Os02g0273700
| Gene Name |
Os02g0273700 |
|---|---|
| Description |
VHS domain containing protein |
| Version |
NM_001053067.1 GI:115445504 GeneID:4328993 |
| Length |
5317 bp |
| Definition |
Oryza sativa Japonica Group Os02g0273700, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:10001733..10007049 |
| Sequence Coding Region |
10002057..10002157,10002825..10002903,10003557..10003655,10003748..10003861,10004125..10004276 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:10001733..10007049 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:10001733..10007049 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgccgtccgtgctggtcgaccgcgcgacgaacgacatgctcatcggcccggactgggccatgaacctggagatctgcgacaccctcaatcgagacccagggcaagcaaaagatgtcgtgaagtctatcaagaaacgaattgcacacaggaatgcgaaggtccagcttcttgctctcacgttactggagacgatgatcaaaaactgtggggacattgtccatatgcaagttgctgagaaagacatacttcatgaaatggtgaaaatagtcaagaaaaggcctgattttcatgtgaaagagaagatcctcactctgatagacacttggcaagaagtttttggcggggtacgtgcaagatatccacaatactacgcagcatatcaggagctcttgcgtgctggggccgtatttcctcaaagatcaaatggttctgttccaatatttactcctccacagactcaacctctgcaaaactatcctgcatctttacgcagtgctcagcaagagccacctggatcatcagtgccagatttgccttcattgagcctagcagaaattcagaatgcacgaggcatcatggatgttctttccgagatgttgaatgctttggatcctagtaacagagaggggcttaggcaagaggtcattgttgacctggtggatcaatgccgttcatacaagcagagagtggtagagctagtaaacactacctcgaatgaggagttgctcagccagggcctttctttgaatgatgatttgcagagagttctagcaaaacatgatgctattgctgcaggcgttgcagttaggttggagaaaacaaaatctctccaaaccaaaattgatagttctccacccgcaaatcctgggacttcaaaagcaccagttcaaagttcttcagggactgcaagtgccagcaaccaatctaccttagcacttcctgctccagcatcatccagtagtccaaaagctcctgcagcaccagtaccggttatcgaccttcttagtggagatgattacatcaaacctgaacctgcaaactcccttgcacttgttcctgtcacagaatattcagcagctgatcagaatgtgctagctcttgcagacatgtttgagcaaaataatgccaacagaagcaacaataaccttactaactcttttaatacatcggcaccaaattcaaatttccctgcatcacaagcatatcctgctccagtgcaacctgctctgcctcagcatcctgttgcttattcaaatggggtttcatccaatgccatcgtaccttactatgatgatcaaaatggaggccttccaccaccaccatgggagattcagcaatccatggacaacccaccccaacccacccaacttggccagatgccactgcaaccagggcaaccagtagggatgcacccccaatcaccacattctggtcagtttggccaaggatcattcatgtcaccacaacaaatggcaaatggtcagctaggaggaacacagccgcgacaatcaccacaaccgcagtccgcaccgaatctccaatacggagggatgatgatgtaccccaattcgatgcaagtcaatcagggagctggaatgtactcccaaccgatgtttgggggacagttctatggcatgagccatcatcatcagatgtatgctgttcagatggctggctatggatttggccagcaacctggagcttactacatcccgaatgcggcgtatgcttatgttagcgcgaatgagcttacccagaggatgaatgcggtttcggttcaggaaggtaattcacatggtggagcaatggcatccaggcctgaagattcactctttggtgatcttgtcagcattgccaagatgaaacagaacaaacctgcagctggcaaggttggtggcttgtaa</cdnaseq> |
| Protein Sequence |
<aaseq>MPSVLVDRATNDMLIGPDWAMNLEICDTLNRDPGQAKDVVKSIK KRIAHRNAKVQLLALTLLETMIKNCGDIVHMQVAEKDILHEMVKIVKKRPDFHVKEKI LTLIDTWQEVFGGVRARYPQYYAAYQELLRAGAVFPQRSNGSVPIFTPPQTQPLQNYP ASLRSAQQEPPGSSVPDLPSLSLAEIQNARGIMDVLSEMLNALDPSNREGLRQEVIVD LVDQCRSYKQRVVELVNTTSNEELLSQGLSLNDDLQRVLAKHDAIAAGVAVRLEKTKS LQTKIDSSPPANPGTSKAPVQSSSGTASASNQSTLALPAPASSSSPKAPAAPVPVIDL LSGDDYIKPEPANSLALVPVTEYSAADQNVLALADMFEQNNANRSNNNLTNSFNTSAP NSNFPASQAYPAPVQPALPQHPVAYSNGVSSNAIVPYYDDQNGGLPPPPWEIQQSMDN PPQPTQLGQMPLQPGQPVGMHPQSPHSGQFGQGSFMSPQQMANGQLGGTQPRQSPQPQ SAPNLQYGGMMMYPNSMQVNQGAGMYSQPMFGGQFYGMSHHHQMYAVQMAGYGFGQQP GAYYIPNAAYAYVSANELTQRMNAVSVQEGNSHGGAMASRPEDSLFGDLVSIAKMKQN KPAAGKVGGL</aaseq> |
| Gene Sequence |
<dnaseqindica>325..425#1093..1171#1825..1923#2016..2129#2393..2544#2671..2752#2864..2949#3087..3266#3488..3885#4360..4973#agacgaacagcgccacggaattcatcgaaaaaaaaattatcgtgctcgccgaaagccggccgctttgagaccatccaagaaccgcgaatccttcctcccttcgacgaccttaatttcctctgccatttgagcccgccaaaggtcgccgtttcttggctctctctctttttttttttctctaggagagattttccattttttgtggccaagaaaagggttcgattttttttgggggttttctcgtgttcttgggttcgcaggcggctccggtttcggattttttggtaggagagttggttggtttccggcgagggggggagcaggatgccgtccgtgctggtcgaccgcgcgacgaacgacatgctcatcggcccggactgggccatgaacctggagatctgcgacaccctcaatcgagacccagggtgaggaaaatagaaagattattcgttctttttctgtattttgttcatgcggttttctttctttactgttgtattggttgagaggcgtcgcattcgttagcggattttgttgattttggtgagggttccaccttttgttttctccgtcttgagcgaattctgttctttcttattggcggtttggctaattttcttcatgtttgttttggtattgagacaaaatatttcgtaattgaattcagtgacttttgattgattcgtgtgagttttcgatcgaaaagtacgtattctgtttcattgtggattatcctgtttgggttgggaatctatgtgttcagatgatttctatgtgaaagccgaccttgagtccttgacagttgagaaatgttggttttaaatttaaacagcaacgtcctaattatacatcagttacaactagggcatcgaagtttgatcttgaaaagatctctttttttctagttctggagttagtttcatgtaaaaataggatcgaattaaagttttcatgtgactgtaattctgaatttcgagcttttcctataacatgcaaacttgatcaacattttggtcttgcggccagttctgtgtgaagttctacgaaaatttcagtctaagaagttctcaaacttcactgctatattcataggcaagcaaaagatgtcgtgaagtctatcaagaaacgaattgcacacaggaatgcgaaggtccagcttcttgctctcacggtgagtataatttgaaatgtttattttttgtgtattgaatctttttttggaactatttttgtgtattgatctaatacatcaactgttagttatgtaccctgtacacattttatttagcaatgcttgcgtatgggtactgcatgtaattgagtaatttacaacctgctaactgtgtgaggctgtgtgcctgtgtgtattctaacttgtaactgtcagctcctgcccgaagagatttccatgtaagaatgtattatgagatactggtaggaatattcttaggtggatgccggagacttctttcagtgaccgcaagattccaaaatcaggagtgaatgatgagaaaatagttcgcattggttgataagtagagaaatgcagcaattgtgctctgatgtagtgaggcatcaggaaaaggcctggttaggatttgttttttgtcttgtaatttcttgagacttctgatgcatgcaatgacttcttattgtcatgtcatactttttggtattcaagattaaacaggaaagacaaaacagaaattctctagtgttctgaatttgaaatgtcctgttcctcaccatgcttgaaaagttgaaacggaaagccacatctaagtaatcctttactgaactgcaacctttctctgcttgattcagttactggagacgatgatcaaaaactgtggggacattgtccatatgcaagttgctgagaaagacatacttcatgaaatggtgaaaatagtcaagaaaagggtatgtatataagtttaaaccttaaaagttaaaattgtctggttagttgtaaactctttaaattttaacgccttattcttttgagcttttagcctgattttcatgtgaaagagaagatcctcactctgatagacacttggcaagaagtttttggcggggtacgtgcaagatatccacaatactacgcagcatatcaggagctcttggtattgttccacttatatcaaatatactgatattctaattatctttgattcttctttcatgctattttttctccccaaagggtataactccaataaggtaataagagaattattttcatttttttaagataacagcatcgtaacacaattgttaagcatgagagtgtggtcatgctatttccaaataatattatagctagtttaatatcaaaccatcgtgaactaattcagtgacattcctggaaaccttgttcacatggcagcgtgctggggccgtatttcctcaaagatcaaatggttctgttccaatatttactcctccacagactcaacctctgcaaaactatcctgcatctttacgcagtgctcagcaagagccacctggatcatcagtgccagatttgccttcattgaggtattgcagtttttgaaattttcttattacaatggatgtgtatactactgaactttagcatttcaaaaaagaattgaaacatatgtttccatacaaatttggtaatgatcatttttatttcaccagcctagcagaaattcagaatgcacgaggcatcatggatgttctttccgagatgttgaatgctttggatcctagtaacagagaggtatttatattgtatccggagttatttaaatccttgtaaaattactgatttatatcaaaatatgttattaggattctccctatgtttcttgaactgacattggatatgcaggggcttaggcaagaggtcattgttgacctggtggatcaatgccgttcatacaagcagagagtggtagagctagtaaacactacctcgtaagttttttggatctctcttaccattatttttaaaatatcagatttagctgatggtggtaacttttatcatatttaagactgataaatcgtgtgatgctggaggggttcttatttcttatacggaattttgacaggaatgaggagttgctcagccagggcctttctttgaatgatgatttgcagagagttctagcaaaacatgatgctattgctgcaggcgttgcagttaggttggagaaaacaaaatctctccaaaccaaaattgatagttctccacccgcaaatcctgggacttcaaaagcaccagttcaaaggttttacagattttgacaatcatttctttatacaaatcattccaacatattctactagaaatatgatatgaattcttgaaggttccaataaaatgtgggattattttgatgatatatttctgagtagttctaccaacagtaaaccacctgggattaaaattttctttccatgatagaagttcatgttatcctgacatttttttgtcttccattatattcagttcttcagggactgcaagtgccagcaaccaatctaccttagcacttcctgctccagcatcatccagtagtccaaaagctcctgcagcaccagtaccggttatcgaccttcttagtggagatgattacatcaaacctgaacctgcaaactcccttgcacttgttcctgtcacagaatattcagcagctgatcagaatgtgctagctcttgcagacatgtttgagcaaaataatgccaacagaagcaacaataaccttactaactcttttaatacatcggcaccaaattcaaatttccctgcatcacaagcatatcctgctccagtgcaacctgctctgcctcagcatcctgttgcttattcaaatggggtttcatccaatgccatcgtaccttactatggtaatacattactctcccaggcctgctgatatgatatcttgtgtgtatgtaattgatttgtttttcttgtgggggtgcacgcgagcgcgagatggggaggggatatgatttaaaatgcattggtaatatattttattcttttagataaaagcataagacaacacaaatctttcacattaaacaagaataaatggttattatttcctgtgaaacttatgaatatcctgttacatgttactgtcttcctatgggctagattgcttgcagtccttattgtgcagttgtagtaccaactctccctatgggctagattgcttgcagtccttattgtgcagttgtagtaccaactgcacctgatctcaatttgttatcatgtggtgctagtgcaactgcttaagttgcagttacactagcaactgcaccggatcccaatcccaatccgggcatttcacaatctcttgttgactggtgcagatgatcaaaatggaggccttccaccaccaccatgggagattcagcaatccatggacaacccaccccaacccacccaacttggccagatgccactgcaaccagggcaaccagtagggatgcacccccaatcaccacattctggtcagtttggccaaggatcattcatgtcaccacaacaaatggcaaatggtcagctaggaggaacacagccgcgacaatcaccacaaccgcagtccgcaccgaatctccaatacggagggatgatgatgtaccccaattcgatgcaagtcaatcagggagctggaatgtactcccaaccgatgtttgggggacagttctatggcatgagccatcatcatcagatgtatgctgttcagatggctggctatggatttggccagcaacctggagcttactacatcccgaatgcggcgtatgcttatgttagcgcgaatgagcttacccagaggatgaatgcggtttcggttcaggaaggtaattcacatggtggagcaatggcatccaggcctgaagattcactctttggtgatcttgtcagcattgccaagatgaaacagaacaaacctgcagctggcaaggttggtggcttgtaaggatgagtgattgagtgactagattcatattttctggtcatttgcagctgcaaaaacttttcctggcagtacataattttttctagttttgcagaaagataatacataatccttatccttattgccactttttgtgcgacgcaagaaggcatactaccctattgatgtaatttcagtttaggcaggattgtagggatataaattggaaagtaggttgagccttgagatgcttctggtgcctcatggcaaggttgtttatgtataaattctgaagtcatgtcataatcatagcagtttcatcaataatatccttatgtataaatgtctgataacaggtttacagc</dnaseqindica> |
| External Link(s) |
