Os10g0403700

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Revision as of 08:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0403700| Description = Similar to AX110P-like protein| Version = NM_001071089.1 GI:115481921 GeneID:4348576| Length = 6786 bp| Definition ...")
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Gene Name

Os10g0403700

Description

Similar to AX110P-like protein

Version

NM_001071089.1 GI:115481921 GeneID:4348576

Length

6786 bp

Definition

Oryza sativa Japonica Group Os10g0403700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:14065690..14072475

Sequence Coding Region

14065690..14066211,14069962..14070042,14070080..14070561,14070992..14071028,14072389..14072475

Expression

GEO Profiles:Os10g0403700

Genome Context

<gbrowseImage1> name=NC_008403:14065690..14072475 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:14065690..14072475 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgtccccgtcctccgccgcgtcgccgccgccgccgccgccggcggagcagcgccgcccggacccggtgcgcttcggcatcatggggtgcgcctccatcgcgcggaagctggcccgcgccatgctcctcgccccgggcgccgccgtggccgccgtcgggagccgctccgaggcgaaggcccgcgcgttcgccgaggagaccggcctgctcctccgccacgccccgcgcctgcacggctcctacgaggccctcctcgccgacccgggcgtcgacgccgtctacctcccgctccccaccagcctccacgtccgctgggccaccgccgccgccgccgcggggaagcacgtcctcctcgagaagcccaccgcgctctgcgccgccgacctcgacgccatcctcgccgcctgcgacgccgcgggcgtccagttcatggacgccaccatgtggatgcaccacccgcgcaccgccaagatgcgggagctcgtcgccgacgaggccaccaccggcgacgtcagggtgctacactactacagaatgattgccctctccccccttgatatacctccatataatttgcttccagttgatgtgatgttggagataaatagcctgttcagctttcgggcaaacgaagaattcctccaaaatgatatcagggtaaagccagaccttgatgccctgggtacgctaggcgatgctgggtggtacagcatccgtgcaattttgtgggctgttgactatgagcttcccaagactgtgatcgccctgcgcaaccctgttaggaaccaagctggcgtgctccttgcctgcggagcaacattgtactgggctgatggaaagattgccaccttcaactgttctttcctcaccaacctcaccatggacatgaccatcgttggaacaaacggtacgcttcacgtcaccgactttgtcatcccatatgaagagaagtacgcggcattcaacatggcgtccaagtcaaagtttgctgaactccacatcggatgggatccactgccgagcaagcatgtcgtctctacagacctgccacaggaagccctcatggtccaggaattctcaagggcaatcacattacaaatttccatcctcaaagctcaatgtagtgggctcgccggggggcgggcggcgatgattggtggcgggcgtggttcccgggtccgtgtcacgcggcggcaggggaattga</cdnaseq>

Protein Sequence

<aaseq>MSSPSSAASPPPPPPAEQRRPDPVRFGIMGCASIARKLARAMLL APGAAVAAVGSRSEAKARAFAEETGLLLRHAPRLHGSYEALLADPGVDAVYLPLPTSL HVRWATAAAAAGKHVLLEKPTALCAADLDAILAACDAAGVQFMDATMWMHHPRTAKMR ELVADEATTGDVRVLHYYRMIALSPLDIPPYNLLPVDVMLEINSLFSFRANEEFLQND IRVKPDLDALGTLGDAGWYSIRAILWAVDYELPKTVIALRNPVRNQAGVLLACGATLY WADGKIATFNCSFLTNLTMDMTIVGTNGTLHVTDFVIPYEEKYAAFNMASKSKFAELH IGWDPLPSKHVVSTDLPQEALMVQEFSRAITLQISILKAQCSGLAGGRAAMIGGGRGS RVRVTRRQGN</aaseq>

Gene Sequence

<dnaseqindica>1..522#4273..4353#4391..4872#5303..5339#6700..6786#atgtcgtccccgtcctccgccgcgtcgccgccgccgccgccgccggcggagcagcgccgcccggacccggtgcgcttcggcatcatggggtgcgcctccatcgcgcggaagctggcccgcgccatgctcctcgccccgggcgccgccgtggccgccgtcgggagccgctccgaggcgaaggcccgcgcgttcgccgaggagaccggcctgctcctccgccacgccccgcgcctgcacggctcctacgaggccctcctcgccgacccgggcgtcgacgccgtctacctcccgctccccaccagcctccacgtccgctgggccaccgccgccgccgccgcggggaagcacgtcctcctcgagaagcccaccgcgctctgcgccgccgacctcgacgccatcctcgccgcctgcgacgccgcgggcgtccagttcatggacgccaccatgtggatgcaccacccgcgcaccgccaagatgcgggagctcgtcgccgacgaggccaccaccggcgacgtcagggtggtgagctctcctattttaaactcaaatttgattaaaatttggaaacgcttaatcgatgtttgaatctgcactaggattgattcatgacctttaagttagatgctatgcttaagatttccatatttcttggaaaccctatttccaaattccaacaatgctggattgaaattggaaaccttgctggttgaaatatgtttgaatttttgccaaatccaagatattggctcaacatcatgacgccagggtgttggaaaataaattgaaaaaagaacagtcctgcataatccatacaaaatagaacctgaaatgaagaggtagctagttcactgttttactgaaggagcatatgtttcaaattcgcaacaaacaactctgcaatggcaccatatacactattaagatattaggattccatatacactattaggattgttacgattccatactttcccggtttccaccataccaaaggcataagagttactgcaatatcttgatacacctcccaaggataggcaagaaataattgatgtagtagtttgtaagacagatacagctgttatctgtctatcatttgcagggcccatcctaacatttttgctggaccttttcttgtcatttctgggctatgcaggctgctaatttgttgggctgaattcgcactatacataggtatccatatgcacatgtcctgtagccccaaccatgctgttcccattgcccagatgccagttttactacggtgatagcataaggaattactggattaagattagctgcagttcctactagagctctgcatgatctcatccatccatttatccaacgataggctctgatccactatatttcacctttggctaaagtaaatcgacattgttttccttgatgaacagttccttagaaaacctgagcccttcagttcacatcagacagttctaatgtgactgcttaagttgcaatcattaaagaactcacaggaaccagatccagaatgcctgagacgcacatttgtcggtagtacttggtacactcatctttgttgtgctaaggattctgtttagtctgctgcttcctacaaaaatcgtcactctcttggctaagacctcaccaatagattgacgaaacttacatgtttccatgtctagatttacctagttggccacaatgaatgaatagcgatagtttgttgcaagcaatgggaacagcaaaacaacttgatgaccattgtcttcttggaatagcaacattttgttaatagctactaggatcaccatcatgcctgagatgtacttcttggagtagaatttattctgcttctttttgtaaactccttgaacttgaaggccttgtcttgatcttcaatatatatttttgccaataaaaatatagaggttcttcacttggccaaatttcctactcgtttttcttattggaacaaaatcattcactcatttgaccatgttccctttcttctttcttctgtaatggactaatggtcttccaagttaaggtaatttcacgtattatccaactagtacttaagctgccaatatgaatagcttggccctctattgatttttcatttcccgataatttgcccagtcacatccaacgaagctgttcccaacctatttctaacagataatgctattattttcctgtatgttgttccgagaatttcctataggattaccaatactcaagctatttttccaatttgcaagattaatagtgatattaccattgccacccaaacatttcttgtcaattcctcaaaatcaagttctcctaacaccaacactgcatgaattgtaagtctgagaaattaacatgataattgataactgccagaagaattccccttcggacaggttcattaatggacgttcactcactcagcatctggcgcagtaactgtgaacataggttgttgcattgatacttgatagtaaaatttgtaatgcctcatagacttgtttaggcttgatctcctttagtctgagcttcctacaatttttatgttttatccccagagggttttatgtttaataaatttagctttaagagaaactctcttaataattactgtgcaatgttgggatatcattcagtgtctgatccattgttggcctagcggcggtcggtcacgcttaacagcggccagtccggtgctagccttctcctgggtttgtgtgttggcgctgttggagtgtgggtggtggtatactttctttgtttcctggttacgaccttccagggttgtaatcttgtaatttttttcagctctatcaatagaacttcgcaccatctagtgcgagtcgttcaaaaaaaagagagtaccgagacctagctgactttgtactaattacatcccccttattagctggaacttgtgtctctcatcactaaattacaaaagggaatttcactgtcgtgttgtaatcttccatggagccattttcacacatgaaaggaccccaggataatgaaaatgggtatcaggtagaaataaattcgtcagtttagttctatttctaattcaaggtgaaattgttatgagcatgacctccatgtagattccatgtagttatttgaattctaattctcttcttcaaagtattttatatcatcatcaattaccatatcaaaatagatgtatataggcatattccctccatatatgtatgttcttgttgtccatattgttcattaaactcttctatattgatttgttttattcatctcgagattctatgttttttttcttgtcacatgatccgttctgaatgatgctacctatgtggtaatgcctcttttgtactcatatctgtgcgtatcctttgcttattttctcaattgagccctaaactttgtcctttttaatatcaggctagaaaggtagaaacagtcaacttacaaaattgtaggtagctgctagctgggaactgagttcttcccagggaaaagtattaaaactaagaggctgaaccagcgaagggtgggattttctttttttctgtaattagctcttgacattatttctcgggagaggacagtccatgttctaaaaaaacatgaacctggtttctcctgtggaacccgtttagcacagacaatagcacaggaaaaattaaatgctagcaaacaagacaaagatcagcagaaagcaaattaaatagaaagagcacgtcaacacctctagataaatcaagcaatcagcacagataatatttcagaaatagctacagtgaatttgtgattgctagtaaaagagaaggggtataatcttgataatattcttcagtttcagtccaaatatatcatattgactttttgacactactagaaatgttgaacctcagttctgagtgtcaaaaggtataactcagctctaatctaatggattgtataactgagaagactaggcaattattgacaaattatcatttgtttattaagacttcaaaattatgtgcgtctccaaactgttgacaactttcgcacacatctggtttgtaatgtgaaagttgagataaacatagatacaattaagctatcttttccagctactaaatataaaagcattctgttgattccaaacctagattgtcatactatcatgcaccattacttaactcttggtgtatgtcagcagacccaacaatgcgtacagtcagtttgaggaacgtcaatacatatatgaacatataaaatgtttatggaatgatgtattgccgtactctgcagctacactactacagaatgattgccctctccccccttgatatacctccatataatttgcttccagttgatgtgatgttggaggttaactaaatcattgtttttccttttgctgcttcagataaatagcctgttcagctttcgggcaaacgaagaattcctccaaaatgatatcagggtaaagccagaccttgatgccctgggtacgctaggcgatgctgggtggtacagcatccgtgcaattttgtgggctgttgactatgagcttcccaagactgtgatcgccctgcgcaaccctgttaggaaccaagctggcgtgctccttgcctgcggagcaacattgtactgggctgatggaaagattgccaccttcaactgttctttcctcaccaacctcaccatggacatgaccatcgttggaacaaacggtacgcttcacgtcaccgactttgtcatcccatatgaagagaagtacgcggcattcaacatggcgtccaagtcaaagtttgctgaactccacatcggatgggatccactgccgagcaagcatgtcgtctctacagacctgccacaggaagccctcatggtccaggaattctcaaggttagtgcagaacatccgagacgcaggtggcaaacctgagggaaagtggccagccatcacccggaagactcaggttgtgatggatgcggttaaaacctccattgacaaccgatttgggccagtggatatttctagctgaaggggtaagcaagtgtgctttctgacgatctctgaagtccatgatatttctgtatcctaccagaaagaaccacctattcaaataattggaagaattgcagtcaaattcactacaatattgtagatgtatcaagcaagatgatgttataaataaatagaatttgaaacatggaacctctgtttgacccatggaaagctaaccattgggacatatatattcccatatgaaattcatctgttcctaatgaggttcatagttcaaattcttggttttctctgcatactctgtcagggcaatcacattacaaatttccatcctcaaagctcaagtaagttttcatttgacattttctgctggataacttgtacagtaatttgattggcctgagaagcatgaacctttcaaagcatatattatcttgtgatgaaggaggcacacctggccaagttggagaagacattttcaagacttcaacaatcaacatcacaacctttgtccctgctgacatttttgccagttctgaaaaatttctgaacatatgttgtcgatggcaatgaaggacacatgcatgcttcaactactgctgctgtaaggtgaccgaatgcttaaaacgaaagctgtgttttctgacggtgccgactgctgacacgttgttttcgtagtagcaagtagttgttgttgatgccggcctgtctctccagaggactgtatgatagctcagctgttacttaagtttgttcattttatataacttactatctctgttctataatgtaataacttttaacgatatatttggacttatccttatccttccagagataaagtcaaaagttgttatatgtttggggacggaggttgtttggttgatagccataagttaccacactttgccacaatttaggttagacaagtttgattatgttaagtgagtgttcggttggctcccataagtatggcatgatttttcttttgtaatgtatgtctcacatattagtgactttgaaaagtgtggtatggtttcattttgttggctagcgtgtggcttggattttgatagcctcacctttagcaagtttagctaagaaagcatgacatacctagacaattctagtatgtggaccaaacaacccctggtacttcactaaattattgtttctaaaatgaaaaaaaaacttgtattgtactctattttttagatactttattattctaagtaatatatcaaatttcatttatcaaaaatatttaatttatatttttattcgattaataatctgttttagagcagatgctcatcgtgtcatactgtcagaggttaattgcacacgttcgtcagagttctcgcaccttcgtccaaaaaaaacttaaccctatgtttgaatttggatatacacggtatctagagacatacactatgattgcgctagctagatgtacatgggattctctgagcaggataaattaagagagtgggttattatccagcgatcagttggcgttgcattggtttctgaaagaagcgatttgatgactttgcagccttgcagtaattaattaaatctgacaccattaataaatacagtactgctgtgtttagttaaagtttacgcgagcagagaccaccacgaatacgtacgtattttcagactctttctgtgagtacgtacgtacgtcggtacgtgcagtgtagtgggctcgccggggggcgggcggcgatgattggtggcgggcgtggttcccgggtccgtgtcacgcggcggcaggggaattga</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0403700, RefSeq:Os10g0403700