Os10g0405600

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Revision as of 08:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0405600| Description = Phosphofructokinase family protein| Version = NM_001071095.1 GI:115481933 GeneID:4348582| Length = 4393 bp| Definit...")
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Gene Name

Os10g0405600

Description

Phosphofructokinase family protein

Version

NM_001071095.1 GI:115481933 GeneID:4348582

Length

4393 bp

Definition

Oryza sativa Japonica Group Os10g0405600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:14206385..14210777

Sequence Coding Region

14206744..14206911,14207002..14207130,14207217..14207297,14207510..14207614,14207696..14207812
,14207942..14208082,14208245..14208317,14208413..14208516,14208602..14208697
,14208846..14208957,14209039..14209112,14209458..14209539,14209622..14209914

Expression

GEO Profiles:Os10g0405600

Genome Context

<gbrowseImage1> name=NC_008403:14206385..14210777 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:14206385..14210777 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctctaaaatcaccagtggattttgctggctcaatcacttcaggccagaaggacccgtgttgttttggtgtgcccggctgcaatccgcgatgtgttagatacaataagaaatcaagaacatgccgattggttactagagccatatccgtcgatcgcccgcagctagacttctcaaactcagactggaagaagcagttccaggaggatttcgataggcggttcagtttgcctcacttgaaagatgtaatcgacgttgaaccgaggccaacaacgttttccctcaagagcaggacccctctggagaatgttaatggttctatgcaaggatcatggaatggctatgtgaatgacgatgacagagcacttttgaaggttattaagtttgcttcaccaacatctgctggagctgattgcattgaccctgattgcagctgggtcgaacaatgggtgcaccgtgctggcccacgtaaacaaatatattttgaacctcagtatgtaaaggctggaattgtcacctgtggtggactttgccctggtctcaatgatgtcattcggcagattgtgcttacactggaaaaatatggagtgaaaaacattgttggaatacagcatggtttccgtggattttttgaggatcatttagcagaagtgccacttaataggcaagttgtccagaatatcaatcttgctggtggaagtttcttaggagtttctcgtggtggagcaaatatctcagacattgtcgacagcatacaggcccggaggcttgacatgctctttgttctaggtggaaatggaactcatgctggagctaaccttatacatgaggagtgccgcaagagaaaactgaaagtatcaattgtgggcgttccaaaaaccattgataatgacatactactgatggacaagacatttggatttgatacagcagttgaagcagcacagagagctataaactctgcatatattgaggcacattctgcatttcatggcattggattggtcaagctgatgggaagaagcagtggctttatcacaatgcatgcttccctgtctagtggccaagtagatatctgcctgatacctgaggtaccgttcactcttgatgggccaaatggagttcttcaacaccttgagcacttgatagaaaccaagggatttgctctgatttgtgtagccgaaggagcgggacaggaacatctgcaacagtcaaacgcaactgatgcatcagggaacatgatccttggtgatatcggcgtgcaccttcatcagaagatcaaggcccatttcaaggaaataggagtacattctgatgtgaagtacattgatcctacatacatggtccgtgctgtgcgtgccaatgcatccgatgccatcctatgcactgtgcttggtcagaatgctgttcatggtgcatttgcagggttcagtggcatcacaaccggcatatgcaacacgcacaacgtctacttgccaatctcagaagtcatcaagtccacaaggttcgtcgatccaaacagcaggatgtggcaccggtgtttgacatcaacagggcaaccagacttccactga</cdnaseq>

Protein Sequence

<aaseq>MALKSPVDFAGSITSGQKDPCCFGVPGCNPRCVRYNKKSRTCRL VTRAISVDRPQLDFSNSDWKKQFQEDFDRRFSLPHLKDVIDVEPRPTTFSLKSRTPLE NVNGSMQGSWNGYVNDDDRALLKVIKFASPTSAGADCIDPDCSWVEQWVHRAGPRKQI YFEPQYVKAGIVTCGGLCPGLNDVIRQIVLTLEKYGVKNIVGIQHGFRGFFEDHLAEV PLNRQVVQNINLAGGSFLGVSRGGANISDIVDSIQARRLDMLFVLGGNGTHAGANLIH EECRKRKLKVSIVGVPKTIDNDILLMDKTFGFDTAVEAAQRAINSAYIEAHSAFHGIG LVKLMGRSSGFITMHASLSSGQVDICLIPEVPFTLDGPNGVLQHLEHLIETKGFALIC VAEGAGQEHLQQSNATDASGNMILGDIGVHLHQKIKAHFKEIGVHSDVKYIDPTYMVR AVRANASDAILCTVLGQNAVHGAFAGFSGITTGICNTHNVYLPISEVIKSTRFVDPNS RMWHRCLTSTGQPDFH</aaseq>

Gene Sequence

<dnaseqindica>3867..4034#3648..3776#3481..3561#3164..3268#2966..3082#2696..2836#2461..2533#2262..2365#2081..2176#1821..1932#1666..1739#1239..1320#864..1156#ttcccttccccccacccgattcgtctcccccctccggcgcccctcgagttcttggattccctcttctttttcttcttcttcttgcgttggtacaacaatccgtcgagagctccgtggcgtggattggattaattctctctcgccgaggaagaaagaaaaaaaaaaacgagacggaggcatcgaggtggccgtctcccctccgccgctataacaacaagccgccgccgccgccgccgttgtcgccgctttgctctctccgctactccggcgaccggggagaggtgcgtttcttgatttttttttttgttggtgtggcttcgctgcgttcgtggtaggtcgtgcttaggtgattttttgtttttttcccggcggggtgggagtgattgatcctgcaatctccttttgtttttacatggtttcagggtggagaagatttttactctgaaaaaaagaatcatcttttacccccaaaaaaattcggagtatgatttgttccgcttcttgtcaatgttttggttgatgttttcacatgctaattctgcggttgttcttttgtggcttattagtcgtagacagtttgtaatagctcaagtccaagattcctggagcatatgcatatgtcatcttcccttgtaggaaaaaaggtggagcaatacattgaattgattagtttggtcacctgcctgtagtgtaggaatattcttttcttttatttttcttcttttttttctgggatacagatacagttggagacaaaagtagaagattattgggaaaaattgcagaaatgcttatgtatttgtcagtgctgatggaacctactctgcagggtagttgcatgatcggcaacatcaatctgaagaatggctctaaaatcaccagtggattttgctggctcaatcacttcaggccagaaggacccgtgttgttttggtgtgcccggctgcaatccgcgatgtgttagatacaataagaaatcaagaacatgccgattggttactagagccatatccgtcgatcgcccgcagctagacttctcaaactcagactggaagaagcagttccaggaggatttcgataggcggttcagtttgcctcacttgaaagatgtaatcgacgttgaaccgaggccaacaacgttttccctcaagagcaggtgagaaatacgtttgaattttgaaacgtctatctctctaggatttgttttatgtataacatgatttctatgcctacaacaggacccctctggagaatgttaatggttctatgcaaggatcatggaatggctatgtgaatgacgatgacagagcacttttgaaggtatgttttattgctttgacattgagcaatcagatttacctagacatggataagctcaaatagacaaatactcaataacaagtacttcattagactctggtcatgtcaagatgtgctctggattttgttttttcgttttcggaatacagtgcatgagcatggataacctgaacttagtttcaatgatttttaaatgcagaatcatatctaagccatgtggcggtaggaatttttcgttcgagtattattcctgctactctaaaggacatgttgtagaactgctcgttgtttactttcttcttgatacaataagaagttctcattgcaaattttttccttctttaggttattaagtttgcttcaccaacatctgctggagctgattgcattgaccctgattgcagctgggtcgaacaatggtgataaatattatccacaaattcaaatgttgaattgtgacagtgcttttcacttctgtaaccaaaagttatcttctccagggtgcaccgtgctggcccacgtaaacaaatatattttgaacctcagtatgtaaaggctggaattgtcacctgtggtggactttgccctggtctcaatgatgtcattcggcaggtagaactgttgaatagaacaggacaagttgaactttgagacccgtacagaaaaatagaagttgactaacccatcatatgattatatttctgagattctcttcaacaaaaccctaattgtcaacttgatcttgcttgcactcttgtagattgtgcttacactggaaaaatatggagtgaaaaacattgttggaatacagcatggtttccgtggattttttgaggatcatttagcagaagtgccagtaagagacattaaccaagtttctggaaaaataatgataatcataccaaaagtagtttaatggtctttttttccccttcactcagcttaataggcaagttgtccagaatatcaatcttgctggtggaagtttcttaggagtttctcgtggtggagcaaatatctcagacattgtcgacagcatacaggcatgaatacatcattctacaattcaaaatatatttttacgatgaactgatgcacaaaaaaacttatcgatttgatttttacataccacattcaggcccggaggcttgacatgctctttgttctaggtggaaatggaactcatgctggagctaaccttatacatgaggaggtatgttaaattccgtgttcattgtttctgaacaaaagttatcttttgttcctggattttaatagacaaaaaaaatatctgacctcagtcatatatagcatgagtggatggccatcttacatctatctgtctatttgcctctttttctttcttttgatctagtgccgcaagagaaaactgaaagtatcaattgtgggcgttccaaaaaccattgataatgacatactactgatggacaagacatttggatttgatacagcagttgaagcagcacagagagctataaactctgcatatattgaggtgattcatttcatgagccattcagaatgaacttgtctgactgaagaactatatatataatatgcacatcatagttaccagttaccaccaaaactagtttggtagcagtaacaattttttgtgtattaggcacattctgcatttcatggcattggattggtcaagctgatgggaagaagcagtggctttatcacaatgcatgcttccctgtctagtggccaagtagatatctgcctgatacctgaggtatgaactcttctgttgttatgtataacctatgtactatgccactacagttgatcaagctcatcggtaatctatgtgaaggtaccgttcactcttgatgggccaaatggagttcttcaacaccttgagcacttgatagaaaccaagggatttgctctgatttgtgtagccgaaggagcgggacaggtaaggctaattccagatagaaaacaaattgtttaaagaaagattttcagtatgaatgattctgcatgttagtaccgggtatctcttatattaggggcaaggttgtgatatggagtattagtataccacatagatcattgctgtaagctatccagtctatcatccactttatatataataattatgtaagaaatgctgcaatgtattatcaggaacatctgcaacagtcaaacgcaactgatgcatcagggaacatgatccttggtgatatcggcgtgcaccttcatcagaaggtttgtccatcgaatgaccttcaccttgatgatgtatcaaaaatcacatgccaaaccaaatctaacttaaccgtgccatgccacagatcaaggcccatttcaaggaaataggagtacattctgatgtgaagtacattgatcctacatacatggtccgtgctgtgcgtgccaatgcatccgatgccatcctatgcactgtgcttggtcagaatgctgtaaggcacctttcccttcattagctttctgccacacaagttctagcagttcatgttgtctcagcattgatttctgatggaacttcgcaggttcatggtgcatttgcagggttcagtggcatcacaaccggcatatgcaacacgcacaacgtctacttgccaatctcagaagtcatcaagtccacaaggttcgtcgatccaaacagcaggatgtggcaccggtgtttgacatcaacagggcaaccagacttccactgattcaggtattgacagtggaagctcatagcaactgaagctaaaaactataggcggttttgtgctgtatagtaagagtggtgcttgtgccgcatcactcgtttgatgttttttcgtctttcatcagaaagaaacatcatcttccattgatccttgaggtgcaagatggatacaataagcacctcattgaaaagatagcttcttttttatagattagcagtacatggtttattagagaccacatagaagtagagaagatttctaactgcaagggagatggttagctcccgttacaactgcagaaacatatgtacacattacacattcttcacagctgaaataatggagagaacattgccacc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0405600, RefSeq:Os10g0405600