Os02g0283800

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Revision as of 02:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0283800| Description = Similar to SERK1 (Fragment)| Version = NM_001053103.1 GI:115445576 GeneID:4329032| Length = 6393 bp| Definition = O...")
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Gene Name

Os02g0283800

Description

Similar to SERK1 (Fragment)

Version

NM_001053103.1 GI:115445576 GeneID:4329032

Length

6393 bp

Definition

Oryza sativa Japonica Group Os02g0283800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10663658..10670050

Sequence Coding Region

10663892..10663964,10665898..10666030,10666144..10666215,10666928..10667071,10667171..10667242
,10667351..10667416,10667503..10667573,10667696..10667836,10668247..10668588
,10668889..10669283,10669381..10669695

Expression

GEO Profiles:Os02g0283800

Genome Context

<gbrowseImage1> name=NC_008395:10663658..10670050 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:10663658..10670050 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggagctgcgcgtcgccgtcctcatcatcgcggtctcgctgccgtccttctccgcgtccgaccgccaaggagatgccttatatgatatgaaacaaaaactgaatgttactggcaatcagctttcggattggaaccaaaatcaagtcaacccttgtacatggaattctgtaatttgtgacaataacaacaatgttattcaagtaacattggctgctcgtggatttgctggagttttgtcaccaagaattggagaactgaaatatttgactgtcctgtccttggctggtaataggatttccggtggcataccagagcaatttggtaatctttctagtttgacaagcttagatttagaagacaaccttttggtgggagaaataccagcttctcttggccagctttctaagctccagttgttgatacttagtgataataatttcaatggatcaattcctgacagtctagcaaaaatctcaagcttgactgacatccggctggcgtacaataatctgtctggtcagatacctggtccgttattccaagtagcacgttacaacttttctggtaatcacttaaattgtggaaccaacttcccccactcttgctcaaccaacatgtcctaccagagtggatcccatagctcaaaaattggcatagtacttggaacagttggaggagtaataggacttctcattgtagctgctctctttctgttctgtaaagggaggaggaaaagccatctgcgggaagtttttgtggatgtagcaggtgaggatgatcgacgaattgcatttggccagctcaagagatttgcatggcgagaactacaaatcgcgacggataatttcagtgaaagaaatgttctcgggcagggaggttttggtaaagtttacaaaggtgttcttccagatggtactaagattgctgtaaaacgattgactgattatgaaagtcctggtggtgaggccgccttcttgcgtgaggtggagctgattagtgttgcagttcaccgcaatcttctaaaattgattggcttctgcacaacacaaacagagcgcctcctggtatatccattcatgcagaatttgagtgttgcctaccgattgcgagattttaagcctggagaacctgtcttaaactggccagaaagaaaacgggtggccattggtacagcacgtggactagaatatctgcatgaacactgcaacccaaagatcatacaccgtgatgtcaaagcggcgaatgtcttgcttgatgaggactttgaacctgttgttggtgattttggactagcgaagctagtggatgtgcagaagacatctgtcactactcaagtccgtggaacaatgggtcacatagcacctgaatatctatccacagggaagtcatcagagagaactgatgtttttggctacgggatcatgcttcttgagcttgtgactggccagcgtgccattgacttctcacgcttggaggaagaggacgatgttctattgctcgatcatgtaaagaagctacaaagagaagggcagctaggatccattgtggaccgcaacctgaaccagaattatgacgacgaggaagttgagatgatgatacagatagcattgctgtgcacacagtcatcgcccgaggatcggccatccatgtcagaggtggttcggatgctagaaggcgaggggctggcggagcggtgggaggagtggcagcaggtggaggtgacaaggaggcaggagtacgagcggatgcagcggcggttcgactggggagaggactctgtctacaaccaggaagcaatagagttgtctggaggtagatga</cdnaseq>

Protein Sequence

<aaseq>MRELRVAVLIIAVSLPSFSASDRQGDALYDMKQKLNVTGNQLSD WNQNQVNPCTWNSVICDNNNNVIQVTLAARGFAGVLSPRIGELKYLTVLSLAGNRISG GIPEQFGNLSSLTSLDLEDNLLVGEIPASLGQLSKLQLLILSDNNFNGSIPDSLAKIS SLTDIRLAYNNLSGQIPGPLFQVARYNFSGNHLNCGTNFPHSCSTNMSYQSGSHSSKI GIVLGTVGGVIGLLIVAALFLFCKGRRKSHLREVFVDVAGEDDRRIAFGQLKRFAWRE LQIATDNFSERNVLGQGGFGKVYKGVLPDGTKIAVKRLTDYESPGGEAAFLREVELIS VAVHRNLLKLIGFCTTQTERLLVYPFMQNLSVAYRLRDFKPGEPVLNWPERKRVAIGT ARGLEYLHEHCNPKIIHRDVKAANVLLDEDFEPVVGDFGLAKLVDVQKTSVTTQVRGT MGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLQ REGQLGSIVDRNLNQNYDDEEVEMMIQIALLCTQSSPEDRPSMSEVVRMLEGEGLAER WEEWQQVEVTRRQEYERMQRRFDWGEDSVYNQEAIELSGGR</aaseq>

Gene Sequence

<dnaseqindica>235..307#2241..2373#2487..2558#3271..3414#3514..3585#3694..3759#3846..3916#4039..4179#4590..4931#5232..5626#5724..6038#aaataaaggaaaaaaaaaacactcgagaagttcttctcctcctcctctttccccttcctctcgccgccccaaatcacccgcccaccaaaaccctcgccgcggcctccgccgccgcgggattccggccaccaccagcagccgccgcggccaccggggcgccctcctcctcctgccccccggcaccggcgaccgaccatccccttgccccctttccccgtcgggttgtgaggcgagatgagggagctgcgcgtcgccgtcctcatcatcgcggtctcgctgccgtccttctccgcgtccgaccgccaaggtaccttagctttttgctgctctccgaccccagtcgcctcgcctgcgacgccccccggttgtctcctccgagcttctgtgtagtgtagtgtagtgtagtgcagtactgtagcttcaattttcgcatggtagattaccgaacgccttgtggattacatgccgtggcacactgtcgcgatggtagcgaagtaggtaaccagatgccatgtggaattgctgtattgatttccaacgctacagaccttaggttaccttcaattgataatacatagcacaccttgcagtaggtactactgctcgctttcgttttgatagcttggaactactgcttttggtcaaaacttgccttaaatgtgaacgtactgctagttgcttagtccaaacaaagggaaaagaaggcgccaacatgctaactaatgcttcgttggctgacgtggtcgcctgcgcaccagtctaaatctaaaggtttatccaaaaatagcatggatttgaaaatgctgcatattttgagatattaagaaattgcggaaagtaggcacatgttttctcaaaactttagaactgtcaaggtttttatcctgaaatgactgtttttgtttatatcgatggcttcactgcagcattaatgttatgtgataattgcatttttggaattgtgtctgggaaatacatgtggtggatgcaacaatacatattacactctttgaatccccatatgttatatagtgagaatattctttatttgccctacaagttagtaacttaccttatttgctcctatgaatgttcccctgttgaccacttaaactcagtttatgccccttattattgaccctcccaccaccctcctgtaactgttctgtgaactatgatggaacatgtcaattttgcccttcttccccctcaatcccttcattgccatcttatatatcttcattggacggcatttccccatcttgtcttctgctggtaccgtggacgggaggctaattggccaaagaagagggaggcagcggagaaacagagatcatcaaagctgtccgtctcatgcaaatctgccatccacaccattcgtcgagctcatgacaccattttttcactgggccactggagctcatgacaccatgactgtccttccatggcctaccgcctttgttgagattacgacagttttgtggccctacctagtctttcccaagctcacagcatccatggctggtgtcatcagatcttgccacagacactgctctgtctttcaccaatctcttgactgccacagccctcttgccataaacaaaaatgtgatttgctgcaatttacagattacagagagagttatagagaagattagatcaacatggaaatcaggcctatacggaaaccatgggatctatctattctaaattcctaaccatttttcccctaatagtggaaatcaagtaaaatgcaagtgccctgattgttgccggatggaagaaatcggacgggagagagaaaaaagtgagagtgaaaaggaaaaggtgaggaaggaaaagaagaaactgacagtggccgggatcaggggtacagctgctatatgagcaaaatagtgagaagaatattcgattaactgtatagcatactaacagaatgtaactggaaggggaaaagaggagtgaaagttgagttggcaaatgagggattatagtttctgtaaggggaaatgaaaagaattttctctacagagtgaaaacacgggcaacaatattcatattagatgcccctatcatgcgagcttattattacttgaaaatttattcctcatttttatgagtggcgaatctttggttggcactaactttggtgtaatcctgaggtattaagttagttgatgaacatagagtaacttgttatttatcctctggttctcaaaaaccttttgtatgttttaccaggagatgccttatatgatatgaaacaaaaactgaatgttactggcaatcagctttcggattggaaccaaaatcaagtcaacccttgtacatggaattctgtaatttgtgacaataacaacaatgttattcaagtgtaagttggagctcatgcaccttctcatcttgtacacttaaattttatactgattcccacctctgctctttgtcctgtttgttttcattttttatgataatgctttcctacagaacattggctgctcgtggatttgctggagttttgtcaccaagaattggagaactgaaatatttgactgtcctgtgagtacattattctattatgtagattaataatacttgggaattcaatatatgagtgttcaataaatggttatgaagttggtaggaaaaccacaatctatactaaattaagagaaaaatattttctcaatacttgaaagtatttctgtaatttgaaaaatataaataggtggcatgagtaattccaacaagtttgtgctgaccccagaaactgttgttaatattgctttcagttcctctatttaatccctttttaaaaggcaaacactaaggtagaaccctactggaaaatcattggatcaaaataaaataaatatgcaataaaaaagttaaaaaaatcaagaagtccaagcacccaactctgcaagatctgcacaaaatcttaaggtcaattctatggagttctgttcctggtagtttttctcctgtgctttcttgttgattggggttaactgtagtttcatgacaggtctgagtttaactgattttttcagtataaaagatcaatttcttctaaccagtaaccataaaaccatttttaactgagagaaatgcattgtaccaatgttacaactgctaattcttgattttggaaggtggtgtgagtatgtttttgtgtcctgcatgaactgatggttaggttaagtgcaatatgattctcctgtcgattctctccaactattatgaaatgctgttgtgtatgatcttgcaggtccttggctggtaataggatttccggtggcataccagagcaatttggtaatctttctagtttgacaagcttagatttagaagacaaccttttggtgggagaaataccagcttctcttggccagctttctaagctccagttgttgtaagtatatctgcatttcatcattctcttcttttggtgcatacaatcaaaatgattcatcatttttcatgctttctgtcctttttgtcacctgaccaggatacttagtgataataatttcaatggatcaattcctgacagtctagcaaaaatctcaagcttgactgacatgtaagagtatacatcttggctaagtatgatctcttttttaaaatttctgtttctgctaacactagttcatcttccatttgttgacaaacaactttttttttatggcagccggctggcgtacaataatctgtctggtcagatacctggtccgttattccaagtagcacgttacaagtatgtcaagatctctctaaaaacagtttaatccaattttttttaaaaacctgagtgactgatgaaggttcaattttcatgaatagcttttctggtaatcacttaaattgtggaaccaacttcccccactcttgctcaaccaacatgtcctaccagagtaggttaaatcctcattagtttatttatatatttactgatacggagtttgtctcctagaaaagatgtcaccttataattctgtactatttcttaattgttctagaatttttcatattacaggtggatcccatagctcaaaaattggcatagtacttggaacagttggaggagtaataggacttctcattgtagctgctctctttctgttctgtaaagggaggaggaaaagccatctgcgggaagtttttgtggatgtagcaggtatttgttttcatgttcttgtagttgatttgtttttagtacctgcatctatcatcagtttttgtggttgtggcaggttacttcttttgtggctttgtggttaggtttattagttcctgcataattatttctcttgctaatgtctcctggttacacaaatgctacatgttcttgtgtaaattgtaacttatccgcatgatcaaagccgatgatcgtaagctatgtcctcaatcaaccaaaacaagcaggtgcacctatttgtgacctcagtttgataagtgtgtgatttatgccttaatctttttttctaaatagaacatgtgaaggtatctctgtgatttatacctagcttcatgtttgcttgacagtgtgcattgaatgaagtaatgtaaaaaaattgtgattcacaggtgaggatgatcgacgaattgcatttggccagctcaagagatttgcatggcgagaactacaaatcgcgacggataatttcagtgaaagaaatgttctcgggcagggaggttttggtaaagtttacaaaggtgttcttccagatggtactaagattgctgtaaaacgattgactgattatgaaagtcctggtggtgaggccgccttcttgcgtgaggtggagctgattagtgttgcagttcaccgcaatcttctaaaattgattggcttctgcacaacacaaacagagcgcctcctggtatatccattcatgcagaatttgagtgttgcctaccgattgcgaggtatcaatatcgtacttctccatccctaatgccctattgccttataaagtttgcttaaatgtgctgctattattatttggagtatctgtgaacagaattttgtcatttgcttaatttacggttacagatggtgggcattgagtttttcagtttaatattttaaataaacctcaagtcatgcactcatgtggttgatttgtattttctatagacttgaaaattgataaaattaatttaacctttatagttatttggtgtgagcttcatggcatattgtttgttgtgttgaaatcgatgcagattttaagcctggagaacctgtcttaaactggccagaaagaaaacgggtggccattggtacagcacgtggactagaatatctgcatgaacactgcaacccaaagatcatacaccgtgatgtcaaagcggcgaatgtcttgcttgatgaggactttgaacctgttgttggtgattttggactagcgaagctagtggatgtgcagaagacatctgtcactactcaagtccgtggaacaatgggtcacatagcacctgaatatctatccacagggaagtcatcagagagaactgatgtttttggctacgggatcatgcttcttgagcttgtgactggccagcgtgccattgacttctcacgcttggaggaagaggacgatgttctattgctcgatcatgtaaggcttatttactctaccactattaaccactctaccatgttccttgggaaattttggaaactgtgtccttacatggtgcttgttctccttttaggtaaagaagctacaaagagaagggcagctaggatccattgtggaccgcaacctgaaccagaattatgacgacgaggaagttgagatgatgatacagatagcattgctgtgcacacagtcatcgcccgaggatcggccatccatgtcagaggtggttcggatgctagaaggcgaggggctggcggagcggtgggaggagtggcagcaggtggaggtgacaaggaggcaggagtacgagcggatgcagcggcggttcgactggggagaggactctgtctacaaccaggaagcaatagagttgtctggaggtagatgacaagggccgtgacaacagacatcaaacaaacggcgtaagccgaatctgtactttttctgtaatggatgtagcgttgttctttgtagagtagatagaattgtcctggaacaacagcgtaagcgatagctggtaaatgatacaatcggatggataatgatatgatagaaaaataaagttgtatgtgtttggttgggcatggctgaaccttagcagttgtgtgctccccatgcactgttatcaaatcggccgattagtcgtaaagtcggtcaaattagttgactaaagagccatgactctgaccaaattagtcgtaaagtcggttgtaaattagtcgtgattattgtagcaaatcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0283800, RefSeq:Os02g0283800