Os02g0271900

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Revision as of 02:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0271900| Description = Myb, DNA-binding domain containing protein| Version = NM_001053059.1 GI:115445488 GeneID:4328985| Length = 4153 bp| ...")
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Gene Name

Os02g0271900

Description

Myb, DNA-binding domain containing protein

Version

NM_001053059.1 GI:115445488 GeneID:4328985

Length

4153 bp

Definition

Oryza sativa Japonica Group Os02g0271900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9877229..9881381

Sequence Coding Region

9877298..9877363,9877802..9877853,9878615..9878704,9878814..9878919,9879648..9879776
,9879930..9881130

Expression

GEO Profiles:Os02g0271900

Genome Context

<gbrowseImage1> name=NC_008395:9877229..9881381 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:9877229..9881381 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgagcagagcagtggagggggaaggggagggggaggaggagggggaggggaagggtaacctggctaatgcaccggaagacagtcacaagcattgccaaggagaagaattagaagctggccagtcttgcaagataaattatcaagacatcatggacaagtgcggtattgaaatatctgaaaaaagaaggcggcgatggtcaacaaaggaggatgagtcacttattcaaatgattaacatatatgggcataacaactgggaaactgttgcacgcgctatacctggtcgaaatgcacaacaatgcagagtaaggtggaaattcaatctagaccctgcaatcagcaaacaggcgtggtcacgagaggaggagctaagattgattcatgtccaacaaatttttggaaataagtggtgtagaatggctgaacatttcacagggaggacaagtgctgcaatcaaagaacactggagaggtcctatgaaaagaaaattaaattcgtatttagcttcaggattgctcaaaaaatctcctggtctgcctgaaaatctatcagtttcgcagagtagtgactcaaatattcttcagcagtgtgatgtttcatctgatgagaataaactgttatcagatttacgaccaagcctaaaatctaaagaaggggtgagctcaaaatgtgatggttcatcttctgataatcaactgttatcagatttacgagcaagcctaaaatctaaaggggcaagctcaaagtgtgatggttcatctggtgataatcaactgttatcagatttacgagcaagcctaaaatctaaaggggcaagctcaaagtgtgatggttcatctggtgataatcaactgttatcagatttacgagcaagcttaaaatctaaaggggcaagctcaaaatgtgatggttcatctgatgagaataaactattatcagatttacgagcatgcttaaaatctaaacaaggggcaagctcaaaatgtgatggttcatctggtgagaatcagttgttatcagatttacaagcaagtttaatgtctaaacaaagaacaagctcaaaatataaacaaggggcaagctccaaatataaacaaggggcaagctccaaatctaaacaagggacaagctcaaagtctaaacaagggttcatagacctatgtgaaaatactgatacatcagaaggagaaagttctgagttgatatgtacagaaagaccagatcctgattcaggtgaagcttctcagaggataagggatagattgaattggcgtaaaagagcaaggaagaagctggttttcctgtcaagcccggtggagctcaaggtgtctgctgtggcagaatctgaaaggcacttacaggaaagtaaagaaatgagtccagaagttaacatcgtttctccaccagctgtactccaaggtttttcaccagaagttccatcagtatgtgaaaagattgtcgaaccaccactggctgatttcaaccaagctaagaatgtttgttctttggagacctcctcagacccatgcacactggagcaacatctggcgaatgtctcagatcttctagacatgtcatacatcgatggcttgatgatcattcctccttcaggttgcccatacgatggtgatttcatatga</cdnaseq>

Protein Sequence

<aaseq>MASRAVEGEGEGEEEGEGKGNLANAPEDSHKHCQGEELEAGQSC KINYQDIMDKCGIEISEKRRRRWSTKEDESLIQMINIYGHNNWETVARAIPGRNAQQC RVRWKFNLDPAISKQAWSREEELRLIHVQQIFGNKWCRMAEHFTGRTSAAIKEHWRGP MKRKLNSYLASGLLKKSPGLPENLSVSQSSDSNILQQCDVSSDENKLLSDLRPSLKSK EGVSSKCDGSSSDNQLLSDLRASLKSKGASSKCDGSSGDNQLLSDLRASLKSKGASSK CDGSSGDNQLLSDLRASLKSKGASSKCDGSSDENKLLSDLRACLKSKQGASSKCDGSS GENQLLSDLQASLMSKQRTSSKYKQGASSKYKQGASSKSKQGTSSKSKQGFIDLCENT DTSEGESSELICTERPDPDSGEASQRIRDRLNWRKRARKKLVFLSSPVELKVSAVAES ERHLQESKEMSPEVNIVSPPAVLQGFSPEVPSVCEKIVEPPLADFNQAKNVCSLETSS DPCTLEQHLANVSDLLDMSYIDGLMIIPPSGCPYDGDFI</aaseq>

Gene Sequence

<dnaseqindica>70..135#574..625#1387..1476#1586..1691#2420..2548#2702..3902#gtaaacgaaaatctcccgtctcgtctcctccgctccttgcgcttgcgccaagacgagtcgcggcagccgatggcgagcagagcagtggagggggaaggggagggggaggaggagggggaggggaagggtaacctggtgagcatccacatcctctttcttactcatctctctcactctcccaccgggagtacttatatctggattcttgaatttgcttgcgttaaccctagcttcccttctagatctggaagaagctcttctcctccttaatttcagagcattaacctctcttagtacaagtagtaacagtttgtttgttcccccaataatttgggggtttaactgaccccccctgactcgagcgaggttgattgggttgcggaggatgtggtaatgatgtgcctctgatgctaccacacagattactctttaagaatttgagtttcatatatgaagcaaattagcgaaacctaaaaagcatccatgtttgtgataaaacaagcaactagtaaaatgggtgtgctacctcgagttgttatcacagagtatttgactagttaactatgtgttcaggctaatgcaccggaagacagtcacaagcattgccaaggagaagaattagaaggtatttactctttgctaattgcatgttcatttaagaatatgggaagttcggacctgcattttcccatggagattttcattcatgtttcttggcgtctggattgtaagaagtggcaagttttttcagcagatagccttctttttggacaatacaagtttaaacttcagaaagcattttccttcgttatcccatacagcaaagagaaaaaaaacaacttcctgatatcgctttggtcacagcagcttgattaacaactgatgtgtaaacactctgcagctttgtagatgttattacatgtatacagaaggaccctttcctactattatccttcaaaagtaaatggaagtttgggactttgggtagtacattttctgtttgatagtatgaaactgattaccattcattgatttgccctgatctttttttgttcccgccaattgaaagttaatgggagtaggacattagttatatctctaattcaatcaggagtgctttctcatctatgtacaagtagctagttgaattaaatgtttagtacatgatagtcaattgttgattaaccttgcatccatggattgcataccgagttttaacctctcttcataaaggtcaataaaaattgccacagacattactcaagttttccattacttgtttcattgtctcatcatatttatgaaccctatttactaccattagtattcctatgatcctatctgttcattttagtccatgatgcttattatgaatttgtcaagcagctggccagtcttgcaagataaattatcaagacatcatggacaagtgcggtattgaaatatctgaaaaaagaaggcggcgatggtcaacaaaggaaagttgtttagatttctactttattattttgcttcatgtaattgttgggtttatttatttgttcatcgttatgtccactaacaacatgaaatcaactctgaatccaggaggatgagtcacttattcaaatgattaacatatatgggcataacaactgggaaactgttgcacgcgctatacctggtcgaaatgcacaacaatgcagagtaaggtaattaagtgaaactaaattgtttgattgagaccttttatattttctagccatgaccttttatacttgagttaacagcttggaataatctccacattaaatactgtcttggttatttatgcttaagctttcattgccaccatccacaatggcattttcttattctcacccatttcattgtcaacctagtctgttctgctcataaatatctcgtagcctacatgtcttgattcataagcatgcttgtctacttctaatttgtcttagaaacataaaatccatttcaacaaatgaaactgcatacttgtgttagaaaatatgcttgacatcaaatctctttatggtgcaaattttgtgatagataattagaaacaacaaaatggacatgcatcttgtgtcgatatcctttaagctaaaaaaaattgattccctagttgtggcaataaatggaataggttttttgatgccttctgtgttatttccaacacccatgttacagctgatcttttgtgaacaagaatagaaatatttgttgctactaaaagcatgtcctgaaactttcttactgtacatttctttgctctctgttatcatatatcgactaaaagcctttatggctttgagtagtgactaatgagaattcctatagtacatggtcaatatgcattcagatttcgtgaataatatctgtttattaactaagtatggatggacgtaatggaaatcaggtggaaattcaatctagaccctgcaatcagcaaacaggcgtggtcacgagaggaggagctaagattgattcatgtccaacaaatttttggaaataagtggtgtagaatggctgaacatttcacagggaggtaagatctcaaatatttaaacagatgaaaaatcaggatctcccctgtcctctaattttccctgcactttacctttgtttactttattcagcatgcatctaaccacttcaaaaggctttctgaactaaaattgttaaagtcgcgtacaagcaggacaagtgctgcaatcaaagaacactggagaggtcctatgaaaagaaaattaaattcgtatttagcttcaggattgctcaaaaaatctcctggtctgcctgaaaatctatcagtttcgcagagtagtgactcaaatattcttcagcagtgtgatgtttcatctgatgagaataaactgttatcagatttacgaccaagcctaaaatctaaagaaggggtgagctcaaaatgtgatggttcatcttctgataatcaactgttatcagatttacgagcaagcctaaaatctaaaggggcaagctcaaagtgtgatggttcatctggtgataatcaactgttatcagatttacgagcaagcctaaaatctaaaggggcaagctcaaagtgtgatggttcatctggtgataatcaactgttatcagatttacgagcaagcttaaaatctaaaggggcaagctcaaaatgtgatggttcatctgatgagaataaactattatcagatttacgagcatgcttaaaatctaaacaaggggcaagctcaaaatgtgatggttcatctggtgagaatcagttgttatcagatttacaagcaagtttaatgtctaaacaaagaacaagctcaaaatataaacaaggggcaagctccaaatataaacaaggggcaagctccaaatctaaacaagggacaagctcaaagtctaaacaagggttcatagacctatgtgaaaatactgatacatcagaaggagaaagttctgagttgatatgtacagaaagaccagatcctgattcaggtgaagcttctcagaggataagggatagattgaattggcgtaaaagagcaaggaagaagctggttttcctgtcaagcccggtggagctcaaggtgtctgctgtggcagaatctgaaaggcacttacaggaaagtaaagaaatgagtccagaagttaacatcgtttctccaccagctgtactccaaggtttttcaccagaagttccatcagtatgtgaaaagattgtcgaaccaccactggctgatttcaaccaagctaagaatgtttgttctttggagacctcctcagacccatgcacactggagcaacatctggcgaatgtctcagatcttctagacatgtcatacatcgatggcttgatgatcattcctccttcaggttgcccatacgatggtgatttcatatgagacatgaaaggggcacagacaagtagaccgcgctggtattgcactagcaatccattgtaaaaaaaaacaagaaaaccgctatgctgctgtgcatcttttgatgaacttacatagttcctgtctaattatctttgcattagatcaagaacctatctcgaaaagagctagcaatgttgttctgttagcaatgttgtcctgtgctgcatcttttgaccctccataggtacaatatatgagcatgtggtattgcg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0271900, RefSeq:Os02g0271900