattcggcctttga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0402200, RefSeq:Os10g0402200