Os02g0252400

From RiceWiki
Revision as of 02:23, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0252400| Description = Similar to Zn finger protein (Fragment)| Version = NM_001052986.1 GI:115445342 GeneID:4328903| Length = 3448 bp| De...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0252400

Description

Similar to Zn finger protein (Fragment)

Version

NM_001052986.1 GI:115445342 GeneID:4328903

Length

3448 bp

Definition

Oryza sativa Japonica Group Os02g0252400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:8619316..8622763

Sequence Coding Region

8619636..8620757

Expression

GEO Profiles:Os02g0252400

Genome Context

<gbrowseImage1> name=NC_008395:8619316..8622763 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:8619316..8622763 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcggcggcgcattatccccggtggaggagaagcccacggtggtgaagacgaccaaggcggagcagcacgaggaggaggcggcggtggcggtgaagagcgcggcggagatgatgaagaagagcagcccgtgctgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgcaacgtccccgtcggcggcggctgccgcaagagcaagcgctcgtcggcctcgtcggcgtcggcgtcggcggcgtctcctcctgctcctgcggtgggcgccgcgccaccggtggtgccggcgctgtcgtcggcgatcagcaagctgctgcagtcggagcccatggcggcgccgtgcgcggacttccccaacgtgctcccgaccttcgtgtccaccgggttcgagctccccgccgccgccggcgaccgcctctcgctggggtcgttcggggcgttcggcaacctgtcggcggcggtggcggctcccggcggtggtggtgggtcgtcgacgaccacgtcgttcatggacatgctgaggggagttggagggcttttcgacggcgtcggcaacagccatcagatgggcggcaatggcggcggcggaggcagctactacgcgcctctcatcaccggcgccggcaatggcatgctgatgccgccgccgccgctgccgccattttctggttctctgatgcagcatgggatgcaggggctgttcgccaatcatgcgatgggaggaggtggtggtggagtgatgaacgccggcgaggacggcagcgtgatggcggggctgggaggaggccagtggccgccggcgcttggtggtgcagacgagcagcagggcggcggcgacggtggcgaagctgtgatgacgaaggacaccggcggcggcgcatcgtcgtcggcgtcgaggccggactacttctacggctggaacagcgccgccggcggcgtcgtcgctggaggcggcatcggcggcaacgccgccgctgccaccggagcaacgccatggcagggcctcatcgacagcagctcggccatgatgtaa</cdnaseq>

Protein Sequence

<aaseq>MASGGALSPVEEKPTVVKTTKAEQHEEEAAVAVKSAAEMMKKSS PCCPRCNSIKTKFCYYNNYSMAQPRYFCRECRRYWTQGGSLRNVPVGGGCRKSKRSSA SSASASAASPPAPAVGAAPPVVPALSSAISKLLQSEPMAAPCADFPNVLPTFVSTGFE LPAAAGDRLSLGSFGAFGNLSAAVAAPGGGGGSSTTTSFMDMLRGVGGLFDGVGNSHQ MGGNGGGGGSYYAPLITGAGNGMLMPPPPLPPFSGSLMQHGMQGLFANHAMGGGGGGV MNAGEDGSVMAGLGGGQWPPALGGADEQQGGGDGGEAVMTKDTGGGASSSASRPDYFY GWNSAAGGVVAGGGIGGNAAAATGATPWQGLIDSSSAMM</aaseq>

Gene Sequence

<dnaseqindica>2007..3128#ctcctcctcttcttcatcgtttcgcttagcttttctttcttcttcgtcgtctcggttcactcctccgttcgatcgactttgcttgtttcaagcaagctagatctctcaccaacaggtacttatgtttctccggcgtcttcgctttctcccctttttttttgttgaaaagatcttcgctttcttcttttgattgtatatatatatatatatatagtcttgttggtagtcttcaagaagtttgatttaactatttcttgatctatttgcgactagattctatatatacgcaagagtattacatgtatttgtatgtgtttcacttcattcggttgttcttttgcatctacatgaacacatatgggttcctatatatctagctatggatcgatcttggtatgcgtacaaaaattcatagtccagcaccatctacctatatatctaggattctagggtggtgttcagctagcatgatctcaaatcgatttgtttcttttgctcggtctatggttcaattacttgtaaaagtttcgaaagaaatcaacgctgcatccaaatgatttggtattccctttattatagtttaattttgaaacctcttcatctcttgattttgcggtgagcgatcaataagtacgctatttcaaaaaaaatcctcatattattccttgttcatccatgtatgcacgagaattctgtagctagttgtcacacgcatagatttgtcgcgcatagaaaataagtcttactaggaattgtcttatctcgtcagttttggtcgtacgcaagcaacagttatgaaacagtccaagaaaataagccgtaacgtgtttcctcgaatcgcgggtggacagaaagctaaaaataatcgaattaacgcctattttgtcacatattaaattaagcatattaatttcctccaaagaaatttgtgttcaatttcttgcgctaagtccgcgtgaaaaaaaaaggaatcaacctccctattctagcactcatttctatttcaaaatatggaaaggaaatgaaagaaagcaaaatcccacatatgattatacttggttttcatagggtaacataattaattaattgtttgatcacacacaaacaaacacacacacacacacacacacacacacaaatataaacacacacataaactatgctttgaactattgtggctattgctggttgtagaaaatcaaccatattaattccagtgttcatttttatttgaaaatatggaaaaggaatgaaagaaaagaaagaaccactcccaccatatgattgtatgttgtgatagaaaataaggtcttggtaggaattctcttcacatcaattttggtttcgtaggcaagtaacagttatgaaacaatccaagaaaaataagacgcaacatatttccttaaatcgtgggtggcagaaagattaaaataccgttgaattaatgcctattttgtcgcatattaaattaaacctattaatttcctaaaaaaaacagtgcgtgttcaagttgttggtctagatccgagtgaaaaagaatcaacctcctcatattgatgttcattttattaaaaaagatagaaaaaaagacagaaaacaaaggaccactcccacaccatatgattgtaagattgttgttgaagttttcatatggtaatgtaattaattaactatgtgatcatattcatttatataccatgcttcatgtgttttgcataggatctctactggtagctagtagaatcaacttattcatttcaccttctctataatccaataaatcatactatatctttatactaccatctcaaataatatcggtaatagaataatttttttaacaatagtagaactcatatatcaactattgagatatcacattatcgcttctatgtttatacctacgataataccaataataaaatgctaccagtagagaccaccgtagagacactcaccgtgcttaattttgaaccattatggctattgtgtgcaggaggtgatcaatggcgagcggcggcgcattatccccggtggaggagaagcccacggtggtgaagacgaccaaggcggagcagcacgaggaggaggcggcggtggcggtgaagagcgcggcggagatgatgaagaagagcagcccgtgctgcccccggtgcaactccatcaagaccaagttctgctactacaacaactacagcatggcgcagccgcgctacttctgccgcgagtgccgccgctactggacccagggcggctccctccgcaacgtccccgtcggcggcggctgccgcaagagcaagcgctcgtcggcctcgtcggcgtcggcgtcggcggcgtctcctcctgctcctgcggtgggcgccgcgccaccggtggtgccggcgctgtcgtcggcgatcagcaagctgctgcagtcggagcccatggcggcgccgtgcgcggacttccccaacgtgctcccgaccttcgtgtccaccgggttcgagctccccgccgccgccggcgaccgcctctcgctggggtcgttcggggcgttcggcaacctgtcggcggcggtggcggctcccggcggtggtggtgggtcgtcgacgaccacgtcgttcatggacatgctgaggggagttggagggcttttcgacggcgtcggcaacagccatcagatgggcggcaatggcggcggcggaggcagctactacgcgcctctcatcaccggcgccggcaatggcatgctgatgccgccgccgccgctgccgccattttctggttctctgatgcagcatgggatgcaggggctgttcgccaatcatgcgatgggaggaggtggtggtggagtgatgaacgccggcgaggacggcagcgtgatggcggggctgggaggaggccagtggccgccggcgcttggtggtgcagacgagcagcagggcggcggcgacggtggcgaagctgtgatgacgaaggacaccggcggcggcgcatcgtcgtcggcgtcgaggccggactacttctacggctggaacagcgccgccggcggcgtcgtcgctggaggcggcatcggcggcaacgccgccgctgccaccggagcaacgccatggcagggcctcatcgacagcagctcggccatgatgtaagctcaatcaaatcaaccatgccaaggttggagagagatctcatccagaagttgttgctagcttcttggaatgatttttcttcagcttcatcgatcgctttagttcgttttttatccgtggatcaaattagttcgctctttggaaaaattcgtcgaaacagttttaaattttgctagacaaatgaatgtcgtcgtcgtcatcgtcgctcgtttacctgtaattagcttggagttggggttgtttgattgacctcatggaaccatgcaaaaggttctcatgtttaaggggagttaattaaatgtacatcattggtcgtgaca</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0252400, RefSeq:Os02g0252400