Os02g0275200

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Revision as of 02:24, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0275200| Description = Xyloglucan fucosyltransferase family protein| Version = NM_001053075.1 GI:115445520 GeneID:4329001| Length = 6725 bp...")
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Gene Name

Os02g0275200

Description

Xyloglucan fucosyltransferase family protein

Version

NM_001053075.1 GI:115445520 GeneID:4329001

Length

6725 bp

Definition

Oryza sativa Japonica Group Os02g0275200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10117242..10123966

Sequence Coding Region

10117447..10118954,10123625..10123922

Expression

GEO Profiles:Os02g0275200

Genome Context

<gbrowseImage1> name=NC_008395:10117242..10123966 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:10117242..10123966 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcagcgcgggaggcggcggctgggacgacgacgacgacggcgacgagcagtgcgccacgccgccgccgccgcggtcgttctcgccgatgatgatgacggaggcaggcatgaagctggtgacgccgccatggcggcggtggcggcggtggcggggcggctgcgccgagagcgggagggctgtgcgggcggcgtgcgtggcggcggccgtggtgctcgccgtcgtcgtgctctcctactacgccagatggggcggcgaccaggacgagatgccgacttccttgttcaccacacgaggttcagagggcgcaacttcggcgaacctcaccgacgatcagctcctcggcggcctcctcaccgccgcattcagcccgcagtcatgccggagccggtacgagttcgccggctaccacaagaggaagccgccgcacaagccttccccctacctcgtcgccaagctccgcagccacgaagcgctccagaagcgctgcggccccggcacggcgccgtacgacaaggcgctccggcagctcaagtccggcgatggcgccgccgccgctgatggcgacgacgactgccgctacctcgtctccatcagctacaaccgcgggctaggcaaccgcatcatcgccatcgtctccgccttcctctacgccgtcctcaccgagcgcgcgctcctcgtcgcgccgtacaacggcgacgtcgccgccctcttctgcgagcccttcccggggacgacgtggctgctccccgacggcggtcggcggttcccgctcctgcacctccgggacctcgacggtaagtccaaggagagcctgggagccttgctgaagagcaacggcatcgtctccgtcgccgccggcgtgaacggcagcacgtcgtcgtcgtggtcgggccggccgccgccgccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgcgacgagcagcagcgcctcctccgcggcgtgccgtggctgctgatgaagacggacagctacctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccggagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtctggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggcatacagatccgcgtgtaccacgaggagacgccgccggtgtcgcaggtggtgctcgaccaggtcctctcctgcgcacgcagggagaacctcctcccggccgcagggaacacgtcgtcgtcggaccaggccgtgctcgtgacgtcgctgagctcgtggtactacgagaagatccgcgacgagctcggtggcggcggcggtggcgtgcaccagccgagccacgaggggttgcagcggatgggcgacacggcgcacgacatgagggcgctgagcgagatgtacctgctcagcacctgcgacgcgctgctcaccaccggcttctccaccttcggctacgtcgcgcaggggctcgcggggttgcggccgtggatcatgccgcggcggccgtggtgggagaaggaggcggccacggcggtgccggacccgccgtgcgcgcgggtggcgacgccggagccgtgcttccactcgccgtcgtactacgagtgcgcggcgaggcggaactacgacgacattggcaaggtggtgccgtacgtgcggcgctgcgaggacgtcagctggggcatccagctcgtcaatggaagcagccagagccagtggtag</cdnaseq>

Protein Sequence

<aaseq>MGSAGGGGWDDDDDGDEQCATPPPPRSFSPMMMTEAGMKLVTPP WRRWRRWRGGCAESGRAVRAACVAAAVVLAVVVLSYYARWGGDQDEMPTSLFTTRGSE GATSANLTDDQLLGGLLTAAFSPQSCRSRYEFAGYHKRKPPHKPSPYLVAKLRSHEAL QKRCGPGTAPYDKALRQLKSGDGAAAADGDDDCRYLVSISYNRGLGNRIIAIVSAFLY AVLTERALLVAPYNGDVAALFCEPFPGTTWLLPDGGRRFPLLHLRDLDGKSKESLGAL LKSNGIVSVAAGVNGSTSSSWSGRPPPPYVYLHLDGGADYHDKLFYCDEQQRLLRGVP WLLMKTDSYLVPGLFLVPSLRGELERMFPEKDAVFHHLSRYLLHPANAVWHAITAYHR DHLAGAGHLVGIQIRVYHEETPPVSQVVLDQVLSCARRENLLPAAGNTSSSDQAVLVT SLSSWYYEKIRDELGGGGGGVHQPSHEGLQRMGDTAHDMRALSEMYLLSTCDALLTTG FSTFGYVAQGLAGLRPWIMPRRPWWEKEAATAVPDPPCARVATPEPCFHSPSYYECAA RRNYDDIGKVVPYVRRCEDVSWGIQLVNGSSQSQW</aaseq>

Gene Sequence

<dnaseqindica>5013..6520#45..342#attgatcgaagaggattaagcttagcacatatagttgcatatacatgggcagcgcgggaggcggcggctgggacgacgacgacgacggcgacgagcagtgcgccacgccgccgccgccgcggtcgttctcgccgatgatgatgacggaggcaggcatgaagctggtgacgccgccatggcggcggtggcggcggtggcggggcggctgcgccgagagcgggagggctgtgcgggcggcgtgcgtggcggcggccgtggtgctcgccgtcgtcgtgctctcctactacgccagatggggcggcgaccaggacgagatgccgacttccttgttcaccacacgaggtaattcaacaagctcagtcgcatccagctccaaatgtttgttcatttttttttcttttttactcctttgaacttgatttacgttcttcttaattatggcttatcatcgaaagcttaattttcatcgcatgcttctcttaattacagtttatcttctaattaaatgcgtttgtaacaaatatatagcttctttcaaaagttaaccaatattccctccctctcaaaattttgctagttcatttcatacttacgttatcaggcactacttagcattattccgcatgcatccatattcatctatacagacacataagtgactactaattaatgagctgataaacatatggctgttttgcacatgtatggtgtttattctctctccggccagaggtttggctctggccatatatattaattatcaagataggagacatatatacgcacaccgtgtgaccatacgaacctgatccgttataaacgtacgtatattggagtgtgtatgtatggatcgaccagcagcaaattcattggcagcacctacatacaatgtaccccacctagaagtattggtcgcaattggtggacagcgaaattattgttggtgctcagaaaaggcatccatattgatattttgcttgtctcgtactacgtgcggtttggccggaaggatttgactttaccatcagtacagaaaaacgtctatatatggtggttaattggtttgtccatagctagatttgataactatagtccaggtaagacaattgacagttctggtttttgaaagaattaaagatgagcatgcaattcgttagtgaacacatttcttaattaattaattactctatatattacggtatatagtggtcctccttgtttcttttatttttgttatccgttttcctgtttcacttctctcttgtttctttttgtccatggctccaagcgctttttctttttcatccaggacgttttgtttcacttggttatcagcgtatatttgttttcatccagcacatttgttcattctatatgtacaccagtgttcttttattagcccttagatagaaagcaagaaatttgtgtttattctgtccatggtttttggcgatttttcatcccacgatatttcattgtctatccatacgtgttgaatattatattgtcgttttctaaacctataggcaaagcacgtgagatttgtattgtttttcctgtccacggttccaagagcctttttatcctgcgacatttcttccacctgctaattgcgtgtggaagactatactaccattgtccttttcttagcccataggcagcacaaatatttgcgttgaaacaaatagggattttatttcagaaaattggaaaataatagtggtacttaattttgttaaaaaaaactatctgtgattttaattaatcaatatgtaatataattctcaatatgggttttatgactatttgtttgcattttttatatctcagagtttaagttgttaatataccatattttggaacataaaaatatgatgtcgaaaatcatcacacaaaaatttagctttcaattactcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatgtatatatatatatatatatatgtatatatatatatatgtatatatatatgtatgtatatatatatgtatatatatatgtatgtatatatatatgtatatatatatgtatatatatgtatgtatatatatatgtatatatatatatgtatgtatatgtatgtatatgtatgtatgtatatatatatgtatgtatatatatgtatatatatatatgtatgtatgtatgtatgtatatatgtatgtatatatgtatgtatatatatatatatatatatgtatgtatatatgtatgtatgtatgtatgtatgtatggccggctgtgtgggttttttctcttatatggtgcatttcttctcgtccttttcttgtttcatccacgacgtttcttctatgtgaattattgcgtgtggaaaattatttaacatttgtcctatggccagctcatgtacagccaattcaagggatttttattgaactcacaagacttcttttttctttcagaatttggtaaaataattaatccacttagagaaacatattaaaatcacggtgcacacattttatttcatgtaccggtaaatatctatatatctttcgtgaaaaaaggtgcacatttttttcttgcaatatattttgtaccgataattttttttcaacacttatacataccatatctgattgatcttttatcagcatcaaaagtcataccccctccttcataaaatataagacgcaactaccactagcacaaagatcaaaaaagaattattatcaccttcttatttgtgtcactctaataaatacgtaccaatagaattagaaatttcgaggatgaagagtatttaaaaaaacgaactaaaaaagagaggaatatgctatttaattaattgcatgcttagatgcattcatgtttgcccaatatattgtaaaacataaaaaaaatcggttgtcccttttatattttagtatagagagagtatatagttgaattggacacttactttgaaagagcctgaaaaaaatcaacatcaaaatttctagcacagtaatttgttaactaaatagatatatacactagcttattattatctcccatgtcaattccattcacacatgtataaatactagtatatataaaaaatatacatgcacgtcaaaactatcgtacgtataggaaaagtctccaaagtgtatacacacatgtgcctgccggtcggccgatcgatcatatcaattactagtattatggagtggaggtagcactacctaataagtgatgcaagcaaggtgcatatatgcacgatggaacgtggacgagcgcacgcgcgtacatggacatgacgacgtcgacgcgaggtatagagctagcttactgcatgtttagttcgagaaaagaaaattttttggtgtcacatcggatgtttgaccggatgtcggaagggtttttgggacacgaataaaaaaactaatttcagaacttgcctggaaaccacgagacgaatcttttgagcctaattaatccatcattagcatatgtgagttactgtagcacttatagctaattatggactaattagactcaaaagattcgtttcacgatttctcccttaactgtgcaattagttttttcatttatctatatttaatgcttcatgcatatgttcaaagattcgatttgatgtttttaggaaaaaattttggggaactaaaaggggccttagctacagctgcatcatcgctcgctcgcgcaccaacgtcccagcctagctagctatgtgcgcaaaaccgcgcgcggatatatggcctacggctgttcgcgcgtctgggccacgcgcgcgcgcgcctggaccgcgtcatagacaccagttgttgccgtacacagtttgtgcacaatataccacacaagagtcccacatatgttcagtgacgaattaaattaatggaatggctaagtaatggcattcgactgattattggggttaaaattatgcagatttatcatctcgtgatttgtttcacgattctagcttgctccgatgatcccaacacttttcctccagctctaacaacactttcttctctagctcgtggcgacccgacaaagacaacggaattaggtttagtgttccgggttgggatgggggtatgacagggtggggagagcgtcggacttagagggaagaccgtgggagatgacgacccgacagtggacagtggatatggcttggcggtgaggcgccgaagccgtgggggtgacgaaaggacagtggaccggcgttggtgacaaggagcaaatcgaagcggcgggagccgccggagttgaagaagatgacagggcaggggcaccttgccgccattgacttgaggaggaggaaagcagggatcgaggggagggagagaagaccagctgtgggggagagggggctcgccggtgccgttcgagcctttcggccaaccaacgacgaggccaggtggtggcgctgggggtggtggcaaaacaagtggcgagggagcacttggtaccattgaaatggagaagcaaagataagagggagggatttaggattatgggagtctaaacgaatcttaaagtaaagcaatgtattggtccaaaaattataagatgtataagatttactcactcactttcatagggggagaggaggggggaggggggctatatgctatgtgcttttctcacgtcatatatgaaccataattgaaaacctatttttacctcatattttcctaataccgctctcttttatataataagacgttttggttttgaacatgttcttagaagaaaaaacatagtgataattataacaccaaattaattttattaaatttaacattgaatatattcttatcatatatgtatttttcttataaaatgttgctatgttttttttatatggatcttctgcggtactgcacccagtagtagcagtactaacaatccccactgatttatcaataaacttgatcaagctaaaaaaaagtttgaggggcatatgttgagacatttttgtgattgatcaggttcagagggcgcaacttcggcgaacctcaccgacgatcagctcctcggcggcctcctcaccgccgcattcagcccgcagtcatgccggagccggtacgagttcgccggctaccacaagaggaagccgccgcacaagccttccccctacctcgtcgccaagctccgcagccacgaagcgctccagaagcgctgcggccccggcacggcgccgtacgacaaggcgctccggcagctcaagtccggcgatggcgccgccgccgctgatggcgacgacgactgccgctacctcgtctccatcagctacaaccgcgggctaggcaaccgcatcatcgccatcgtctccgccttcctctacgccgtcctcaccgagcgcgcgctcctcgtcgcgccgtacaacggcgacgtcgccgccctcttctgcgagcccttcccggggacgacgtggctgctccccgacggcggtcggcggttcccgctcctgcacctccgggacctcgacggtaagtccaaggagagcctgggagccttgctgaagagcaacggcatcgtctccgtcgccgccggcgtgaacggcagcacgtcgtcgtcgtggtcgggccggccgccgccgccgtacgtgtacctccacctcgacggcggcgccgactaccacgacaagctgttctactgcgacgagcagcagcgcctcctccgcggcgtgccgtggctgctgatgaagacggacagctacctcgtcccggggctcttcctcgtgccgtcgctccgtggcgagctcgagcggatgttcccggagaaggacgccgtgttccaccacctcagccgctacctcctccacccggccaacgccgtctggcacgccatcacggcctaccaccgcgaccacctcgccggcgccggccacctcgtcggcatacagatccgcgtgtaccacgaggagacgccgccggtgtcgcaggtggtgctcgaccaggtcctctcctgcgcacgcagggagaacctcctcccggccgcagggaacacgtcgtcgtcggaccaggccgtgctcgtgacgtcgctgagctcgtggtactacgagaagatccgcgacgagctcggtggcggcggcggtggcgtgcaccagccgagccacgaggggttgcagcggatgggcgacacggcgcacgacatgagggcgctgagcgagatgtacctgctcagcacctgcgacgcgctgctcaccaccggcttctccaccttcggctacgtcgcgcaggggctcgcggggttgcggccgtggatcatgccgcggcggccgtggtgggagaaggaggcggccacggcggtgccggacccgccgtgcgcgcgggtggcgacgccggagccgtgcttccactcgccgtcgtactacgagtgcgcggcgaggcggaactacgacgacattggcaaggtggtgccgtacgtgcggcgctgcgaggacgtcagctggggcatccagctcgtcaatggaagcagccagagccagtggtagtgtaaaactgtagatcactgaattgtatagagtagaacatgtgttcagatgttccacaaaaatacaaaaaggcgcatgcattgtacaccacaaataatcaaataatctaggcagatgtaatgatataatggcaagaaataatcttagaagttagaacactgtgccattatacttatagcaatctatgacaggatgtgacattacg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0275200, RefSeq:Os02g0275200