Os02g0287000

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Revision as of 02:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0287000| Description = Similar to 40S ribosomal protein S3a (CYC07 protein)| Version = NM_001053113.1 GI:115445596 GeneID:4329042| Length =...")
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Gene Name

Os02g0287000

Description

Similar to 40S ribosomal protein S3a (CYC07 protein)

Version

NM_001053113.1 GI:115445596 GeneID:4329042

Length

3023 bp

Definition

Oryza sativa Japonica Group Os02g0287000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:10851641..10854663

Sequence Coding Region

10851955..10852050,10852956..10853156,10853265..10853450,10853546..10853683,10854296..10854401
,10854534..10854592

Expression

GEO Profiles:Os02g0287000

Genome Context

<gbrowseImage1> name=NC_008395:10851641..10854663 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:10851641..10854663 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaagaagaccgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttctccgtccgcaacatcggcaagaccctcgtctccaggacccaggggaccaagattgcatctgagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaatttctggggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaaacattgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgcattggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggctagccagatccggcagatccgccggaagatggttgagatcatggccaaccaggcatcaacatgtgacttgaaagaactggtttcaaaattcatccctgaagtcattggaaaggagatcgagaagtcaacttcaagtatattccctctccaaaatgtgttcatccgcaaggtgaagatcttgaaggcaccgaagtttgatcttgggaagttgatggaggtacacggtgactacaaggaagatgtcggtatgaagctggacaggcctgctgagactgacgaggcggtggcaggggaggttgcagcagctgagtag</cdnaseq>

Protein Sequence

<aaseq>MAVGKNKRISKGRKGSKKKTVDPFSKKDWYDIKAPTVFSVRNIG KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDQAYRKVRLRAEDVQGRNVLTNFWG MSFTTDKLRSLVKKWQTLIEAHVDVKTTDNYMLRLFCIGFTKRRPNQVKRTCYAQASQ IRQIRRKMVEIMANQASTCDLKELVSKFIPEVIGKEIEKSTSSIFPLQNVFIRKVKIL KAPKFDLGKLMEVHGDYKEDVGMKLDRPAETDEAVAGEVAAAE</aaseq>

Gene Sequence

<dnaseqindica>2614..2709#1508..1708#1214..1399#981..1118#263..368#72..130#acctcttctcccacctgcgccgccgccactcactcccaaaccctaaccccggaggagagggaggagcagccatggccgtgggcaagaacaagaggatctccaagggcaggaagggcagcaagaagaagacgtaagctgcttgcgcgcgggcggtgtgggcgccacacctctcgtcctctctgagctgcttgttcttgcttggggtttttgggggattctgatttgggacttcttctctttttctctctccgtgtgggtgcagcgtcgatcccttttccaagaaggattggtacgacatcaaggcgccgaccgtgttctccgtccgcaacatcggcaagaccctcgtctccaggacccaggggaccaaggttcgttcgttcgttccccattcgcgcccgtcaacctcaatccgcgatctgatccatgctttcattttgtatcactgtctgtgagtacatgtgcggaatctatctgtttggatctgcgtggctgcgtcattctatatctgagtaggctaagggattaatgttggcgttgatgtagttattgtgattgtgatgtcttgatgcatttttatgttttggctagaagtttgtttcgttaatgcaaatgtgggagttctggcaagatttcttctgtgctgtacttgttctactctcctagatttttatggctgatacatggaatgtttcatttcatttgatgaacactaatcatatatataagttcttgaggtgattgattcttgctgagatgtacttggagtaacctttttgctgcctttaatgtttgctgcctttaatgcgtcatacatcaaatgcttgatttcagtaacactatcatgtgttctcactaattagatattttagtctgatgtttaaatacccaagatatttctttgtgtaatcttcctaaggttatctgaattttttacagcactatgtctgttgctgattattattcatgaaattattttctagattgcatctgagggtctcaagcatcgtgtctttgaagtctccttggcggatcttcagaatgacgaggatcaggcttacaggaaggttagacttcgtgctgaggatgttcaggggaggaatgtcctcacgaatttctgggtaagaatgagcattgattgttcattaatccttttgtgttgtatctgtgatcccttttgtcctatgtagtctaaaccaatacatattttctctagggcatgagttttaccacggacaaacttaggtccttggtcaagaaatggcaaacattgattgaagcccatgtggatgttaagaccacagataactacatgctccgcctgttttgcattggtttcaccaagcgccgcccaaatcaggtgaagcgtacctgttacgctcaggctagccagatccggcaggtaaaagttttgtcatacttttttgcatgttctgtactaggtaagttcttgttttttgagatgaggtatgttcttgttgtttactttatttttgtccactgtttgaagatccgccggaagatggttgagatcatggccaaccaggcatcaacatgtgacttgaaagaactggtttcaaaattcatccctgaagtcattggaaaggagatcgagaagtcaacttcaagtatattccctctccaaaatgtgttcatccgcaaggtgaagatcttgaaggcaccgaagtttgatcttgggaagttgatggaggtgaggaaccttattctcatgcctagctagatgcctttagtgctcctggttattcttctgagaaatgtattagcatggttattggctttggaatcttattagaaaatctatctagtatatttgctatgtgttggaatcaactatgtttactaactcccctgctataacctggctgccctaaaatacttagttcaggattttgctttgacttgaatactaacttttagtgtaagatgttgcaataccgagttttaacaatatattttagggtttatgacattatgcatttagataatttttcctgataaaaaattcctaggcaattttgtgctcttaggcagccaatattagctcaaatcttatattagggcttgccttctgtaaatagtgctgtactgtagtgttgatttggaagcaagacttactcaagtattaggggggctaaatgacctggccggagttcttttttttactgtcacagaatgtagcaagtaaatttaaacatgatatggcgtccaagtacaaaacatgtttgttaacagcctcaaataacgttgaaggcagccaacacaaattggcctcagtatgctgcctcttgatgtcctcagtagtgccagatgttttttttccactcctagttcctgtgtgtacgtaactttactagccaaacacctgtgcttttctgtggattaaatctaattaatagtgaggtttttgggacaatttcattcctgtagatgttgttacagatgaaatatgataaaatcatggatagtttggatagttggtacaaaacatgatggagtaggtgggaaataaaaataatactgtacttggtggcaccattgcccttgtttaaaaggagtatagattctgagaaaatgtggtctttattggttttacaggtacacggtgactacaaggaagatgtcggtatgaagctggacaggcctgctgagactgacgaggcggtggcaggggaggttgcagcagctgagtagagatggtgttgctagttgctttaccttttaggagatttgggctgttactaaattatggatgatcaaaacttaatgtcagttccgatacccttttttgtctgccgagttggtttctctgattaaaaccatggaaaattgtgagactgatttcatggccagctcattttgaatgcagttgaatgattagtactatatgatagtataatactactggttagatcattgctatgcatttgatcatgatctgctcagcttgcgcattggcaatggtatacacctggtgaattacattctggaatgcggtggtttggacc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0287000, RefSeq:Os02g0287000