Os02g0245800

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Revision as of 02:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0245800| Description = Similar to Inward rectifying shaker K+ channel| Version = NM_001052957.1 GI:115445284 GeneID:4328864| Length = 3260 ...")
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Gene Name

Os02g0245800

Description

Similar to Inward rectifying shaker K+ channel

Version

NM_001052957.1 GI:115445284 GeneID:4328864

Length

3260 bp

Definition

Oryza sativa Japonica Group Os02g0245800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8274174..8277433

Sequence Coding Region

8274174..8274315,8274400..8274585,8274672..8274704,8274801..8274899,8274991..8275230
,8276030..8276347,8276489..8276546,8276632..8276787,8276904..8277119
,8277226..8277395

Expression

GEO Profiles:Os02g0245800

Genome Context

<gbrowseImage1> name=NC_008395:8274174..8277433 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:8274174..8277433 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacccaagctcactcaaaatcttgcttccaccagttctgggatggactccagatcaagaggagcagcgatagcttcactgtagagctactgccatcccttggtgcaactataaaccactccaacaagttgcagaagttcatcatatcgccttatgatccccggtacagatcctgggagctgttccttatagtcctagttgtttactctgcctggatttgtccgtttgaactagcattcctgagggacttaccatctaagcttttgctagttgagaacattgtggatatattctttgccattgatattgttttgacgttcttcgttgcttatgtcgatagcaaaacacatcttcttgtggatgaccgaaagagaattgcaatgaggtacctatccacttggtttatctttgatgtatgttcaacagcaccatttcaaccaatcatccttctatttacacacaaggggaatgacattgctttcaaggtactcaatttgctcaggctgtggcgtcttcaccgagtcagttcactatttgccaggctggagaaagacatccgattcaactatttctggactaggtgctcaaaacttatttctgtgaccctcttcgcagtacattgtgcaggatgcttcaattatatgattgctgacagatatcccaacccagagaaaacatggataggagctgtgatgtcaactttcagatcagagagcttatggactagatatattactgctctttactggtccattacaacactgacaacaacaggatatggggacctacatgctgaaaatccaacagagatgctatttgatattgtctatatgatgtttaatctgggcttgacagcttatctcattggcaacatgaccaacctagttgtccatgggaccagccgcaccaggaaatttagggactcaatccaagcagcatcagagtttgcagcacgcaatcagctacctgagaacataaagcagcaagtgctatctcacttctgcctacaattcaagacagagggactcaaccagcaggtcatgttagactgtctaccaaaaggaatccgctcaagcatagcatacagcttattctttccgatcatccggcaagcctatctcttcaatggagtatctggcaatttcattgcagaactggtcatggaagtgcaggctgagtacttcccaccaaaggaagatataatattgcagaatgaaggagaagcagatgtttacatagtagtttcaggagcagtgaatataataacaacaatacatgggaatgagcaggtatatgagaaaattgcagagggagaaatgtttggagaggttggttctttatgtaacataccccagccatttacttgccgcacagcggagctatcacagcttttaagaataagcaaaacaaggcttagagagatcattgaagaaaacagggaagacagtaacattctaatgaacaacctagttcagaagctgaagctacgagaaagtttacctgacatgaatcaaccagaccgaagattcttgagcaagtatgagctattccacgttcctcgagaagcatggctgctgaaaaagtcacaactacattacacagagcacacaagtaggg</cdnaseq>

Protein Sequence

<aaseq>MTQAHSKSCFHQFWDGLQIKRSSDSFTVELLPSLGATINHSNKL QKFIISPYDPRYRSWELFLIVLVVYSAWICPFELAFLRDLPSKLLLVENIVDIFFAID IVLTFFVAYVDSKTHLLVDDRKRIAMRYLSTWFIFDVCSTAPFQPIILLFTHKGNDIA FKVLNLLRLWRLHRVSSLFARLEKDIRFNYFWTRCSKLISVTLFAVHCAGCFNYMIAD RYPNPEKTWIGAVMSTFRSESLWTRYITALYWSITTLTTTGYGDLHAENPTEMLFDIV YMMFNLGLTAYLIGNMTNLVVHGTSRTRKFRDSIQAASEFAARNQLPENIKQQVLSHF CLQFKTEGLNQQVMLDCLPKGIRSSIAYSLFFPIIRQAYLFNGVSGNFIAELVMEVQA EYFPPKEDIILQNEGEADVYIVVSGAVNIITTIHGNEQVYEKIAEGEMFGEVGSLCNI PQPFTCRTAELSQLLRISKTRLREIIEENREDSNILMNNLVQKLKLRESLPDMNQPDR RFLSKYELFHVPREAWLLKKSQLHYTEHTSR</aaseq>

Gene Sequence

<dnaseqindica>3119..3260#2849..3034#2730..2762#2535..2633#2204..2443#1087..1404#888..945#647..802#315..530#39..208#agagttgggtggccaagaacaagaacagcaaagcaaccatgacccaagctcactcaaaatcttgcttccaccagttctgggatggactccagatcaagaggagcagcgatagcttcactgtagagctactgccatcccttggtgcaactataaaccactccaacaagttgcagaagttcatcatatcgccttatgatccccggtacaggtgaggttcacactgcactttctgtacctatcacatgctgcaaggcatataagtaaacagcagttgctgacatgatctttgtttgctttgtctgtgtgtctctcagatcctgggagctgttccttatagtcctagttgtttactctgcctggatttgtccgtttgaactagcattcctgagggacttaccatctaagcttttgctagttgagaacattgtggatatattctttgccattgatattgttttgacgttcttcgttgcttatgtcgatagcaaaacacatcttcttgtggatgaccgaaagagaattgcaatgaggtgtgttcctgcgttactcattcctatgatactttcatgttagaaaccccacatttggaattgaaaaaggcccaaacgattctgccctgacattagcaaactacgatcatctgcaggtacctatccacttggtttatctttgatgtatgttcaacagcaccatttcaaccaatcatccttctatttacacacaaggggaatgacattgctttcaaggtactcaatttgctcaggctgtggcgtcttcaccgagtcagttcactatttgccaggttcaaaatcttgtccaggttctccataatttgatggcgaatcacaagtgacaactgcaacaatttaatcattctattttatcaggctggagaaagacatccgattcaactatttctggactaggtgctcaaaacttatttctgtaagtccttctgaacaaaagaaacttaccttctgtgttctgtgcaaaaatttttctatcttgcaaagtactagttatgtgcctataggaagaaataagctggttcttatgtgtataaaatatgtattgaccaaaatgcaggtgaccctcttcgcagtacattgtgcaggatgcttcaattatatgattgctgacagatatcccaacccagagaaaacatggataggagctgtgatgtcaactttcagatcagagagcttatggactagatatattactgctctttactggtccattacaacactgacaacaacaggatatggggacctacatgctgaaaatccaacagagatgctatttgatattgtctatatgatgtttaatctgggcttgacagcttatctcattggcaacatgaccaacctagttgtccatgggaccagccgcaccaggaaatttgtaagtttctctacttaccagcaaaaatgtcaatggcaaatcttctgtctacagaaagatcattcagaaatgtagtttttagtgagatttatatagtgctgaatgcagcagattatggcagacaagtgaaaattttagcatttggaatgccattacagatgtgatacactaccctttgatcataaaaatacaaataagctgcatatggatgccatacaaataaatgatgtcaaagatctgagaacaaactagcattttggttttatgcgtggtgggatgtatggttacatataaaatcatgcttattcaagagcatctacacagttatacaatttatatgaattgtgtcataggaattagttatatctaagacatccaggggatcaacaccctaagaactaagcaccatacattcataatatccaatgggtataagaactattatagtttcatttacaaaaaaaaatggtcatgctggaccattcttttaagttcttgtgcaaatggcagaggcgggttttcaaccatagagcaaagcaagggaataaatgaatagaatcctgttcttgtagtattccacaaggtacaagttcttgtatccctacgtcatttgaccattctaagggacaacaacatcaacaaaatatcattcaactcaagggcaagaatactaaaagaggtctgaagtgaatgcaaatagcatagtcatcattttaactaaaacggttactactaccagcattgttgttccaatatatgtactgctatattgatgatcctttaaaaaatatatgtgcagagggactcaatccaagcagcatcagagtttgcagcacgcaatcagctacctgagaacataaagcagcaagtgctatctcacttctgcctacaattcaagacagagggactcaaccagcaggtcatgttagactgtctaccaaaaggaatccgctcaagcatagcatacagcttattctttccgatcatccggcaagcctatctcttcaatggagtatctggcaatttcattgcagaactggtaaaatcatgaaataattcaatattttcgtagtaccatacaaaagcaatactttccagtctttactaattgaatatgttgaacaaaacaggtcatggaagtgcaggctgagtacttcccaccaaaggaagatataatattgcagaatgaaggagaagcagatgtttacatagtagtttcaggagcagtggttagtattctatctccaatttagttcagacatgaaatttcactaaggctttatctgtacgctaattgcgcttttcttaatgctttttctatgtagaatataataacaacaatacatgggaatgagcaggtacaggttttctctgtatatatctattccagatatcagtaagatttattcagatttaccaaaaattatgaattgtttgaaaacaggtatatgagaaaattgcagagggagaaatgtttggagaggttggttctttatgtaacataccccagccatttacttgccgcacagcggagctatcacagcttttaagaataagcaaaacaaggcttagagagatcattgaagaaaacagggaagacagtaacattctaatgaacaacctagttcaggtataacttcaattttattttcaaacaattatactgcattttttacagctaatcagaagttaacaactctattccaatgtacagaagctgaagctacgagaaagtttacctgacatgaatcaaccagaccgaagattcttgagcaagtatgagctattccacgttcctcgagaagcatggctgctgaaaaagtcacaactacattacacagagcacacaagtaggg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0245800, RefSeq:Os02g0245800