Os02g0281000

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Revision as of 02:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0281000| Description = Protein phosphatase 2C family protein| Version = NM_001053094.1 GI:115445558 GeneID:4329023| Length = 8953 bp| Defi...")
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Gene Name

Os02g0281000

Description

Protein phosphatase 2C family protein

Version

NM_001053094.1 GI:115445558 GeneID:4329023

Length

8953 bp

Definition

Oryza sativa Japonica Group Os02g0281000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10448060..10457012

Sequence Coding Region

10450485..10451561,10451915..10452046,10452132..10452356,10452455..10452580,10452677..10452739
,10453114..10453196,10453978..10454209,10454321..10454631,10454719..10454794
,10454915..10454981,10455094..10455371,10455500..10455687,10456135..10456291
,10456396..10456641

Expression

GEO Profiles:Os02g0281000

Genome Context

<gbrowseImage1> name=NC_008395:10448060..10457012 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:10448060..10457012 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctgctcaccttctaaggtgtgttcatgtccacattataagggcagtttgtgcttctgtgactgtggatgctttggacaaacacctgactccccaagagagtcaaggggaaaatcaaaccgggttaggggaaagacagattctagtgcttcagatgcttcttctgatgacctagaggaagatgatgatggattgcaccaaatgaacattacaagggactctaatgttggtatcaatcgactctcaagggtctcatcacaatttcttccaccagaaggttcacgtaaagttcgaatcccattggggaattatgacctgagatattcctacttgtctcaaagaggctactacccagaatcattggacaagccaaaccaagacagtttttgtatacatactccatttggaacaagccctgatgaccatttctttggtgtatttgatggccatggagaatatggagctcagtgctcacaatttgtaaagcgaagactatgcgaaaacctgctcagagatgaccggttccgtactgatgttgttcaggctcttcattctgctttcttggcaacaaattcacagcttcatgcagacagcttagatgattctatgagtggtactactgcagtcactgtgctggtgaggggtaaaactatttacattgcgaatacgggtgattcacgtgctgttattgccgaaaaaagaggggaagatgttgttgctgttgacctgtccatagatcaaacaccctacaggactgatgagcttgaaagggtcaaggagtgtggtgctagggttatgacgttggatcagatagaggggctaaagaacccagatgtacagtgttggggcaccgaggaaagtgatgacggtgatcctccaaggttgtgggtgcaaaatggcatgtatccaggaactgcttttactcgcagcattggagattctgtcgctgaatctatcggtgttgtcgctaatcctgagatttttatcctggagctcaatgccaaccatccattctttgttcttgctagtgatggagtttttgagtttctttctagtcaaactgttgtcgacatgattgctaaatacaaggatcctcgtgatgcgtgcgctgcaattgttgctgaatcctatcgcctctggctacagtatgaaactcgtacagatgacattacaataatagttgttcatattaacgggttaactgatatggaatgtactcaaactgtaatgaaagtatctttacaaccttcccaacaagtcgtagaattggtaggctcagaatcaccatcgacaataagtttgaatcccaagaaccagcgttccaggcaagatctatcacgtgctcggctgagagcacttgaaagttccctggaaaatggtcgactatgggtccctccatccccatcgcatcggaagacatgggaagagcaagcacatattgagcgaatactacacgaccatttcctcttcaggaagctcactgactcacagtgccatgttttacttgattgcatgcaaagagttgaggtgaaagctggggatatagtggtgcagcagggcggtgaaggcgagtgcttctatgtagttgggagtggtgagtttgaagtgctagccattcaggaagaagatggaaaggaagttacaaaggttctacatcggtatactgctgacaaactatcttcttttggggagctagcactaatgtataataaaccacttcaagcttcagtccgtgctgtgactactggaactttatgggctctaaagcgagaggattttcggggaattctgatgtcagagttttcaaatataccatcattaaagttgctccgatcagtggagctgtttacgagattgacaatgcttcaactaagtcaacttgctgattctcttgttgaagtaacttttggggatggtcaaatgatagtagacaagaatgatgatgcatcttccttgtatattattcaaagaggtcgtgtgaaacttaaattggctgcagatcaggtaaattcagatgcctgggatcttcttagttctcaaacaaaggtggcccaatcaagtcgagaagatggtaattacgtgtttgagatagatgaagggggacactttggagagtgggctctctttggggagacaattgcttttactgctatgtcagttggtgatgtgacttgttctactattgcaaaggagaagtttgactcaattattgggcccttgccaaaagtttcccagtctgattccaagctcaaagattccttggttcctaaagggcatggtgcagatgatagttccttcaggaaggcgcagctatctgatttggaatggaaaatgtgcatatatgccgctgattgcagtgagattggtcttgtccaactaagaggttctgacaagatcaaaagcttaaagaggttttacatcaagagagtaaaagaccttcataaggaaaaacacgtatttgatgagaaggatctcatgaaatctttgagccaatcaacttgtgtgccagaagttctatgtacttgcgctgatcaatcctacctaggaatactgctgaattgttgcctttgttgctcactggcttcaatacttcatgcaccactaaatgagtcgtctgcacgattctatgcagcctctgtcgtcgtagcgctagaaaatctccatcagaggtccattctttacagaggtgtttctgcagacattcttatggtcgaccgatcagggcatcttcaactagttgacttcaggtttgcaaagaagttgcaaggtgaaaggacttacacaatatgtgggattgccgactctctagctccagagatagttcttggtaggggccatggattttctgctgactggtgggcgctgggagtgttgatttatttcatgctgcaatcagacatgccatttggctcttggagggagagtgaactggaaccttttgcaaagattgccaagggtcaccttgtcatgccatcaacattcagcatcgaagttgttgaccttattacaaagctactcgaggtaaacgaaaatgcgcgccttggggccaagggagcggaatctgtgaaaagacacccctggtttgatggcattgactggaaacaaatagcagatggtacttatacagtaccccaagaaatcaccgatcgtgtcgacagctatgtagaaactcttacagaggacttgacagcatccccttccatgccaagtgaagaaacagctgatcaggctgctccagaatggatccaggattggtga</cdnaseq>

Protein Sequence

<aaseq>MGCSPSKVCSCPHYKGSLCFCDCGCFGQTPDSPRESRGKSNRVR GKTDSSASDASSDDLEEDDDGLHQMNITRDSNVGINRLSRVSSQFLPPEGSRKVRIPL GNYDLRYSYLSQRGYYPESLDKPNQDSFCIHTPFGTSPDDHFFGVFDGHGEYGAQCSQ FVKRRLCENLLRDDRFRTDVVQALHSAFLATNSQLHADSLDDSMSGTTAVTVLVRGKT IYIANTGDSRAVIAEKRGEDVVAVDLSIDQTPYRTDELERVKECGARVMTLDQIEGLK NPDVQCWGTEESDDGDPPRLWVQNGMYPGTAFTRSIGDSVAESIGVVANPEIFILELN ANHPFFVLASDGVFEFLSSQTVVDMIAKYKDPRDACAAIVAESYRLWLQYETRTDDIT IIVVHINGLTDMECTQTVMKVSLQPSQQVVELVGSESPSTISLNPKNQRSRQDLSRAR LRALESSLENGRLWVPPSPSHRKTWEEQAHIERILHDHFLFRKLTDSQCHVLLDCMQR VEVKAGDIVVQQGGEGECFYVVGSGEFEVLAIQEEDGKEVTKVLHRYTADKLSSFGEL ALMYNKPLQASVRAVTTGTLWALKREDFRGILMSEFSNIPSLKLLRSVELFTRLTMLQ LSQLADSLVEVTFGDGQMIVDKNDDASSLYIIQRGRVKLKLAADQVNSDAWDLLSSQT KVAQSSREDGNYVFEIDEGGHFGEWALFGETIAFTAMSVGDVTCSTIAKEKFDSIIGP LPKVSQSDSKLKDSLVPKGHGADDSSFRKAQLSDLEWKMCIYAADCSEIGLVQLRGSD KIKSLKRFYIKRVKDLHKEKHVFDEKDLMKSLSQSTCVPEVLCTCADQSYLGILLNCC LCCSLASILHAPLNESSARFYAASVVVALENLHQRSILYRGVSADILMVDRSGHLQLV DFRFAKKLQGERTYTICGIADSLAPEIVLGRGHGFSADWWALGVLIYFMLQSDMPFGS WRESELEPFAKIAKGHLVMPSTFSIEVVDLITKLLEVNENARLGAKGAESVKRHPWFD GIDWKQIADGTYTVPQEITDRVDSYVETLTEDLTASPSMPSEETADQAAPEWIQDW</aaseq>

Gene Sequence

<dnaseqindica>2426..3502#3856..3987#4073..4297#4396..4521#4618..4680#5055..5137#5919..6150#6262..6572#6660..6735#6856..6922#7035..7312#7441..7628#8076..8232#8337..8582#ggattcccaccacctcctctcctctcctctcctctccttcttcctcttcccctgcactgcactgccactgcattaatccccttcaccgattcctcctctcctctcctccacctccacctccaccgcacgcaccaaaccgcagtttctctctctctccctttcgctgttcctgtgtgccttgcttagctgccgctttcctctctccctccctctctttctttcttcctctctctgctcaacctcacaaaaattccccccttttgctctttctctttctttcctccccgatcgacttcttcttcttcttcaccttctccagttctcctcatccgtcttcggcgatctttgccgctgtaagttagttacttcttgattaagctctgtttgtactcatgaagcgtggaatgttctttcttttttattcatgtcttgtcaggttctcttggcttctttgcagtgtgagtacttttattttgtttcatttttcctcttcttttttttctttttctttttctccctaccaagatacttcagtaatctttagcagaggggttgcttggcaattcggtttgcatgcaattgccgtgatactccagagtggggactctcttctctgaattcccctttttttttctttttccctttttccacacacccgtgactgtaaagcttctgtctttcaatcaactgctgtagcatgtagggtgctagttgcatctttagatgcagaggatagaacctgttcttccattctcttgcagtagtggtagcatccactttgcagagatgaaagaaagatcatctgcttcttgtgtcctgaatactcccttttgttttcttctctatagcatcttgtcagtagcagcattggtttataatgacatcgatttaggatttcaaggaaatggttgatcgaggctttgtcacgtcacctgcattttttctgtccatgggactgctctacctctcacgataaagttgctctcaactttttttttccacactgtggaactgactggtccaactaaacactcatgctgagcaaatgcatgcacctttatccatttggaggcctgtaggcttaattggagtaagaaaatcgcttttaaaaggagaaatgctcacaaactttttcgtttttggaaaatttgtcttatatacagtgagttcagttgtcttatatagcgttataagatgatttctgttacaattttcgtgctattttgttgtgtggtaattctcttcatctctgattatatgtagtactatttaacagtctggagttattcttaaagaaaatcaataagctcacagttttttttaaatgtccagaagataaagattccattcacacaaaaaaaaaatctatctttcacatacaactgtgattattcccttctttatgttcattgaaatatttaattctttctacttctaaggggttttgtgataaggttgtaaatgatgctcctggcttggtgctgtcactatcagaattcttctgcatgtcgttttgaacttgtccagtagttttgtagtgcacattcatgtcagttctagaggccaatgacttagacctgtttctggcattagtacttttccttttgtgcgttatcttgtcttggatgtagcctagagttctaccatatttctagaacttggacatatatatcagtttctgtcaaaacaattttgggtcagtgttttgtttttcaaatctgatggtgatgaatgtttgtacccaaatacttgtttcagaacttctatagatatctattatgttaaattttgatcgagactgattttgcatccattcagttgacagtacaattaaatttaatctttccatgtcggtttttatcctctgaaaattctctagtatagcagttgcatgctttattatgtcacctctctgccttatgtcatacacacaaaaaagaggagagttgctgttactattgtcaaaggatgattggatcaaagaatgtctatttatctcctttattttcctatatccgtaatgtcgtggttgcacttttctcttcaaagtgttgcttgtaatacttttgtgaactagatttttaaaataatccatctgacagtaggtcggttataagttattctctagctataactgacttctcttttttaaaaaaaaattcaggtgaacatttgacagtttacaggttcctccatttcagttgttggattaagaaagaggctttatgctttataaataagtaagcatcatcatcaatataagttgtggctgctcttaaagatcctcagattctgtacaagttcagagcttcctctgtttggcagtgtcagtacacgtgcttgcatagttcataactggggtggagatatcttagtttcatgttctttgtgcttcttggctcttacccagctggtttaacatctgatgggctgctcaccttctaaggtgtgttcatgtccacattataagggcagtttgtgcttctgtgactgtggatgctttggacaaacacctgactccccaagagagtcaaggggaaaatcaaaccgggttaggggaaagacagattctagtgcttcagatgcttcttctgatgacctagaggaagatgatgatggattgcaccaaatgaacattacaagggactctaatgttggtatcaatcgactctcaagggtctcatcacaatttcttccaccagaaggttcacgtaaagttcgaatcccattggggaattatgacctgagatattcctacttgtctcaaagaggctactacccagaatcattggacaagccaaaccaagacagtttttgtatacatactccatttggaacaagccctgatgaccatttctttggtgtatttgatggccatggagaatatggagctcagtgctcacaatttgtaaagcgaagactatgcgaaaacctgctcagagatgaccggttccgtactgatgttgttcaggctcttcattctgctttcttggcaacaaattcacagcttcatgcagacagcttagatgattctatgagtggtactactgcagtcactgtgctggtgaggggtaaaactatttacattgcgaatacgggtgattcacgtgctgttattgccgaaaaaagaggggaagatgttgttgctgttgacctgtccatagatcaaacaccctacaggactgatgagcttgaaagggtcaaggagtgtggtgctagggttatgacgttggatcagatagaggggctaaagaacccagatgtacagtgttggggcaccgaggaaagtgatgacggtgatcctccaaggttgtgggtgcaaaatggcatgtatccaggaactgcttttactcgcagcattggagattctgtcgctgaatctatcggtgttgtcgctaatcctgagatttttatcctggagctcaatgccaaccatccattctttgttcttgctagtgatggagtttttgagtttctttctagtcaaactgttgtcgacatggtatgttctatctaccttctgcataagttgcaattatgttctgagatcctaaagtgattcccttcagtactagagatacagagattcccccacagtatcagaattcagttctcaataatcatttactttgaaacagtagggaaggcccccctaatattctgcgtgcattttaattcatcgatttcccttttccactgtaccaatttgttggctaagatttccccacaatgtttatcaaaattaatcaacttctttattaaagagcccaaacaattctattaactatttttcagataattttagatttgtgaaatgaattgttttatttacttcttacagtaatgaatttgcagattgctaaatacaaggatcctcgtgatgcgtgcgctgcaattgttgctgaatcctatcgcctctggctacagtatgaaactcgtacagatgacattacaataatagttgttcatattaacgggttaactgatgtatggaattttcatcttttacttatattacttccactgcactggtttcatttggttccatgaataatcctcattcttttactagatggaatgtactcaaactgtaatgaaagtatctttacaaccttcccaacaagtcgtagaattggtaggctcagaatcaccatcgacaataagtttgaatcccaagaaccagcgttccaggcaagatctatcacgtgctcggctgagagcacttgaaagttccctggaaaatggtcgactatgggtccctccatccccatcgcatcggaagacatgggaagagcaagtaaggtcaccaatttccatcactgttgaactttgtattagttcaggagttcttgatatcctattactgacgagttaaaaaaaaaaactgatatgaaggcacatattgagcgaatactacacgaccatttcctcttcaggaagctcactgactcacagtgccatgttttacttgattgcatgcaaagagttgaggtgaaagctggggatatagtggtgcagcaggttcttattttctatgcttatttattttactggtactctgatgatattttttctggcttctaagaaattatttaatagtgggattatgtgatgcagggcggtgaaggcgagtgcttctatgtagttgggagtggtgagtttgaagtgctagccattcaggtatccatttttattcacatttatttaatgtgatattttcttaagacgctttttgcatagggtgctaaaactacaccctccattgttctgtacttgtcattttgatcattttttgagttaaaaatagtagtcatttttttcaagattgaatttcctattttgtccatactatgaatttgacattgtgattggcacatttaattggaaacctctagagtgttttttaaataagaagaaaagaaaaaatgtacttctattcagacgggtttaatcacttcgataaaagaaatcaactattttacaatataatttgttctttaacctttattcagtgatttcgaagtctaaattggtgaaatgataaaaaaaagcaggaagaagatggaaaggaagttacaaaggttctacatcggtatactgctgacaaactatcttcttttggggagctagcactaatgtgagatttgtattcacttgccctttagtatatttgctctgatcttttgcaccatgttttaagaagtcacgaaaattgttcatgagatcaatcaagataagtatcgtacaatagttatgaacaggtgcttacaaaaacgataggaaaacgtagtgccaataaaacccactactaatcggaacagtttaccctgtctcctatacagttctaaagcttgaagcttagtcccactagctaacatccagaattataaatacaatcgacttgattttttatttttattttttttgataaaggaagcttttattaatctcagacgattacatcaagttgatagaaccatactaagaaaactcctggcctctgcataactaggatgcacacagccaaaacacacaaacccacaaacccacaacttgattttttatgagaacaaactactggtgtgggttgatgtgtaatctctccacctttcttagtttagattttttgggtgaaagaccatccaactgtactcaaatgtacacttagcaacagaacttttagtaatggccactagcttttgaacatatcatcacttatgaatctgaaacctaccataccatgacatgagaaggcattagaaaataacattatggatccctccatggctaatcacagtaaaattaaaactaaatccaaaatgtatgtctatgtctctttatgcatgtattatgtatatgatggaaagttgaatcaattcagatggacatagactcaagttactattgttgaaaaacaggtataataaaccacttcaagcttcagtccgtgctgtgactactggaactttatgggctctaaagcgagaggattttcggggaattctgatgtcagagttttcaaatataccatcattaaagttgctccgatcagtggagctgtttacgagattgacaatgcttcaactaagtcaacttgctgattctcttgttgaagtaacttttggggatggtcaaatgatagtagacaaggtacttggactggaaaatgtttcctttagtaatattgttagaatgttcttctgcaaacttatgagtttcttctttatgttggcttacttattttgtgggtctttttttcagaatgatgatgcatcttccttgtatattattcaaagaggtcgtgtgaaacttaaattggctgcagatcaggtaaattcagatgcctgggatcttcttagttctcaaacaaaggtggcccaatcaagtcgagaagatggtaattacgtgtttgagatagatgaagggggacactttggagagtgggctctctttggggagacaattgcttttactgctatgtcagttggtgatgtgacttgttctactattgcaaaggagaagtttgactcaattattgggcccttgccaaaagtttcccagtctgattccaagtactgcatctgaaatacttttcacatagtttactgagcaaatgtttctcaattgcttactttgtcacatggatggcatctatgtaggctcaaagattccttggttcctaaagggcatggtgcagatgatagttccttcaggaaggcgcagctatctgatttggtagggggttagtactacccttcctttcctccagcatctgtttgtttatcagaggagattttgttgaaattttatacaaccacgtgtataaattttatacggctatatctttgtccacaggaatggaaaatgtgcatatatgccgctgattgcagtgagattggtcttgtccaactaagaggttctggtatgataatcagtttggccttcagtcattattggatcaattaattccctaataaacattatttatgtttttatctaatcctattttgtttggctgtctgatcatggaccagacaagatcaaaagcttaaagaggttttacatcaagagagtaaaagaccttcataaggaaaaacacgtatttgatgagaaggatctcatgaaatctttgagccaatcaacttgtgtgccagaagttctatgtacttgcgctgatcaatcctacctaggaatactgctgaattgttgcctttgttgctcactggcttcaatacttcatgcaccactaaatgagtcgtctgcacgattctatgcagcctctgtcgtcgtagcgctagaaaatctccatcaggtaagattttgattttgtttgttgaaaatttaacacaagaaaatttgtctctagggtttattctaacaggctaatccatacacgcttctcccgatgtaagtactaatgcatagtatatgcaatttcagaggtccattctttacagaggtgtttctgcagacattcttatggtcgaccgatcagggcatcttcaactagttgacttcaggtttgcaaagaagttgcaaggtgaaaggacttacacaatatgtgggattgccgactctctagctccagagatagttcttggtaggggccatggattttctgctgactggtaagtggctgtttatcacttccctatgtgaagcccacatgccatgtgttctgaattttatccaatatggatttatggctttatcttgtctgtccaagtgtacattgcttttaatgtaaatggtgatgattctgggtgaaggcatttacttccagattcacatgcaaatcttagacatttttacctcaactttctgacattttcagaggagattgaaataaattaatactgcaatggtaataaaacatcaaagagaaaccatgtgtttaattagaaaccacatattcatatttcttacatcaccttcatctcaaaagtagcacaaattatggtgccaatgaatggatatagtacaatactcgcgcttttgagttgtaaaagcacatatgcatgccttcgttcaggtaaagaatattaacagatggttctttggtttttcatcatcaggtgggcgctgggagtgttgatttatttcatgctgcaatcagacatgccatttggctcttggagggagagtgaactggaaccttttgcaaagattgccaagggtcaccttgtcatgccatcaacattcagcatcgaagttgttgaccttattacaaaggttatactatcccattatggattgttgtttttgattcagcggttcgtctattattcaccttgtcaggatttcctactatattgacacgaatactctctgaacagctactcgaggtaaacgaaaatgcgcgccttggggccaagggagcggaatctgtgaaaagacacccctggtttgatggcattgactggaaacaaatagcagatggtacttatacagtaccccaagaaatcaccgatcgtgtcgacagctatgtagaaactcttacagaggacttgacagcatccccttccatgccaagtgaagaaacagctgatcaggctgctccagaatggatccaggattggtgatctcagttgctgcatgaacaaaaagatgtttgggaaaacttgtttagcatttcaaatgaaaaaaaaaacgggtacatacatgattacagcatgtgaatttttgtcgaaatggtggattatacgtagcaacaattctgtatagaggaatcatcagctcaacctgcaaccatctgatggatatgctagcaaaaatgtgaaaaatggtgttgcagtagttcaagcaggagccagaactggtctgcagggagaactaatgattcctgtggtacatatgtatagacccttctttcatttgtaaatttatttgtattattcatctgtaggtgaaaattataactgcctacctatgtaattttgtataacattttgat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0281000, RefSeq:Os02g0281000