Os02g0267000

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Revision as of 02:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0267000| Description = Similar to Signal peptidase I (EC 3.4.21.89) (Leader peptidase I)| Version = NM_001053044.1 GI:115445458 GeneID:43289...")
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Gene Name

Os02g0267000

Description

Similar to Signal peptidase I (EC 3.4.21.89) (Leader peptidase I)

Version

NM_001053044.1 GI:115445458 GeneID:4328965

Length

6390 bp

Definition

Oryza sativa Japonica Group Os02g0267000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9573179..9579568

Sequence Coding Region

9573311..9573772,9577122..9577190,9577282..9577350,9578236..9578322,9578927..9578994
,9579092..9579233

Expression

GEO Profiles:Os02g0267000

Genome Context

<gbrowseImage1> name=NC_008395:9573179..9579568 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:9573179..9579568 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcctccatccacttcttcccggccacctcccaggccgccgccccgtcgcgccgccccctcaccaaaccctccccaaaaccccccgccgccaccgccgcgtaccaccgcggcggagacaacgagccggtgctcttcccgcgcctcttcctcaggaggcgtgcccggcccgccgcggcgccggccgaggcgccgccggtgggccccgacggcagcagcagcggcggcgggggaggaggaggggaggggggcgggggcggaggggacgacgaggaggatgaggggacgaggaaggggctgctgccggagtggctcagcgtcacgacggacgacgccaagacggtgctggccgccatcgccatctcgctcgccttccgctccttcgtcgccgagccgcgcttcatcccctcgctctccatgttccccaccttcgacgtcggcgaccgcattgtcgccgagaaggttacatactactttagaaagccatgtataaatgacatagtaatcttcaaaagtccaccagtgctgcaggaggtcggttatactgacaatgatgttttcatcaaacgaattgttgccagggagggagatgttgttgaggttcataaaggaaaactagttgtcaatggtgaagttagaaatgaagagttcattcttgagccaccttcttatgacatgaacccagtgcaagtacctgagaactcagtttttgtaatgggagataaccgaaacaacagttatgattcacatgtgtggggccctcttccttctaagaacatattggggagatccattttccggtattggcctcctggccgaatagggagcactactactgattgcctcatccctgagacaaatccaagctcgcttattgatgtcaaactggcaaagtag</cdnaseq>

Protein Sequence

<aaseq>MSSIHFFPATSQAAAPSRRPLTKPSPKPPAATAAYHRGGDNEPV LFPRLFLRRRARPAAAPAEAPPVGPDGSSSGGGGGGGEGGGGGGDDEEDEGTRKGLLP EWLSVTTDDAKTVLAAIAISLAFRSFVAEPRFIPSLSMFPTFDVGDRIVAEKVTYYFR KPCINDIVIFKSPPVLQEVGYTDNDVFIKRIVAREGDVVEVHKGKLVVNGEVRNEEFI LEPPSYDMNPVQVPENSVFVMGDNRNNSYDSHVWGPLPSKNILGRSIFRYWPPGRIGS TTTDCLIPETNPSSLIDVKLAK</aaseq>

Gene Sequence

<dnaseqindica>133..594#3944..4012#4104..4172#5058..5144#5749..5816#5914..6055#gcttatcctcctcgtcttcccttccatcccccaacccaacccaccaccgcctcgccgcggtcgccggcgagaggcgccgcgctgcgcgcgtcgagaggatcgcctcctcctcctcctcctcctccggcagccatgtcctccatccacttcttcccggccacctcccaggccgccgccccgtcgcgccgccccctcaccaaaccctccccaaaaccccccgccgccaccgccgcgtaccaccgcggcggagacaacgagccggtgctcttcccgcgcctcttcctcaggaggcgtgcccggcccgccgcggcgccggccgaggcgccgccggtgggccccgacggcagcagcagcggcggcgggggaggaggaggggaggggggcgggggcggaggggacgacgaggaggatgaggggacgaggaaggggctgctgccggagtggctcagcgtcacgacggacgacgccaagacggtgctggccgccatcgccatctcgctcgccttccgctccttcgtcgccgagccgcgcttcatcccctcgctctccatgttccccaccttcgacgtcggcgaccgcattgtcgccgagaaggtccgtctgctcttccttgacttctttcctttttgtttttgtcaacagaggattcagattttacttaaatgtgctgattactgagttccgggtgcacacatttgcctaatgtttctgataaaatgtgtgccttttgaatttcgacttgggtaagtaatcaatacagcacaatcgtagaaatttgttcacgtacttgttacttgttggtttgcttcctggttgcgtagcatatgatgatcactgccaaattttgtttagacgataacctggtataagcattggtaaaacaaaatccccaacatactagaattccgcattgacatcagcaaataggcatatggacacatgacacatgttcacattatcatgctcacctctgcaggcaatggctgatcttttgcatattgttttgtccagccatcagtcaaacagtcatatatagcttgagttagctataaaaattatgaatgagctgttttaaatgggtttcacagcacttctaagtgtaacagggaagcaggcgtagacagtccgattgttggttaacattttaggacatattttttttttcatttttgtgttaaattataagaaatgatcatcgtctagttagatagcatgccttaatatgttctatgcctcctgttggcagtaaaaagttctgaaatgaggctatttattttgtaaaaaactgccttcacaagacttgttcataatctcaatagactttgatcatattggggatatttggagtaatatacgataacctacataagtatagaaaacaatgacaatattccacataaaaaagagagcatgacaatatgcaccctttgaattgcattaatctttctacataatccttagtccaaagtatgtgcttgttgtcattaacagaactagcacggtggcccgcgcagattgcgcggctagcatcactatattttctctcatataatagcatatatgttttctcattatattatttaaatatattaaaatgacaacataattttaaattttgcagtaactttacaaaactaataatgtgtaatattcatattgtattttatatacgtgttagttattaattatttttaatatcaaattttagttatttgtaaattatatatattcctatatggactctagacttgtcttttaatatttcttttttttttaattctgaattttctgtaaattgtatttctatatagactctatgctcttcttccaatattatttattttatttctgaatttttattatttctaattgtatttctatgtggactctaaactcatctttcaatattctttaatttttaatttcgaatttcagttacttctaaattgtattcctatattgactttaaactcttcttcccatgtttttcttaatttcgaattttagttatttgtaaattgtatttttatacggactctaaactctacttttaattttattatgtttatttcaaattttagtttgttttaaattcctatatggactctatactctacttctaatattccttaattttaattccgaatttcagttatttcctaattgtatttttatatggactctatactctacttttaatattccttaattttaattcggaatttcagttatttcctaattgtatttttatatggactctatactctacttttaatattccttatttttaattccgaattttagttatttcctaattgtatttctatatggactctagtctcctcttctaatatttcttattttttaattcctttcaactatttctaaattgtatttataaatggactctagtctcctcttctaatattccttatttttttaatttcgaatttcagctatttctaaattgtatttctatatggactctgccttttctttttctccgattaatgtgagaatttctaggccatgagagcgagtgtggaggctcctttttctattcctttaataatataatagatgtcacaattctctcaaacagttcctagtacatcttgggcacagggtttgacctatcggaacactgatttgtatcgggggtcaccgaagttctgaaatttcggaaatattgcggaaattttggacgatttttttttaaaaaaatgaattcaaatttaaaaattgtgggcgaaatttccaaaaaaagaacaaaaacagatagcaacactcgctctgtttggcagccatacaagcagcagcagctgcatcacaaatttgcggcaattcttaactactgcagctgtggcaaccaagctggaaaaataccaagctgaaaatgcacaaggaaatataccaatctcgtcctagaaccaataagcccaaccattcttccatcaacttctagaatatgagatgcacatgaacagaactagctggttgttgaagaatatactgagaacaaacaaatgtgaagaagagggataaccaagctggttgttgagcaccatcaccttcaccggcaggttctcgacgtggatcatggcgagctcctggatgttcatcaggaagctgccgtcgccatcgatgtcgaccaccgcggcaccggcggcggccggcaggccgaagcccattgcgcctagcctggcggatgagagccactgcctgggtctcctgtaggtctagtactatgtcgcccacatctggtgctgcccgacgcccggctggagcggctgcaggcgacggctaggggcgccggtggtgggctgcgtcggggcggcgaggcggcgaccggcgtcgaggcggcgcctggcgacttggcgagatggtgatttttttcgatctgggtgtggtgtggcgcaatgaggggaggcggagggggggagagaacggcgatttagggttaggggagaaaatcgcgtcaaattttttttggccgaaatatttgaccagagctcacttacaatcgggacccaccgaaacgcccgaaatttccgaaatttcggttccaaaatttccaacgccgcttcggcataatactgctttgttttatccaactaccttttctagttgtgatgattgattagtccattattaatattttaactacgatgaatcaggataccaaattcattgtggttgttgcttattttcatttgctgaattccaacctttagtgtctttataagttccaaaatttgtttaaatttgcaagatggtatgatggaccactattaaaggtcacctgcatgggtgtataacttcaccctatatattgttattcatgttgagtttgtttatatttctgtcaaaagatgtctttttatatcttactaagcaatgtattcacatcatatcataaatttaccatatgaatgcttttcaggttacatactactttagaaagccatgtataaatgacatagtaatcttcaaaagtccaccagtgctgcaggtacttgcatattagctaaaagtgtggtgttttgggaatttggatgatgtttgctgtttttcttgatatcactgtgaatgtttctgttcaggaggtcggttatactgacaatgatgttttcatcaaacgaattgttgccagggagggagatgttgttgaggttgctttcaaactgagaaacttctttttcatgtgtataactatatcttgtaatcttcacttaattagtttctttttctgtctatgaattccttcctgcagtctttgtgtgtgttaatttcaacaccatgaaattctttgaaattttttaggtagtccaaggagtgtactaaaattgggaaacgtttactccatactgtttaagcattggagaaatcattatgtctattatgtgatcacaaaatagatttgtgatctttccatcttcctgtgctcactttgtgccatgagctgcttcatggtctcttccacatggcatgatactccacgtcagctgcaccaggctcaaaggcaaggcccgctatggcaactcctcagccacatggcagttctactttggggatggtggcgtcagtcttgcaggaacggcattgatgtttgagatgctgagtgtggatgtgaatgctggaacagtctcactcccacttgcagtggctagggcggtgatgctgtcactgatgatgagtcttgatatcttgttcttgtatgttagcctacaatgagtctgaggtcttatattcttctatgttagcctcctcgctgccactttctgccctcttctcctgcattgttgttcttcagcactgttcttccagatcagttgttttgagctagaatttgcgacaggatgacatgtctcatggaactttagtacttgtgaagtataacataagcaatagaaaaatccttaccctatgaattgtttggagtgacctacttactgtgctcaagtattaatttaggttctttctttctttctttcttttgaaacactgtgacatcctcaaacaacaaaatacttaattttcttttcatcttattgcaggttcataaaggaaaactagttgtcaatggtgaagttagaaatgaagagttcattcttgagccaccttcttatgacatgaacccagtggtaagatattactgagccacccatgaatgatacatgagctcaataatgtaacaaccaaccaaatatagtttgaaccacattccccagttaaggctgatgagcaataagaggattaagaaaacacaaatggtttattagttttgattcactgacactacatatgtggatgtgtcagtggaatgaatggagacatttgaagaaacaatcttgattagatcccttactgttactgatttttaaatactttatctgcattaataatcagacgtatatcatgacgaattacatataaaaacttgcattttgcgtgtggtatacctccaagtaagctgaagacataaaatttctatagaatctattgaatagtgctcactagccacacctaggtggatatagatatggttaccactatttatagatacattattgtgtatggtttcttgtgttgtgtgctgtgtgcatattctgtacatatgcatgaacatgaagttgtcaacaacacttcatacttgatttatgtttcaatccttgtagaagaaaaatgaacatgattcttttctgggttatatttttgtgtttgttgatactatgtttttcatgacagcaagtacctgagaactcagtttttgtaatgggagataaccgaaacaacagttatgattcacatgtgtggtaatactctctgctgattttcccatgttacttactattaacttgttttgtatcttaattgaattggcctgtacaatactgctattattttcctcaggggccctcttccttctaagaacatattggggagatccattttccggtattggcctcctggccgaatagggagcactactactgattgcctcatccctgagacaaatccaagctcgcttattgatgtcaaactggcaaagtagaagttcaggcattgattattgcagtgtgaagtttgcgcttcatgtaagctcctattctttaatattccctctctcctggaaattcggaggaatatttgacagcaggccacgtagaaattagaaaggagaacacatttggttctccttgatgtcacaaagaatgctagcaactagcatgagcatagaaaccattttgtttcaaggtttctgcgactctcgctctttgttgtatattaagactgtaaggatgttgccttagtgattcgcatcaaatgattcttcttgtacatcacgttttgtagcaccacgtgtgtatcatcctcatacagtgcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0267000, RefSeq:Os02g0267000