Os02g0245000

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Revision as of 02:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0245000| Description = SWAP/Surp domain containing protein| Version = NM_001052953.1 GI:115445276 GeneID:4328860| Length = 2710 bp| Defini...")
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Gene Name

Os02g0245000

Description

SWAP/Surp domain containing protein

Version

NM_001052953.1 GI:115445276 GeneID:4328860

Length

2710 bp

Definition

Oryza sativa Japonica Group Os02g0245000, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8226016..8228725

Sequence Coding Region

8226040..8228148,8228281..8228550

Expression

GEO Profiles:Os02g0245000

Genome Context

<gbrowseImage1> name=NC_008395:8226016..8228725 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:8226016..8228725 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggccgccatcctgccgctcccggcgccggacggcgacggcgactcccatccgcaacagccgcctccccctcctcccggcggaggcgcgaagcccgagccgccgccgacggtggccacccacacccgccccctcgggatcatccacccgccccccgacatccgcgtcatcatcgagaagacggccaccttcgtctccaagaacggcccggagttcgagcgccgcatcatctcccacaacgccggcaacgccaagttcaacttcctccagccctccgacccctaccacgcctactaccagcaccgcgtctccgagctcgctgccgctcccccctccgccgccgcctccgccgccgacgcggcccccgagcccgacgaatccggcgccgcgccgccgccggccgactccgctgccgcgcccaccgtcgatggcgaggcggcgaaggcggaccactccgccccattccgcgtgccgccgcccaccaaggtgctggtgccacccaaggcggagctctacacggtgcatctgcccgaggggatcaccggggaggagctggacatcatcaagctgaccgcgcagttcgtggcgcgcaacgggaagagcttcctgacgagcctggcgcagcgcgagagcaccaacccgcagttccacttcatccgccccacgcacagcatgttcaccttcttcacgaagctcaccgacacctattcgagggtgctgaacccggtcgaaggcatgcctgccctactgaaggacctacaagacggggcgaaggacctgaccaccgtgttggagcggtgcctgaaccgcctggagtgggaccggtcgcaggagcaagcgaggcagcaggctgaggatgaaatcgaacaggagaggatgcagatgcagatgatcgattggcatgattttgttgttgtcgagacgatcgagtttgcagatgatgagtgcgagggactccctgtgccacttacgctggaggagttgaagcgtcggaagaggattgaggacctgggagaggaggaggcagccatggaattggccgagccagcgaaggatgttgagatggagatggacgaggaggagattcaacttgttgaggaaggaatgcgtgcagcaaggctcgaggaaaatgaaggaggagttcaagttaagcttgctggtgatgaggagccgcctatgaggattgtcaagaactacaagaggcctgaggagagaatccctgcggagagggacccaacgaaattcgttgtctcaccaataactggggagctcattccaattagtgagatggaggagcacatgcgcatctcgcttattgatccaaaatataaggagcagaaagagcggatgttggcaaaaattaaggagacaacacttgctcctgatgatgaaatctccaggaacattgtgggtcttgcccgtaccaggccagacatctttggaacaacagaggaagaggtctctaatgctgtcaaggcagaaattgagaagaaaaaggatgaacagccaaagcaggttatttgggatggccattctggtagcataggtcgtactgccacacaggctctgtctatgggcggcgaggaacaggttgatgcttcgaatgttcctggtccagctccacttccccgccctcccatgccattgcttagacctcctcagccacttccactggttaatgttccacgctttcaacctagtgcaatgccatatcccccacaccaacaacctcatctcatgcaaggagttccacatatgatgcctaccatgcatccgcctccaccaccgccaataccaggtcagccgcaggtgattaggatgccaggttcaatgggtcctatgccaaccaatatacctccgcctccaccaggccaaaatccctacatgcctggcccgccgcgtccatactccatgcctccaccgccacacatgccaaccatggcaaccatggtcaaccccattgggattcctcagcctccaccacctttgcctccacaaccacctgctgaggagcagccacctcaacctgatgaaccagaacctaaaaggctgagaacagatgacgcttctcttataccagcagaacagttccttgctcagcacccgggccctgctcacatctcagtgtctgtacccaaccttgatgaaggaaacctgcgaggccaagtgttggagatcggtgtccaatcactctcagacacagttggcagtctaaaggagcagattgctggagagttgcagctccctgctaataagcagaagttgagcgtgcggactagtttcctcaaagacaatctcactcttgcttactacaacattggccctggagtggtgatcaatttaacactgagggagcgtggtgggagaaagaaatga</cdnaseq>

Protein Sequence

<aaseq>MGAAILPLPAPDGDGDSHPQQPPPPPPGGGAKPEPPPTVATHTR PLGIIHPPPDIRVIIEKTATFVSKNGPEFERRIISHNAGNAKFNFLQPSDPYHAYYQH RVSELAAAPPSAAASAADAAPEPDESGAAPPPADSAAAPTVDGEAAKADHSAPFRVPP PTKVLVPPKAELYTVHLPEGITGEELDIIKLTAQFVARNGKSFLTSLAQRESTNPQFH FIRPTHSMFTFFTKLTDTYSRVLNPVEGMPALLKDLQDGAKDLTTVLERCLNRLEWDR SQEQARQQAEDEIEQERMQMQMIDWHDFVVVETIEFADDECEGLPVPLTLEELKRRKR IEDLGEEEAAMELAEPAKDVEMEMDEEEIQLVEEGMRAARLEENEGGVQVKLAGDEEP PMRIVKNYKRPEERIPAERDPTKFVVSPITGELIPISEMEEHMRISLIDPKYKEQKER MLAKIKETTLAPDDEISRNIVGLARTRPDIFGTTEEEVSNAVKAEIEKKKDEQPKQVI WDGHSGSIGRTATQALSMGGEEQVDASNVPGPAPLPRPPMPLLRPPQPLPLVNVPRFQ PSAMPYPPHQQPHLMQGVPHMMPTMHPPPPPPIPGQPQVIRMPGSMGPMPTNIPPPPP GQNPYMPGPPRPYSMPPPPHMPTMATMVNPIGIPQPPPPLPPQPPAEEQPPQPDEPEP KRLRTDDASLIPAEQFLAQHPGPAHISVSVPNLDEGNLRGQVLEIGVQSLSDTVGSLK EQIAGELQLPANKQKLSVRTSFLKDNLTLAYYNIGPGVVINLTLRERGGRKK</aaseq>

Gene Sequence

<dnaseqindica>25..2133#2266..2535#ctaatccccctcgcctccgccgccatgggggccgccatcctgccgctcccggcgccggacggcgacggcgactcccatccgcaacagccgcctccccctcctcccggcggaggcgcgaagcccgagccgccgccgacggtggccacccacacccgccccctcgggatcatccacccgccccccgacatccgcgtcatcatcgagaagacggccaccttcgtctccaagaacggcccggagttcgagcgccgcatcatctcccacaacgccggcaacgccaagttcaacttcctccagccctccgacccctaccacgcctactaccagcaccgcgtctccgagctcgctgccgctcccccctccgccgccgcctccgccgccgacgcggcccccgagcccgacgaatccggcgccgcgccgccgccggccgactccgctgccgcgcccaccgtcgatggcgaggcggcgaaggcggaccactccgccccattccgcgtgccgccgcccaccaaggtgctggtgccacccaaggcggagctctacacggtgcatctgcccgaggggatcaccggggaggagctggacatcatcaagctgaccgcgcagttcgtggcgcgcaacgggaagagcttcctgacgagcctggcgcagcgcgagagcaccaacccgcagttccacttcatccgccccacgcacagcatgttcaccttcttcacgaagctcaccgacacctattcgagggtgctgaacccggtcgaaggcatgcctgccctactgaaggacctacaagacggggcgaaggacctgaccaccgtgttggagcggtgcctgaaccgcctggagtgggaccggtcgcaggagcaagcgaggcagcaggctgaggatgaaatcgaacaggagaggatgcagatgcagatgatcgattggcatgattttgttgttgtcgagacgatcgagtttgcagatgatgagtgcgagggactccctgtgccacttacgctggaggagttgaagcgtcggaagaggattgaggacctgggagaggaggaggcagccatggaattggccgagccagcgaaggatgttgagatggagatggacgaggaggagattcaacttgttgaggaaggaatgcgtgcagcaaggctcgaggaaaatgaaggaggagttcaagttaagcttgctggtgatgaggagccgcctatgaggattgtcaagaactacaagaggcctgaggagagaatccctgcggagagggacccaacgaaattcgttgtctcaccaataactggggagctcattccaattagtgagatggaggagcacatgcgcatctcgcttattgatccaaaatataaggagcagaaagagcggatgttggcaaaaattaaggagacaacacttgctcctgatgatgaaatctccaggaacattgtgggtcttgcccgtaccaggccagacatctttggaacaacagaggaagaggtctctaatgctgtcaaggcagaaattgagaagaaaaaggatgaacagccaaagcaggttatttgggatggccattctggtagcataggtcgtactgccacacaggctctgtctatgggcggcgaggaacaggttgatgcttcgaatgttcctggtccagctccacttccccgccctcccatgccattgcttagacctcctcagccacttccactggttaatgttccacgctttcaacctagtgcaatgccatatcccccacaccaacaacctcatctcatgcaaggagttccacatatgatgcctaccatgcatccgcctccaccaccgccaataccaggtcagccgcaggtgattaggatgccaggttcaatgggtcctatgccaaccaatatacctccgcctccaccaggccaaaatccctacatgcctggcccgccgcgtccatactccatgcctccaccgccacacatgccaaccatggcaaccatggtcaaccccattgggattcctcagcctccaccacctttgcctccacaaccacctgctgaggagcagccacctcaacctgatgaaccagaacctaaaaggctgagaacagatgacgcttctcttataccagcagaacagttccttgctcagcacccggtaatacttcttgatatatttcttctccactttcctgttttctactaaacattcttgttagtcttgttctttttgtatgcgtatattgaattttaagaatttccatgtgctaatttcttctcttccctgcagggccctgctcacatctcagtgtctgtacccaaccttgatgaaggaaacctgcgaggccaagtgttggagatcggtgtccaatcactctcagacacagttggcagtctaaaggagcagattgctggagagttgcagctccctgctaataagcagaagttgagcgtgcggactagtttcctcaaagacaatctcactcttgcttactacaacattggccctggagtggtgatcaatttaacactgagggagcgtggtgggagaaagaaatgagctttcttgtatctcagtgcactggcaggttattgcttgcaactgaacttgcagctataaaggagaatatttttgttggttgctgcctattaatttctgtattctcatgttatgtttaaacgtggtgaaacactgttatttgcactatttgaatgtcagacatacatatctcttt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0245000, RefSeq:Os02g0245000

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