Os02g0247000

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Revision as of 02:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0247000| Description = Conserved hypothetical protein| Version = NM_001052963.1 GI:115445296 GeneID:4328870| Length = 6786 bp| Definition ...")
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Gene Name

Os02g0247000

Description

Conserved hypothetical protein

Version

NM_001052963.1 GI:115445296 GeneID:4328870

Length

6786 bp

Definition

Oryza sativa Japonica Group Os02g0247000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8328603..8335388

Sequence Coding Region

8332293..8332372,8332487..8332613,8333078..8333215,8333298..8333374,8333444..8333726
,8334714..8334839,8334947..8335064,8335207..8335388

Expression

GEO Profiles:Os02g0247000

Genome Context

<gbrowseImage1> name=NC_008395:8328603..8335388 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:8328603..8335388 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gcagtagatgaactattggcaaaaacatttgagaactatctgacctggtgcaagtttttggggagaaaaagcaacatatggttgccctctgtgaagcaggaaatccagcaacataaacttctgtacatatctctttatcttcttatatggggagaagcatcaaacttacgacttatgccagaatgtttatgctacatctttcatcatatgtcgtatgagttatatggagtactctcaggagctgtaagcttaattactggcgaaaaagtcagacctgcatatggaggagatgatgaatcatttttgaaaaaagtagtgacgccaatatacaaagagatatatgaggaatcactaaagaacaagaatggagtatctgatcactcaacatggagaaactatgatgacctcaacgagttcttctggtctgcagattgcttcaagcttggctggcccatgcgcctgaataatgacttcttttttacgtcaaacaaaaataagaattctcggcttcccattgttccaccagttcagcaaaccgagcaacaaatcaaccaattgagaacatctcagcaaactgatcaacaaaacacccaattgagaacatctcagcaaactgagcaacgaaacacccaattgagaacacccaatggatcctcatcgtttcaaaatatgctcaatcccgaagcaccggggcaaacacaacagcaaactacaagcgacacatctcaacagaagtggttaggaaagacaaattttgttgaggtccgatccttttggcatatcttcagaagctttgataggatgtggacactccttgtgcttgggcttcaggttcttataataatggcatggcatggattagaaagtcctctccagttacttgatccaataatttttcaggatgttctgagtattttcataaccaattcagtacttcgagttattcaagttattcttgatattactttctcatggagaaccaagagaacgatgagatttagtcagaagctaagatttgctgtaaaactttctattgctgtggcatgggccatcattcttcccatattttatgctagttcccaaaactacttgtcttgttcagctagacgacctaaaacttttctggggatc</cdnaseq>

Protein Sequence

<aaseq>AVDELLAKTFENYLTWCKFLGRKSNIWLPSVKQEIQQHKLLYIS LYLLIWGEASNLRLMPECLCYIFHHMSYELYGVLSGAVSLITGEKVRPAYGGDDESFL KKVVTPIYKEIYEESLKNKNGVSDHSTWRNYDDLNEFFWSADCFKLGWPMRLNNDFFF TSNKNKNSRLPIVPPVQQTEQQINQLRTSQQTDQQNTQLRTSQQTEQRNTQLRTPNGS SSFQNMLNPEAPGQTQQQTTSDTSQQKWLGKTNFVEVRSFWHIFRSFDRMWTLLVLGL QVLIIMAWHGLESPLQLLDPIIFQDVLSIFITNSVLRVIQVILDITFSWRTKRTMRFS QKLRFAVKLSIAVAWAIILPIFYASSQNYLSCSARRPKTFLGI</aaseq>

Gene Sequence

<dnaseqindica>3691..3770#3885..4011#4476..4613#4696..4772#4842..5124#6112..6237#6345..6462#6605..6786#aaaaaaaaaaaaatcgaaaccaaatcggagatcaaaagcgagcctgcatccatcagccgcgatcgcccaaaaaagcaaaagcccacctccgcctctgcgcccgccggcgaaaaagcggtaaagcttagtggcgaaggcgaaagccaaagccaccccaccctcgccggcataaaagccgccatggcgcagcctttgcgcgcggaagctggcctcctcctcctcctccatccttcttcctcctgtggccgccgcgatggaggtggagatcgtcgaggtggggccgtcgagccggccgctgcggtacgtgccggcgcagcagcggtggaggccgacaccgacgccgcttcctccgcctcctcccccgctgccacctcctcctgccgcctccgcggcgtcgtcgtcgggcgccggggacgcggcggcggttgcgtccgcggcgaatcagttcgacagcgagaagctgccgcagacgctggtgtcggagatccgcccgttcctccgcgtcgccaaccagatcgagcacgagtccccccgcgtcgcctacctctgtaagagctcctcgctcctcgtcccccgccccgcgccgccttgcgtctctctagttttcctgttctttttttttttttttttttttgtccctggtccgcctgcgacgtgttcgtcgaaatgccgaagacgaagtaaagggaacagtgaatgcgcttgagcgcttgaggcgtgggagtgggacggattggacgcttttgccgttttgagattctacccgagatgatggcgtatgagggggttaacgagacaggatagaagattcgaggtggttttggtgccacttgttccggcttgggaatattctgcgatactctctcgctggaaatgatggttagtgatccgagatactaccccgtgtttggtcatctgctgctgtcatgcatcttcctcaacctatgctcccaagattcctcgaagtgaaagagattgcttggcacataatcgtcgggaatattctggagttccctttaaggggaaaagaagagatagatatcagatgttagctgtctataatatccaatgttgaatggtctctgctaagattcacttgtcaattatctatcatgggcgaatcagttggagtttattctgcacggaacattattctgccacagctgttgcatgtgttcccatgattagctgagtgggtaggttgttggaagccttgagagttgaaacctgtggtgggtttacaagcaggcaagtcaaaggtaccatagtttgggttctaaaataaagcccttaaccttggttacagaagatctcttgtcctttcctttaggtgacataactcataatattgcatcactcaagtgctttccctgggaaataccgaatacctctaatacaatcttgttccaacctagttaaacctgtcccttttttttctttcacattgctgagcatttttttggtcaaaagtttatttccactgtccctttgtttttctttcacattgctgagcatttttttgttcaaaagtttatttccactatgtaacaaaggattgtaatcaatggatgctacaaagaaaaaggaagtcttgcctataagagtcacctgcaaaatactgaaaatgtgtcatttgacaggtcgatttcacgcctttgaaaaggctcatatgatggatccacgttcaacagggaggggtgttcgtcaatttaaaactgcacttcttcagagacttgaacaggtgcatatactgttgccagataattgcattcattcaaggtttgtgtgatgcatttaagcatcatttgtgtgcttagagaacttccctagttctgtaacacaaatgcacctttttttttcctcatagacatatcttgtcactaattagtactagtatcatcgttgattaagaatgtacctcatgttgtattttgttttcaaacaggatgagaaaagcacatttacaaagagaatggcaaaaagtgattctcaagagatcagattattttatgagaagtaagatttttttctcagatcatacaagtcggaactgtgtaatgtagactagtttctgcaacattattcaactcctgaacccaaaccaaaatgcgatttcattcctgtttctgtatctttttacaggaaagagaaagctgatgagcgtgaacttttgcctgtcctggcagaagttctgagggctgttcagattggaactggcaaggaggtaggatatatttacaaaacaagatttatttatgtaccaaatgctcaatatttaatgctttcaatgaaattgcagaaacagaaacgcattgctagcgaaacttttgcagataagtcggccttattccgatataatattcttcctctgtatcctggatcaactaaacaaccaattatgcttctccctgaggtttgccatattttttcctactgaaaatctcaaaaagtgttcttcagatttattgtgctaaaggacaattcagatatgacatgcttataataccaagcgaatcttcatgtttggtatggtaaaaaaagctctgaaactttcttcacactgggatctgtaccgagttgcccagatggaatttggaagaaaaatgatcagacctccttcctacaggatatatttgctctacaaataatgtggctaagtagcatagtaaagaatcattttttttaataaattaacagtctatgtaattttagtaccaaactttctcataacaaaaagcaatacattactctagtaatttacttgtcagaatcctaatacttttaacatgttaattatagcgtttgcagtatgcatttcaagtgaaaatgcatgaatcaacttgtgtgaagttaattataatctatacatactgcttttagaaaaaggtagtgatggtggtgaatatgctatttcacctctcaaccctacactttcaatatgaacttttaggaaaaggtatgctatattcttatttagccctgcgtttctttaatggaaatggagggctctgccctttgctcaaaaaaaaaaaaatcttatttagccttctaatatacaaatttaacatggaaagtttcaagataaccggattgccacatatatatatgtagtaggcaatctaatttatgactagaatatagagtttcgtaaaccttgtaaagtattcactgtaaaaacttgaattgtgtgttcaatgaatcttccatttgtttagaaaaatattaggacatgtataatttattttttatctacagcaaatgcatgtgtatttatctagtatacttttatacagatcaaagttgcagtgtgtgcggtgtttaatgttcgcagtcttccatttgctaacaccaaggatcacaaaaatcagatggatatttttctatggatgcaaagttggtttggattccaggtagactagttatttgtcttggtatttaattgtcagactagtaccaagtattgttctcatgcaaattgcatttcagctcagtattttttttttgttagaaaggaaatgttgccaatcaaagggagcatctcattcttttgcttgcaaatatgcatgctcgcttgaaccccaagtcatcctctgaaacaatggtattcatacgtgaatattttgctttgcctgtcttatttccttcatatagaataacattctaatatgtcttctttagcttgatgacagagcagtagatgaactattggcaaaaacatttgagaactatctgacctggtgcaagtttttggggagaaaaagcaacatatggtagactgtgttttatttctcaaaatacttgcacaaataactgaaaatcagttcaggcgcatttctaggaagtattgtcttaacaacaccacctctttgtattgcaatccacaggttgccctctgtgaagcaggaaatccagcaacataaacttctgtacatatctctttatcttcttatatggggagaagcatcaaacttacgacttatgccagaatgtttatgctacatctttcatcatgtaagtctttccacttcatattttctctgtgcttgcaatgtactagtgattcgaaactacagtttatattggatctttcttcaaatcatttatgaacaatagatttatgcttaagttgccttgtctgtgcagctaaatttgcattggtggcaaataaaaataccatgtaaatgtagtttttgtttagttctatcctgttttatgtagtactactttttgaataagtatttctttagcaaactcttaacgtctgattagtttctgtcttcccagataaagttcttgctaaaaggagttgatctagataactagtgcttttatgtgtttctaattaaagaaacaaacctacttcacttgttctaagcagtatatctgggttctccagtataaatgaggcacagaatttttggcccaaaaggtgttctcactttgagagataaaggtaaccacacttcctgtttcagatgtcgtatgagttatatggagtactctcaggagctgtaagcttaattactggcgaaaaagtcagacctgcatatggaggagatgatgaatcatttttgaaaaaagtagtgacgccaatatacaaagagatatatgaggtctgatatcattttcttttcaacttctcaactcagctttgcaattttgaaatgaaatgctcatctactttatctaatgaaggaatcactaaagaacaagaatggagtatctgatcactcaacatggagaaactatgatgacctcaacgagttcttctggttagatactatgctttattgggtaatagcttttgctagtaacaggtactaatttcttttacggtgcaggtctgcagattgcttcaagcttggctggcccatgcgcctgaataatgacttcttttttacgtcaaacaaaaataagaattctcggcttcccattgttccaccagttcagcaaaccgagcaacaaatcaaccaattgagaacatctcagcaaactgatcaacaaaacacccaattgagaacatctcagcaaactgagcaacgaaacacccaattgagaacacccaatggatcctcatcgtttcaaaatatgctcaatcccgaagcaccggggcaaacacaacaggtacttattacctgaagaatgactgttcctcgaacattgcaatatttcgatcatatatataggattatgtacttatcccacactaaacattgagaacataatagctaattggctaaataggttgatatccactagcatctatgatgctggttgtttcatgcatgtgctagttttaatatttaaattttgttatatgtttttgtttattttttggggttaatcatagaactattgttctgtagtgagtaaagctactccctctgtcccaaaatgttttcacaatctcagatgtagaactttggctatggattttaatcatgatatgcaataaaaaaataatatactatcatatattttggaagtatattgtatgaaaaattaattatatagtatttccttcatgtataaagttgattgacttcattgtagggtgacttcaattttggaaaaggtggtgggggtacattttagtttaagaggacattgcaatgctttactgttataaataactaatatgaattcccatgtcctcaagcttaccatatcataactttctacaaagtaactcatcaagctgttgtcatgacttgaagccatgacaagataaccaccgccggaggagagccgggcgatgtcggctaccggggaaaggatgtagatttagactagggagagaatattggggagagagattagactaattgatattcattgcttaacgataatagacacaatcccatccttatatagatggaataacttgactcctaagtaagaactctatctaatcttatcttaagcaatcttatctctaacttgcctggtgtgggctgcctatgggcctcggcctttcggcctaatgcccatgacaaaagtttaaggctttttctgtacattaacatctcacatatgcatagatttaagtgtatttacatgagtataattgttcactagcttttgtttaatttttcctggtattgcatatagcaaactacaagcgacacatctcaacagaagtggttaggaaagacaaattttgttgaggtccgatccttttggcatatcttcagaagctttgataggatgtggacactccttgtgcttgggcttcaggtttggttcttacattaatagttatgaagtgtatacttctataattaatctcattcttcttattctgtcggaacttttggcgcattttgttgttgattttatttcaggttcttataataatggcatggcatggattagaaagtcctctccagttacttgatccaataatttttcaggatgttctgagtattttcataaccaattcagtacttcgagttattcaaggttaatttgacttttcatttttcttatgtatgttattgattgccttgcttcgatgaattagttcttaatatactgatatatctatttcgttaattccttgtgctctatcttcactcttctgtgatatacttcttttgtgcagttattcttgatattactttctcatggagaaccaagagaacgatgagatttagtcagaagctaagatttgctgtaaaactttctattgctgtggcatgggccatcattcttcccatattttatgctagttcccaaaactacttgtcttgttcagctagacgacctaaaacttttctggggatc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0247000, RefSeq:Os02g0247000