Os02g0250300

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Revision as of 02:22, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0250300| Description = Bromodomain containing protein| Version = NM_001052978.2 GI:297598919 GeneID:4328885| Length = 7610 bp| Definition ...")
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Gene Name

Os02g0250300

Description

Bromodomain containing protein

Version

NM_001052978.2 GI:297598919 GeneID:4328885

Length

7610 bp

Definition

Oryza sativa Japonica Group Os02g0250300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8519393..8527002

Sequence Coding Region

8519617..8521419

Expression

GEO Profiles:Os02g0250300

Genome Context

<gbrowseImage1> name=NC_008395:8519393..8527002 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:8519393..8527002 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcgtcccctcctggcgccggcgccggcggggaggagcggcccgcggcgagccccgcggccccggccgtggcggaggcggtggaggaggggccggtgacgtcgcggtgggcgccggagatcagggtgtaccggcgcaagtacccacgcaaaaaccctaaaccccctccgaaccctagccctagctccagccccctcgcgcaaaccctagcctcgattcggaggtcgattcgccgccccgaggatgggcctgcggcgcctcggcctgatccgcccgccgcgcccgcttcctccccccatccccctccgccgagcgccccggttgcccccgcgcagcagggggagcccgccgcgcccgcttccgacgacgtctccgcggggcctaatcgggacggcggggccgttcccaacggccatggagacgtccgggcggccgccgaggagaaggcgcggaagcggagggcgcggagcgagctgcggcggcagcttgcgtcggagctcgaccaggtgcgtgggctttccaagcggctgaaggcggccgctgaggccatcgcggctgagtctgcagcggcccttgctttgcctgtggtggtgccgccgcctcagcttcctgttgggtatgcgcactcgcagttcgcactcgctgatcctgtgacgcccatacctggtcaagttgctggtgctattgttccggtccgctcagtgatgcagcgcgggccactaaccgtgtcagtgactcacacagagtccttcgagaaggagaagcggacaccaaaggcgaatcagttgtatcaaaattcagagttcttgcttgccaaggataagtttccgccttcagattcacatggtcgtaagaaacccaagcaccacaagaagaagcatcgttccttagcatctcatggtgctggttatgatgctgagcagaggctatactctcatgcttttaagaaatctatgtcgctgctttctaggctaatgaagcacaaatttggttgggtgtttaacaagcctgtagatgctgttgcgcttggtttgcatgattattttgctattatcaagcacccaatggatcttggcacgataaagacccgactcacgcatggccagtacaggaacccgagggagtttgctgatgatgtacggctgacgttccataatgccatgacctataatcccaaggggcaggatgtgcatttcatggctgagcagttgttgggaatctttgaggcgcagtggcccgaaattgaggctgaggttcagtaccttgcctcatgtccgccattgccaaataagtttccacctccaccaattgacgtgcgcttccttgatcggtcagattctgtaaaacaccatatggtgttggactccaagtcaaggccattaagtcatactcccacttatagtgccaggactccatcgatgaagaaaccaaaggccaaggatccggataagagagatatgacaatagatgagaagcggaagcttagtaacaaccttcagaatttgccaccggagaagcttgatgttgttgtgcagatcattaagaacaagaatctgtctgttagacagcatgatgatgagattgaggttgaaatagatagcatggatactgagacactttgggaacttgatagatttgtggccaactacaagaagaacctgagcaagcaaaagaggaaggctgagcgagccatgcttgcaaggcaggatgcagagttgcatgcacaacatgttgccccacaacaaccagtatgggcattcaatcattcctattcctattctataagtagcactatatag</cdnaseq>

Protein Sequence

<aaseq>MASSPPGAGAGGEERPAASPAAPAVAEAVEEGPVTSRWAPEIRV YRRKYPRKNPKPPPNPSPSSSPLAQTLASIRRSIRRPEDGPAAPRPDPPAAPASSPHP PPPSAPVAPAQQGEPAAPASDDVSAGPNRDGGAVPNGHGDVRAAAEEKARKRRARSEL RRQLASELDQVRGLSKRLKAAAEAIAAESAAALALPVVVPPPQLPVGYAHSQFALADP VTPIPGQVAGAIVPVRSVMQRGPLTVSVTHTESFEKEKRTPKANQLYQNSEFLLAKDK FPPSDSHGRKKPKHHKKKHRSLASHGAGYDAEQRLYSHAFKKSMSLLSRLMKHKFGWV FNKPVDAVALGLHDYFAIIKHPMDLGTIKTRLTHGQYRNPREFADDVRLTFHNAMTYN PKGQDVHFMAEQLLGIFEAQWPEIEAEVQYLASCPPLPNKFPPPPIDVRFLDRSDSVK HHMVLDSKSRPLSHTPTYSARTPSMKKPKAKDPDKRDMTIDEKRKLSNNLQNLPPEKL DVVVQIIKNKNLSVRQHDDEIEVEIDSMDTETLWELDRFVANYKKNLSKQKRKAERAM LARQDAELHAQHVAPQQPVWAFNHSYSYSISSTI</aaseq>

Gene Sequence

<dnaseqindica>225..2027#gcacacgacccccccgacccgacgccgccaccacccacccccgtcgcagcagctcacccccacctccaccgccatagccatagccaagccgcgggagctccaatccgagtcgaccccggcggattccggcagggctaggcgcgaatccctcgccgcggcggccgcctgcatcgatccggggcctcgcgggaggggggggaccggatttagggtttaatttatgcatggcctcgtcccctcctggcgccggcgccggcggggaggagcggcccgcggcgagccccgcggccccggccgtggcggaggcggtggaggaggggccggtgacgtcgcggtgggcgccggagatcagggtgtaccggcgcaagtacccacgcaaaaaccctaaaccccctccgaaccctagccctagctccagccccctcgcgcaaaccctagcctcgattcggaggtcgattcgccgccccgaggatgggcctgcggcgcctcggcctgatccgcccgccgcgcccgcttcctccccccatccccctccgccgagcgccccggttgcccccgcgcagcagggggagcccgccgcgcccgcttccgacgacgtctccgcggggcctaatcgggacggcggggccgttcccaacggccatggagacgtccgggcggccgccgaggagaaggcgcggaagcggagggcgcggagcgagctgcggcggcagcttgcgtcggagctcgaccaggtgcgtgggctttccaagcggctgaaggcggccgctgaggccatcgcggctgagtctgcagcggcccttgctttgcctgtggtggtgccgccgcctcagcttcctgttgggtatgcgcactcgcagttcgcactcgctgatcctgtgacgcccatacctggtcaagttgctggtgctattgttccggtccgctcagtgatgcagcgcgggccactaaccgtgtcagtgactcacacagagtccttcgagaaggagaagcggacaccaaaggcgaatcagttgtatcaaaattcagagttcttgcttgccaaggataagtttccgccttcagattcacatggtcgtaagaaacccaagcaccacaagaagaagcatcgttccttagcatctcatggtgctggttatgatgctgagcagaggctatactctcatgcttttaagaaatctatgtcgctgctttctaggctaatgaagcacaaatttggttgggtgtttaacaagcctgtagatgctgttgcgcttggtttgcatgattattttgctattatcaagcacccaatggatcttggcacgataaagacccgactcacgcatggccagtacaggaacccgagggagtttgctgatgatgtacggctgacgttccataatgccatgacctataatcccaaggggcaggatgtgcatttcatggctgagcagttgttgggaatctttgaggcgcagtggcccgaaattgaggctgaggttcagtaccttgcctcatgtccgccattgccaaataagtttccacctccaccaattgacgtgcgcttccttgatcggtcagattctgtaaaacaccatatggtgttggactccaagtcaaggccattaagtcatactcccacttatagtgccaggactccatcgatgaagaaaccaaaggccaaggatccggataagagagatatgacaatagatgagaagcggaagcttagtaacaaccttcagaatttgccaccggagaagcttgatgttgttgtgcagatcattaagaacaagaatctgtctgttagacagcatgatgatgagattgaggttgaaatagatagcatggatactgagacactttgggaacttgatagatttgtggccaactacaagaagaacctgagcaagcaaaagaggaaggctgagcgagccatgcttgcaaggcaggatgcagagttgcatgcacaacatgttgccccacaacaaccagtatgggcattcaatcattcctattcctattctataagtagcactatatagttaattgaattttatgattggtgctgaaagttacagtttcttggattgcagagtcaagagcctaatattggtgtaaaatctccaaagcaaagtaagttagatctgctctattttgtacttcatctaattgtccaagtcaattgccaggaactatggattatggaagcaatataatttacttattttcttatatgagcagatttgattgtggatgagaaattagctacttctgtgccagaacaagctgataataatggacaaaatgcaagtagatcgagcagctctagcagctccagcagtgatacaggatcctcttctagtggtaatatttctttctgcccttggttttgctcatcatattttggtatttacagtatatatatctaccagctgtagacatttgagttagtgtgtaatcaattaatattctttttggcagactcagacagtgatagctcctcttcagatggatcagatgccgccaattcatcttgaaatgtaggtaggttttattaagtagtttttgtgttcttattgctgtatttgtttcactataatctaacctagtgagttaatttaaggtttttctgttattattgagttcctacttttaatttatgtctcaatgatcctattgatggcagtctgtttctccaatattgctggtggttattcaaataaatccattcttgtgcaaacatagacatttttatttctgtgaaatcaatatagttaagtactatttatactatactccgtgtgaaatcgtatgtattcacatctctgtatgttttaggagaaatttagaatgttcctatctgacatgctaatgtgaatatattgattcgtaagcatgcgtaccaggagtataccatggtaaagctcaactcataaaatatgttaatctgaactagttaattacccactcttaattgattatatagtcaggctgactgattttaagacttaccaccctctagcgtagaactgggactctgggagggcatctacttggcatgtacatctagctgtaagccaaactggatgattttatgaaagcacagttcaactgaatggatgtaaaaaatcttacgagatgcatacaatggggaagtctttgtgtttcctttctctgtaaactcagatggtcgaggattcatctgataatttgtaactcataagatgggagtgaaattgtggttaacaagctgacatgttatgtatagcccaagatttggaatttgggaaggtggagaaatagaatttgtagtttcttaggaagggattagttccagtttgttatgcttccatatgttaacacttagttttcctaatcctaaaagataatttctatttattgggttcctcaaaagtttctatccattaattgttcagatggctgtataggaaggcatccttatattaatgagcaatggtaacagaaagatgcactgagaaaagaagtttcatattttcctcttgttcttctagattgctttagagccttgtgtctacagcaagagtacgcctcccagtagacaaatcaagggtcagagtcagtgccctatcctggtttatcgggtccttatcctgtttcacattacaagaggtacttgtgggtttctctcctaggttcagggggtcaattatatttcaggcaacgctacaaacttgatggttttagtgtgtcaagctaagcagaaaaacaagagattatcatgtttgtggactagatgcagggccccttgtgtttactgacgtccaaacagggttagggtattctatctgtgttatggtttctggagccatagcattaaaagccagactggtcatcaggtcagactctcggtttgttgttctgacagtctgaccggaggaacactggttaagctgtggttaaaagaaacttcaaatatactccctgcttcccaaaatataaggtgtgttagccttttacagagtctccaggagtatactttgaatcttttttaccattaatttattttgtaatacattatcgacaactaagaaattaatatcatatgaaagtacattctaatacgaatctaatgatatcacatgcgtggcaataaaaatatactttaattattagtaaaaaaacacatttgactgttctaacaataagggtgctttgtattttgggatggaaagagtatttaatattccttcatggacacaacaaagataccacctgtccagtctgtcagttcatattatgcctagaggcaggtggatatgagtctgctcacatttctctttaatatcacagcgctatattatggtaagcattcccccatttggaatgcactttgcatcgcttaacaatgtttgtgacatctgtcatcacatccaactagtattcactaaggccctaggtgtgtctgttggaggactggcgcctggtaatcagccgtatagattggataaatcggctaggtgagtaaggcttgaagttgaaggtgtcagcactgcaagctacctcggcatgaggaggctaggcgtctgcctttcagaatgctgcctccaaggcttcaactatcattagttagtacaagagagtatgtttgtccagtttggcctgagtcagaaggcgttggggtcattggagtcgatgacggttaactcatagctagaaaggttcaaaatatctccactgatccaaatcttgtctagctctagctcgattgttgctcttcgtgagtattttcaataataacttcatctcaaattggtatttgataatacgaccaattcacgcaagcacatccccatgagtgttttagtgcatacttctaattcacttcatgtgcaattatgtgcatgagcctgtgctctctgcgcaaacagttcccgacaaccctttctaccatacatgaaaatcttgttttgtttgacactaaacattctcatgaggatgaattgcttcattgtactcctacagtgtagtagctgaatgccatagccatcttgaacacttgtgcgacacattctcaaaaaccttgtggatggtggctacattgttaaacctaggataggatggggagggtcacagttacagaaatgcagtttgtctcagcaaagccacgatattttggtgtcctagatcaaatgccatgattcaaattggagatgccatttgttccccaaagactcattcattccttttcaaattctttcttatggatcattggatcctacccattgcaaaacacaacaaaacatgacacttatcatacatggctacatgagaaactattttaacctcatttatgaatacatattatgtaatgattgaaatgtttgtcttagccattcaaatcttcttttgtcacaaagcttttaattcttagttcctgctaactggaaacacattttctttgcactgggcatagtacgaaaagttagtctgatggccagttccggtttaactgcagttcacggaatttgaattatagtgtatgttccatttcaaatgcaagttgatggtggtggggtggtagtggtgacgttttcagtttgaagacccatgcttgaaccccttcatccttttttcgcttgatagttgatacaagttgtgtgcctggatgttctgttaggccttgctttggccccattctctgctatagccatgcttttcaggtccaccagcattttctggaatgttgcctggttcagagtgaagctgcctggtctatccagttcaaagtgttccatatgcatgagtggtcttagcagatcagactgagcacaacaccaattccagttaaaactgcttgtctggtccagcttttttcaactatggcactgggattgagcaatacctgtttcttccttcttttttaagatttaagatagtaactcggggatttattctctctccatcatgtggagtgctatgtataagccattttcacttggttgaatttgcctaatagaagaatttttgccagttggaagaatggaggtatggcagtaaaaacaattaaacagatgtgtgtaacatccctactacatccagacatttataatatggttacataacaattggagaaaggtctatctcctttaagtaaagaactactaagaaatgatgcctgcactgaaattcatatttacagagcaataatttatctttagaatatcccttaagtgcttcagtttgttgtggtaatcaattatttactcactgctataatgtgtttaacttcttgtctgtttccttctggagttcctttcttcatcctgtagtcattctacttggttttgccttgctgtgcttcttgataaaataataagtacgttgaggaccttcctgtgctttagtttgcttgtgcttttattcttactagtaaattgtggtgttatgctaggatggccatctgaagaccttttcagagttaaaccttggtgcttgcaacctatttatgcatcagtattcttttatgaagaaatcctgcaaatgatatagacccaagtctttggttgattggcagtagtcttccttcatacagttacacttggtctcaatgagaaaaagaatcaaaaacaaatttaaaaccctgtagtctcatagttgtctctcttgcatagggacttagtataatcgagtttctttcctgatatgatcacatgagctagcagcccgattaattggtgccaaacacttaggttacttttctcagtcaccattttcagagctttaggagttgacagtgtcatttcgaatatctgattcatcattttttgtgatatgtactttcatatgcttataaatgtgcattttggaagtatggaactgtgagagtcagatgattgttgcttttagcatagactctgtatagtactttgggtgtgtgaaagtaataatttagccttttataggcggaattggagtcgcttgtcagagcgtgacaatcttggctgcatagatttattgtacatgcgagggtgtgcagttgatcactgcatctgttgatcctgctttttacctgctatagcaaccctagtggtttcattaaaacatatttggacctattagctctgttccatgactgtctaggtactttagttctataagtggctctgctattctctaattggttcactcataacgttcaccttctcctgaattgcagattcagaacttcatccaatgaagaataactgtctaattgtatttggcatgacaatgcctcagcaagactcaagacatgcctatcttcgtctatctaggaaatctccgagttgcagctaggatgtcatccgaaggcaggattctgcaaaggcctgctgagcctgatacaagttccattctgctgcttctgtgtacttatgattgtaggttaactttgtacactagtccattttcatttgtttggcagcagagtgcagctgtattatatgcaccttggcattatggatacccccagctgaaggcaaggtattcactaggctcagatccaataagacaggcatgcatgctgacgctgatcttatctgggtaggagttctgtagcctgtagattagccacagctggagcattatttacgttttgccgcgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0250300, RefSeq:Os02g0250300