Os02g0282500

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Revision as of 02:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0282500| Description = Similar to NBS-LRR protein (Fragment)| Version = NM_001053100.1 GI:115445570 GeneID:4329029| Length = 3495 bp| Defi...")
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Gene Name

Os02g0282500

Description

Similar to NBS-LRR protein (Fragment)

Version

NM_001053100.1 GI:115445570 GeneID:4329029

Length

3495 bp

Definition

Oryza sativa Japonica Group Os02g0282500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10564633..10568127

Sequence Coding Region

10564633..10566202,10566247..10566296,10566745..10568127

Expression

GEO Profiles:Os02g0282500

Genome Context

<gbrowseImage1> name=NC_008395:10564633..10568127 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:10564633..10568127 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacttttcgaagattgtgggggctattaatggcatcaatgagatttccactttatgtaaaatggtcaaagatatcattaaatcttgctggagtggcatacgggagcaggagctgcaagacaaagtaatgaagttggagaatgacttggaacgtttcagagatattcttcctgcaatgtacaacctcattgatcgagcggaatggacgatccacaaagaccatgtgccagagcttcttctgaaactcaaggatgcagtttatgatgctgaggaccttcttgatgagttgaaatggcatgaactgaaggtggccatggagggctccgcaaacaaatctcctcttattgacttccttgatagtgtcattcaaggtagtttcaacaaagtgagtggtacctatgaaaaactgaataatgtttctagtctgctggagaagatggggttacatgaagttacacaacactttgacaaatccttcaggcccgagactacctctttcccaactgaaacagaaatgtttggtcgtgacaatgaattggagcaggtgatgcaatcgcttggagtacctgctaaaggtagccgggtcctttccaaacgcaagaaaccaagcagtgcaattaatgcatcaccaagcacatcaaaaacaaaacaacataacggtacacaaatgagtgatgaatcaggaatcacatgtattcctgttctgcctatatatggaattgggggtgttggaaagaccactttggcccagcatatctgccacgattcacgggtcatgtctcactttgacccgattatttggatttgtgtttcagatgactttgatgtgaagaggttaactaaagaagccatacaatcctgttctacaaaagaagctgataatttggattatcttcagcgtgctctttcagaagaagtgatgaacaaaaggttattgatcatacttgatgacatgtggggtgatgtcttgagggagagtggacactgttggaagaggttttgtgcacctttgacgaatgcgctacaaggaagtatgatgttagtcaccactagatctccagatgttgctcgtgaggtgcaaacaatggagcccatccgattagaaggattgcaggatgatgtcttttgggatttcttcaaattatgtgcatttggatctaagaattctgaaaattacccagagttagtgcacatcggtaaaagcatagtccaaaagttgaagggtgtacctttggccgccaaaactctaggacgcctattaagaatgagccttgacactgaatactggaataggatactaaaaagtgaactatgggagctgaaacaaaataatactgaaattttgccagcgcttagattgagctacctgtatttaccaacccacttgaagagatgcttctcattctgtgctgtttacccaaaagatcacaaattcgaagaggataatttagctgaaatttggattgcagaaggctttgtgcaacctgaaggtaacactctaattctagatactggcaaacagtactttgaagaccttgtaaaccggtctttctttcagagtgttggtgtttcaaaggatgactgcttcattttaaaagacaaggatgattttgagaagggagtcggacttacattgatgaagaacgtgaaccaaatttgtggaggagtgacgataaataatcttggtgcaacaagcaaggatattgcagcagaaagtgcgataaagaacaagaaaaatcttgacagactgaacttgaaatggtcttctgtgagatcgcaagaccataatgacatcgaggttcttcaagtcctaattcctcctaccagtctcaagtgtctgaccctctatggttatctaggtcaatctcttccaaattggttttatcctcataatctgccaagcttaaaatcccttgagtttcatgattgtcatagactttgtagcttaccattttatggtatatcaccaccgtgcatcaacctaaatgaggtacccgaggttccaattgagaacggtatgggtagcattggcgtattctcatccctggtcgacctaaagattgtgaagtgcgattacttatcaaacctcgacaaatttatacaaccagcttgtataccggctatcaagcgaatcacattacaaagattaacatacacaaagacaaaggtattgcctctaccaattggtaaatttgattgcctcgaagaattggacgtggctggttaccagatattcaatgcttcagaaagtctgtccatgcgcactctcaaggagctcaagctatgcaattctggggacctcccatgcttttttgagttcccctcccttaccaacatgttcttagtcgtcttgcctgtaacgtccattccactacgagtgtggtgcagtaaccttccagctctacttcgattaaaaatttatagctgtgcgaaccttgaatttattggggaatcagtcttcactggcaatcgtcctcaaagagacagttgcagcactacaacattcgcatcccttatttccctagaaatttgtggctgcgaaaagctgacaagcattgatgacctcgtaacgcctgagtatcttcctgctattgagaaaattgatgttagctcttgtgtcaagctatcgtccctgccaggtgaaagatttgggaatttctcagctctaaagcatctgcgtatttcttattgtggaaaactcaaatggaagggacttgttttaccatcgaccctccaaagcctctgcttaagttattgtggggatatctctccctgggttcccagttgcctggagaaccttgcctccttggtgcgcctgctgattaactcttgccaacatgtacaatacattcccagttcactatggagcagcaatctctcatcactccaggatttgcgtattttcaattgtagtgaccttgtatcaattggtggagcagatgcaattgtgaaaataaacaaggtgaagatagaaaactgtccaaagttgcaggaaatatag</cdnaseq>

Protein Sequence

<aaseq>MDFSKIVGAINGINEISTLCKMVKDIIKSCWSGIREQELQDKVM KLENDLERFRDILPAMYNLIDRAEWTIHKDHVPELLLKLKDAVYDAEDLLDELKWHEL KVAMEGSANKSPLIDFLDSVIQGSFNKVSGTYEKLNNVSSLLEKMGLHEVTQHFDKSF RPETTSFPTETEMFGRDNELEQVMQSLGVPAKGSRVLSKRKKPSSAINASPSTSKTKQ HNGTQMSDESGITCIPVLPIYGIGGVGKTTLAQHICHDSRVMSHFDPIIWICVSDDFD VKRLTKEAIQSCSTKEADNLDYLQRALSEEVMNKRLLIILDDMWGDVLRESGHCWKRF CAPLTNALQGSMMLVTTRSPDVAREVQTMEPIRLEGLQDDVFWDFFKLCAFGSKNSEN YPELVHIGKSIVQKLKGVPLAAKTLGRLLRMSLDTEYWNRILKSELWELKQNNTEILP ALRLSYLYLPTHLKRCFSFCAVYPKDHKFEEDNLAEIWIAEGFVQPEGNTLILDTGKQ YFEDLVNRSFFQSVGVSKDDCFILKDKDDFEKGVGLTLMKNVNQICGGVTINNLGATS KDIAAESAIKNKKNLDRLNLKWSSVRSQDHNDIEVLQVLIPPTSLKCLTLYGYLGQSL PNWFYPHNLPSLKSLEFHDCHRLCSLPFYGISPPCINLNEVPEVPIENGMGSIGVFSS LVDLKIVKCDYLSNLDKFIQPACIPAIKRITLQRLTYTKTKVLPLPIGKFDCLEELDV AGYQIFNASESLSMRTLKELKLCNSGDLPCFFEFPSLTNMFLVVLPVTSIPLRVWCSN LPALLRLKIYSCANLEFIGESVFTGNRPQRDSCSTTTFASLISLEICGCEKLTSIDDL VTPEYLPAIEKIDVSSCVKLSSLPGERFGNFSALKHLRISYCGKLKWKGLVLPSTLQS LCLSYCGDISPWVPSCLENLASLVRLLINSCQHVQYIPSSLWSSNLSSLQDLRIFNCS DLVSIGGADAIVKINKVKIENCPKLQEI</aaseq>

Gene Sequence

<dnaseqindica>1..1570#1615..1664#2113..3495#atggacttttcgaagattgtgggggctattaatggcatcaatgagatttccactttatgtaaaatggtcaaagatatcattaaatcttgctggagtggcatacgggagcaggagctgcaagacaaagtaatgaagttggagaatgacttggaacgtttcagagatattcttcctgcaatgtacaacctcattgatcgagcggaatggacgatccacaaagaccatgtgccagagcttcttctgaaactcaaggatgcagtttatgatgctgaggaccttcttgatgagttgaaatggcatgaactgaaggtggccatggagggctccgcaaacaaatctcctcttattgacttccttgatagtgtcattcaaggtagtttcaacaaagtgagtggtacctatgaaaaactgaataatgtttctagtctgctggagaagatggggttacatgaagttacacaacactttgacaaatccttcaggcccgagactacctctttcccaactgaaacagaaatgtttggtcgtgacaatgaattggagcaggtgatgcaatcgcttggagtacctgctaaaggtagccgggtcctttccaaacgcaagaaaccaagcagtgcaattaatgcatcaccaagcacatcaaaaacaaaacaacataacggtacacaaatgagtgatgaatcaggaatcacatgtattcctgttctgcctatatatggaattgggggtgttggaaagaccactttggcccagcatatctgccacgattcacgggtcatgtctcactttgacccgattatttggatttgtgtttcagatgactttgatgtgaagaggttaactaaagaagccatacaatcctgttctacaaaagaagctgataatttggattatcttcagcgtgctctttcagaagaagtgatgaacaaaaggttattgatcatacttgatgacatgtggggtgatgtcttgagggagagtggacactgttggaagaggttttgtgcacctttgacgaatgcgctacaaggaagtatgatgttagtcaccactagatctccagatgttgctcgtgaggtgcaaacaatggagcccatccgattagaaggattgcaggatgatgtcttttgggatttcttcaaattatgtgcatttggatctaagaattctgaaaattacccagagttagtgcacatcggtaaaagcatagtccaaaagttgaagggtgtacctttggccgccaaaactctaggacgcctattaagaatgagccttgacactgaatactggaataggatactaaaaagtgaactatgggagctgaaacaaaataatactgaaattttgccagcgcttagattgagctacctgtatttaccaacccacttgaagagatgcttctcattctgtgctgtttacccaaaagatcacaaattcgaagaggataatttagctgaaatttggattgcagaaggctttgtgcaacctgaaggtaacactctaattctagatactggcaaacagtactttgaagaccttgtaaaccggtctttctttcagagtgttggtggtaataaacatgtaatgatctgttgcatgacatggcacaactagtttcaaaggatgactgcttcattttaaaagacaaggatgattttgagaaggttcctccgagtgttcgtcatctgttcgtactccctagcatagcctttgattgtactcagttgctgagcctatgtaagcacacaaagttgcgcactctactgtgctacaggtctttacagaagcaaagtctagcttctgttatggaccattggtgtagtaaacttcagcatatgcgcgtggttttgtgtgcccacacaaaggagctaccgaagagtattgggaaattgaagcatctacggtacctggaaatctccggagcttgtcctttcaaaagccttccctcggagttatgtcacctacataatttgcagattttttcagctcgaaaatgcaaattagaaagcttgcccggtgacttcagtaagctatgcaatttacagaggttcgaatcatgtggatttaactctcccaaatggagaaagtcattttgatgcatccactgggcagggagtcggacttacattgatgaagaacgtgaaccaaatttgtggaggagtgacgataaataatcttggtgcaacaagcaaggatattgcagcagaaagtgcgataaagaacaagaaaaatcttgacagactgaacttgaaatggtcttctgtgagatcgcaagaccataatgacatcgaggttcttcaagtcctaattcctcctaccagtctcaagtgtctgaccctctatggttatctaggtcaatctcttccaaattggttttatcctcataatctgccaagcttaaaatcccttgagtttcatgattgtcatagactttgtagcttaccattttatggtatatcaccaccgtgcatcaacctaaatgaggtacccgaggttccaattgagaacggtatgggtagcattggcgtattctcatccctggtcgacctaaagattgtgaagtgcgattacttatcaaacctcgacaaatttatacaaccagcttgtataccggctatcaagcgaatcacattacaaagattaacatacacaaagacaaaggtattgcctctaccaattggtaaatttgattgcctcgaagaattggacgtggctggttaccagatattcaatgcttcagaaagtctgtccatgcgcactctcaaggagctcaagctatgcaattctggggacctcccatgcttttttgagttcccctcccttaccaacatgttcttagtcgtcttgcctgtaacgtccattccactacgagtgtggtgcagtaaccttccagctctacttcgattaaaaatttatagctgtgcgaaccttgaatttattggggaatcagtcttcactggcaatcgtcctcaaagagacagttgcagcactacaacattcgcatcccttatttccctagaaatttgtggctgcgaaaagctgacaagcattgatgacctcgtaacgcctgagtatcttcctgctattgagaaaattgatgttagctcttgtgtcaagctatcgtccctgccaggtgaaagatttgggaatttctcagctctaaagcatctgcgtatttcttattgtggaaaactcaaatggaagggacttgttttaccatcgaccctccaaagcctctgcttaagttattgtggggatatctctccctgggttcccagttgcctggagaaccttgcctccttggtgcgcctgctgattaactcttgccaacatgtacaatacattcccagttcactatggagcagcaatctctcatcactccaggatttgcgtattttcaattgtagtgaccttgtatcaattggtggagcagatgcaattgtgaaaataaacaaggtgaagatagaaaactgtccaaagttgcaggaaatatag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0282500, RefSeq:Os02g0282500