Os02g0271000

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Revision as of 02:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0271000| Description = Similar to Subtilase| Version = NM_001053057.1 GI:115445484 GeneID:4328982| Length = 3656 bp| Definition = Oryza sa...")
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Gene Name

Os02g0271000

Description

Similar to Subtilase

Version

NM_001053057.1 GI:115445484 GeneID:4328982

Length

3656 bp

Definition

Oryza sativa Japonica Group Os02g0271000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9807408..9811063

Sequence Coding Region

9807496..9808046,9808129..9808300,9808422..9808539,9808651..9808914,9809187..9809254
,9809420..9810045,9810157..9810312,9810428..9810525,9810641..9810732
,9810840..9810911

Expression

GEO Profiles:Os02g0271000

Genome Context

<gbrowseImage1> name=NC_008395:9807408..9811063 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:9807408..9811063 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggattcgagatcagctttgctactacttgttctgctagtttccccctttttcaccaatgcatcgagcagactctacatcgtgtacatgggggagaagaagcatgatgatccgtctgttgtcacggcatcgcatcatgacacgcttacttctgttcttgggagtaaggatggcgccatgaagtctatagtgtacagttacaaacatgggttctctggatttgcagcgatgctcaccgaatcccaagctgaggaacttgcaagattacctgaagtcatcagcgtgaagcctaacacttaccatcaagcacaaacgactcgaagctgggattttctcggccttaactacaacgaacaatcaggtcttctaaagaaagcaaagaacggtgaagatgtcattgtcggtgtcatcgattcaggtatatggcccgaatcacgaagcttcgatgacaatggctacagtcccgtgccagcacgatggaagggcaagtgccagaccggcgcggcgttcaacgccaccacgggttgcaacaggaagatcatcggcgtacgatggtactcgggcggcattcccgacgagaacctgaagggcgagtacatgtcggcgagggacctcggcggccacggcacgcacgtcgcctcgacgatcgtcggcgggcaggtacggaacgtgagccacagacagggcggcgccctggctgccggcacggcgcgcggtggggcgccgcgcgcgcgggtcgcggtctacaaggtgtgctggggcctgcgcgcccagtgtggcggagccgcgatcctcgccgccatcgacgacgccatgaacgacggcgtggatgtgctgtccctgtcgataggaggcgcgggcgagcattacgagacgctccacgccgtggcgagagggatccccgtcgtgttcggtggcgggaacgacggccccacgccgcagatcgtgaggaacaccgtgccgtgggtcatcacggtggccgcctccacgatcgacagggccttccccacggtgatatcgctcgggaacaacaagaaatttgtggggcaatctctttactacaatgcaacagcaagcagcaccaaatttcaaatgcttgttgatggatcaagctgcgacacgcagacgttggcgtcgatcaacatcaccagcaaggtcgtgctgtgctcgccgccgtcgctgatgccacctcggctgtcgctgggcgacatcatcggccgtgtcatcaaggcaggcgccaatggcctcatcttcgtgcagtactccgtcagcaacgcccttgattttctgaatgcctgcagccgcgccagcgtgccatgtgtactggtggactacgagatcacacgcaggatcgagtcatacatgaccagcacaagcacgcccatggtgaaggtgtcgtcggccatgacggtggtcgggagtggggtgctctcaccaaggatcgctgcattctcgtcaagaggaccgagctccttgtttcccggaatactgaagcctgatattgctgcgccgggagtcagtatcctcgcagctgtgggtgattcgtacgagctcaagtctgggacgtccatggcgtgcccgcatgtatcagcagtggtggcgttgctcaagatggttcacccggactggtcgcctgccatgatcaagtccgccatcgtcactactgcttcggtgacagatcgttttggcatgccaatccaagctgaggcagtgccaaggaaagtggctgacccattcgacttcggtggtggccacatcgaaccgaataaagccattgaccctggcctagtatatgacattgatccaagccactacactaagttcttcaactgcacccttcctgaagctgaggatgactgcgagtcctacatggagcaaatctatcagctcaacctcccgtcaattgcagtgccaaacctaaaggactctgtcacggtttggcggactgtcaccaatgttggagaagcagaagcaacttaccatgcagcgcttgaggcaccggttggtatgactatgtcagtggaaccttcggtgatcacattcactaggggtggtagtagaagtgtaacatttaaggtgacattcacaacaacacagagagtacaaggtggctacacgtttgggagtttgacatggctagatggtaacacacactctgtgagaattccgattgcagttcgcaccataatccaggactttgttgctgatacttcataa</cdnaseq>

Protein Sequence

<aaseq>MDSRSALLLLVLLVSPFFTNASSRLYIVYMGEKKHDDPSVVTAS HHDTLTSVLGSKDGAMKSIVYSYKHGFSGFAAMLTESQAEELARLPEVISVKPNTYHQ AQTTRSWDFLGLNYNEQSGLLKKAKNGEDVIVGVIDSGIWPESRSFDDNGYSPVPARW KGKCQTGAAFNATTGCNRKIIGVRWYSGGIPDENLKGEYMSARDLGGHGTHVASTIVG GQVRNVSHRQGGALAAGTARGGAPRARVAVYKVCWGLRAQCGGAAILAAIDDAMNDGV DVLSLSIGGAGEHYETLHAVARGIPVVFGGGNDGPTPQIVRNTVPWVITVAASTIDRA FPTVISLGNNKKFVGQSLYYNATASSTKFQMLVDGSSCDTQTLASINITSKVVLCSPP SLMPPRLSLGDIIGRVIKAGANGLIFVQYSVSNALDFLNACSRASVPCVLVDYEITRR IESYMTSTSTPMVKVSSAMTVVGSGVLSPRIAAFSSRGPSSLFPGILKPDIAAPGVSI LAAVGDSYELKSGTSMACPHVSAVVALLKMVHPDWSPAMIKSAIVTTASVTDRFGMPI QAEAVPRKVADPFDFGGGHIEPNKAIDPGLVYDIDPSHYTKFFNCTLPEAEDDCESYM EQIYQLNLPSIAVPNLKDSVTVWRTVTNVGEAEATYHAALEAPVGMTMSVEPSVITFT RGGSRSVTFKVTFTTTQRVQGGYTFGSLTWLDGNTHSVRIPIAVRTIIQDFVADTS</aaseq>

Gene Sequence

<dnaseqindica>3018..3568#2764..2935#2525..2642#2150..2413#1810..1877#1019..1644#752..907#539..636#332..423#153..224#ggatttagtctttttgcaaacatcagaaggatgtttctttaaaactattcttgcacccgaatggttgttggcggccgggctgctatttatacatgcatactagctagatcaccgaacacaaaaccacaagaacaaacttcttgaaattcaacatggattcgagatcagctttgctactacttgttctgctagtttccccctttttcaccaatgcatcgagcagagtaagatgcttccttctttcaggaaaaatgtaatttaatttgcctagatttttcctcaggaaagttactgatactgattcatgaaaccttttacatcgaaatttcagctctacatcgtgtacatgggggagaagaagcatgatgatccgtctgttgtcacggcatcgcatcatgacacgcttacttctgttcttgggaggtacaaggagttcaagtcctaacttcttataaattttaccgagcacggcaagcgatagaactggttgctcatgtttaattttgtggtttttttgtcaatatatgcaacataacagtaaggatggcgccatgaagtctatagtgtacagttacaaacatgggttctctggatttgcagcgatgctcaccgaatcccaagctgaggaacttgcaagttagtaatcatcaaagctacaaattataatattggcactagcatgttgtgtcagtgctactatttgcttgcatgattattaattaacaaacttaattatgaattcctggtgcaggattacctgaagtcatcagcgtgaagcctaacacttaccatcaagcacaaacgactcgaagctgggattttctcggccttaactacaacgaacaatcaggtcttctaaagaaagcaaagaacggtgaagatgtcattgtcggtgtcatcgattcaggtatataaaactacagtacaatacgctatatatatatatattctaaaccaaaatcacttgcattaatataagtagaattccagtagttaaagctttgacgaaacgtaacaggtatatggcccgaatcacgaagcttcgatgacaatggctacagtcccgtgccagcacgatggaagggcaagtgccagaccggcgcggcgttcaacgccaccacgggttgcaacaggaagatcatcggcgtacgatggtactcgggcggcattcccgacgagaacctgaagggcgagtacatgtcggcgagggacctcggcggccacggcacgcacgtcgcctcgacgatcgtcggcgggcaggtacggaacgtgagccacagacagggcggcgccctggctgccggcacggcgcgcggtggggcgccgcgcgcgcgggtcgcggtctacaaggtgtgctggggcctgcgcgcccagtgtggcggagccgcgatcctcgccgccatcgacgacgccatgaacgacggcgtggatgtgctgtccctgtcgataggaggcgcgggcgagcattacgagacgctccacgccgtggcgagagggatccccgtcgtgttcggtggcgggaacgacggccccacgccgcagatcgtgaggaacaccgtgccgtgggtcatcacggtggccgcctccacgatcgacagggccttccccacggtgatatcgctcgggaacaacaagaaatttgtggtaattaagtaaccatgctatttcgtcaataacttgcaagttatatggactatgaattgcatgacgattgctatatggactatgaatgttttactgcacagctacactgatgtactcctatagcttgatgtgggttatttaacctttgtatatatttgcttgcaggggcaatctctttactacaatgcaacagcaagcagcaccaaatttcaaatgcttgttgatggatcaaggtaacaaaaccaatagtgatcatgttcaagtttgttaaaatcatgatcctgaatcggaatcgaatacataaaaatcgtaaattctacctgtataaaatcatagaatcatacctcttaattaggatggtaaagtgcgcaaaatggtatggcagaatcgagatttaatttaacaaccttgatcatgctaagctagtatcattagtcatcacatttgatagatcgatcactctgctttctttagatcctgattatgaatggattgccgtgtgcagctgcgacacgcagacgttggcgtcgatcaacatcaccagcaaggtcgtgctgtgctcgccgccgtcgctgatgccacctcggctgtcgctgggcgacatcatcggccgtgtcatcaaggcaggcgccaatggcctcatcttcgtgcagtactccgtcagcaacgcccttgattttctgaatgcctgcagccgcgccagcgtgccatgtgtactggtggactacgagatcacacgcaggatcgagtcatacatgaccagcacaaggtgagctcgaactcttgataccatcccattaacatctactctccaatacgcaaaaccagcttgagtactgtacatgaatgatcttttgatgtttcttctctcatttttcagcacgcccatggtgaaggtgtcgtcggccatgacggtggtcgggagtggggtgctctcaccaaggatcgctgcattctcgtcaagaggaccgagctccttgtttcccggaatactgaaggtgacatgttgatctttgatgttctacaaacaatgaaaataccttatattactgtgtagttgtgacgatggcgtcaggttttttgaacgtctcaaaactaacctgtttgtcggttcaacagcctgatattgctgcgccgggagtcagtatcctcgcagctgtgggtgattcgtacgagctcaagtctgggacgtccatggcgtgcccgcatgtatcagcagtggtggcgttgctcaagatggttcacccggactggtcgcctgccatgatcaagtccgccatcgtcactactggtacttagattaatctgtttccaataattcgttgcttttagcttagttaggactaaccagtatacatctctcttgattgcagcttcggtgacagatcgttttggcatgccaatccaagctgaggcagtgccaaggaaagtggctgacccattcgacttcggtggtggccacatcgaaccgaataaagccattgaccctggcctagtatatgacattgatccaagccactacactaagttcttcaactgcacccttcctgaagctgaggatgactgcgagtcctacatggagcaaatctatcagctcaacctcccgtcaattgcagtgccaaacctaaaggactctgtcacggtttggcggactgtcaccaatgttggagaagcagaagcaacttaccatgcagcgcttgaggcaccggttggtatgactatgtcagtggaaccttcggtgatcacattcactaggggtggtagtagaagtgtaacatttaaggtgacattcacaacaacacagagagtacaaggtggctacacgtttgggagtttgacatggctagatggtaacacacactctgtgagaattccgattgcagttcgcaccataatccaggactttgttgctgatacttcataaacttttagctagagatagtaaatatcttcatgcaaagttgggttgtacatttttttacagaagtcaatgtgatccatgtcaatctggt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0271000, RefSeq:Os02g0271000