Os02g0249000

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Revision as of 02:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0249000| Description = Similar to Glutelin type-B 2 precursor| Version = NM_001052970.1 GI:115445310 GeneID:4328877| Length = 1880 bp| Def...")
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Gene Name

Os02g0249000

Description

Similar to Glutelin type-B 2 precursor

Version

NM_001052970.1 GI:115445310 GeneID:4328877

Length

1880 bp

Definition

Oryza sativa Japonica Group Os02g0249000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8435809..8437688

Sequence Coding Region

8435836..8436267,8436388..8436840,8436973..8437235,8437345..8437651

Expression

GEO Profiles:Os02g0249000

Genome Context

<gbrowseImage1> name=NC_008395:8435809..8437688 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:8435809..8437688 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcaactactacctctctattgtcttcctgtctctgtgctcttctcttggctccgctctttagccaaggtgtagatgcatgggaaagccgacaaggggcttccaggcagtgcagatttgataggttacaagcatttgagcccctaagaaaggtacgatcggaagctggggacacagagtactttgatgagagaaatgagcagtttcgatgcgctggtgtctttgtcattcggcgcgtgattgagccacaaggccttgtggtgcctcgatactcgaacactcctgctctagcctacataatccaaggaaaaggttacgtaggattgacttttcctggttgcccagcaacacaccaacaacaattccaactatttgaacaaagacagagcgaccaagctcataagtttagagatgagcaccagaagattcacgaatttaggcaaggggatgttgttgcacttccggctagtgttgcacattggttctacaatggtggtgatacaccggctgttgttgtctatgtttatgacataaaaagttttgctaatcagcttgaaccaaggcagaaggagtttttattagctggtaacaaccagagagggcaacaaatatttgaacattccatctttcaacactctggacaaaatatatttagtgggttcaatactgaggtacttagcgaggcccttggaataaacacggaggcttccaagaggctccaaagtcaaaatgaccaaaggggagatatcattcgagtgaagcacgggcttcaattgttgaaacccacattaacacaacgacaggaagaacatcgtcaatatcaacaagtccagtatcgtgaaggacaatataatggattggacgagaatttctgtacaataaaggcaagggtaaacattgaaaatcctagccgcgctgactactacaaccctcgtgctggaaggataacccttcttaacaaccaaaagttccctattctcaaccttattggaatgggtgctgcaagagtaaacttataccagaatgctcttctctcacccttctggaacattaatgcccatagtgtagtgtatatcatccaaggaagtgtgcgagtacaggttgccaataatcaaggaagatctgtgtttaatggtgtacttcatcaggggcaactattaatcataccacaaaaccatgccgtcattaagaaagccgagcacaatgggtgccagtatgtcgcaataaagacaatttcggaccctacggtgagttgggttgctggaaagaactccatattacgtgcattgcctgtagatgttattgccaatgcttatcgtatctcgagggatgaagcccgacgtctaaagaataatagggcagatgagattggcccttttactcctcgtttcccccagaagagccagcggggttaccagttcctaactgaaggcctctctttaatcggcatgtaa</cdnaseq>

Protein Sequence

<aaseq>MATTTSLLSSCLCALLLAPLFSQGVDAWESRQGASRQCRFDRLQ AFEPLRKVRSEAGDTEYFDERNEQFRCAGVFVIRRVIEPQGLVVPRYSNTPALAYIIQ GKGYVGLTFPGCPATHQQQFQLFEQRQSDQAHKFRDEHQKIHEFRQGDVVALPASVAH WFYNGGDTPAVVVYVYDIKSFANQLEPRQKEFLLAGNNQRGQQIFEHSIFQHSGQNIF SGFNTEVLSEALGINTEASKRLQSQNDQRGDIIRVKHGLQLLKPTLTQRQEEHRQYQQ VQYREGQYNGLDENFCTIKARVNIENPSRADYYNPRAGRITLLNNQKFPILNLIGMGA ARVNLYQNALLSPFWNINAHSVVYIIQGSVRVQVANNQGRSVFNGVLHQGQLLIIPQN HAVIKKAEHNGCQYVAIKTISDPTVSWVAGKNSILRALPVDVIANAYRISRDEARRLK NNRADEIGPFTPRFPQKSQRGYQFLTEGLSLIGM</aaseq>

Gene Sequence

<dnaseqindica>1422..1853#849..1301#454..716#38..344#aatcacatcgatcaaattttaacttctccaaatagctatggcaactactacctctctattgtcttcctgtctctgtgctcttctcttggctccgctctttagccaaggtgtagatgcatgggaaagccgacaaggggcttccaggcagtgcagatttgataggttacaagcatttgagcccctaagaaaggtacgatcggaagctggggacacagagtactttgatgagagaaatgagcagtttcgatgcgctggtgtctttgtcattcggcgcgtgattgagccacaaggccttgtggtgcctcgatactcgaacactcctgctctagcctacataatccaaggtttgtgagggcacaaagatattcacatggatatcacaattttatagcagtcaaatatgaaacacatgtttgcctttttataatagtaatgtacatgtgcttattgcaggaaaaggttacgtaggattgacttttcctggttgcccagcaacacaccaacaacaattccaactatttgaacaaagacagagcgaccaagctcataagtttagagatgagcaccagaagattcacgaatttaggcaaggggatgttgttgcacttccggctagtgttgcacattggttctacaatggtggtgatacaccggctgttgttgtctatgtttatgacataaaaagttttgctaatcagcttgaaccaaggcagaaggtatcaattttatattcattatcctccccaatcggctttgttcatttttgaatactctgaattgtgctttttctttagatttacttcattcattagcaagccattccatttattttttactcaaatgtttaggagtttttattagctggtaacaaccagagagggcaacaaatatttgaacattccatctttcaacactctggacaaaatatatttagtgggttcaatactgaggtacttagcgaggcccttggaataaacacggaggcttccaagaggctccaaagtcaaaatgaccaaaggggagatatcattcgagtgaagcacgggcttcaattgttgaaacccacattaacacaacgacaggaagaacatcgtcaatatcaacaagtccagtatcgtgaaggacaatataatggattggacgagaatttctgtacaataaaggcaagggtaaacattgaaaatcctagccgcgctgactactacaaccctcgtgctggaaggataacccttcttaacaaccaaaagttccctattctcaaccttattggaatgggtgctgcaagagtaaacttataccaggtaatatgggtaatgatgattacaatgctattataacaatcattttttttggtgcaaaatctataatatgtaacgttgttgagataatggcataacccgaccttttcccacttactgcagaatgctcttctctcacccttctggaacattaatgcccatagtgtagtgtatatcatccaaggaagtgtgcgagtacaggttgccaataatcaaggaagatctgtgtttaatggtgtacttcatcaggggcaactattaatcataccacaaaaccatgccgtcattaagaaagccgagcacaatgggtgccagtatgtcgcaataaagacaatttcggaccctacggtgagttgggttgctggaaagaactccatattacgtgcattgcctgtagatgttattgccaatgcttatcgtatctcgagggatgaagcccgacgtctaaagaataatagggcagatgagattggcccttttactcctcgtttcccccagaagagccagcggggttaccagttcctaactgaaggcctctctttaatcggcatgtaaaacttatagattatgagtactatgcaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0249000, RefSeq:Os02g0249000