Os02g0293400
| Gene Name |
Os02g0293400 |
|---|---|
| Description |
Similar to Ubiquitin ligase SINAT5 (EC 6.3.2.-) (Seven in absentia homolog 5). Splice isoform 2 |
| Version |
NM_001053134.1 GI:115445638 GeneID:4329066 |
| Length |
4073 bp |
| Definition |
Oryza sativa Japonica Group Os02g0293400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 2:11186093..11190165 |
| Sequence Coding Region |
11186494..11186856,11186997..11187383,11189571..11189870 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008395:11186093..11190165 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008395:11186093..11190165 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggacatggcgagcatcgagtgcgtctcctactccgacagcatggatgacgacgacgacgatggcgtcggcgtcggcggcgtctcccacctgccacgccccatcctcgtcaagccctcctccgccgccgccgccgtcaacgtggtcgtcgtctccgcgggcagcggagggggcgcggggggaggaggaggaggggtcggggtcgtggccggggcccccgccgtccccccggcgacgagcgtccacgagctgctcgagtgccccgtctgcaccaactccatgtacccgcccatccaccagtgccaaaatggtcatactctgtgttcaacctgcaaaacccgtgtgcacaaccgctgcccaacctgtcgacaggagcttggtgatattagatgtctagcattggagaaagtggctgaatcgcttgagctaccctgcaaatattactcactaggttgtccagaaatctttccgtactacagcaaactcaagcatgaatcacagtgcaatttcaggccatacaactgcccttatgctggctctgaatgctcagttgtcggggatattcctttcctagttgctcatctgagggatgaccataaagttgacatgcactcagggtgcacattcaaccatcgctatgttaagtcaaaccccagagaggtcgaaaatgctacttggatgttgactgtctttcactgctttgggcagtacttctgcttgcatttcgaggccttccaacttggagtggctccggtttacatggccttcctccgttttatgggcgacgaaaatgatgccaggaactatagttatagccttgaggttggcgcgaatggccggaagatgatatgggagggcactccccgcagcataagggacagccaccggaaggttagggacagccatgacggcctcataattcagcggaacatggctctgttcttctcaggcggagagaggaaagagttgaaattgcgggtcaccggccgaatctggaaggaacagcagaatcctgactcgggagcctgcattccaaacctattcagctga</cdnaseq> |
| Protein Sequence |
<aaseq>MDMASIECVSYSDSMDDDDDDGVGVGGVSHLPRPILVKPSSAAA AVNVVVVSAGSGGGAGGGGGGVGVVAGAPAVPPATSVHELLECPVCTNSMYPPIHQCQ NGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPCKYYSLGCPEIFPYYS KLKHESQCNFRPYNCPYAGSECSVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNP REVENATWMLTVFHCFGQYFCLHFEAFQLGVAPVYMAFLRFMGDENDARNYSYSLEVG ANGRKMIWEGTPRSIRDSHRKVRDSHDGLIIQRNMALFFSGGERKELKLRVTGRIWKE QQNPDSGACIPNLFS</aaseq> |
| Gene Sequence |
<dnaseqindica>3310..3672#2783..3169#296..595#aattacaagccacccccacccaatccccccgcaccaccacaccaccattacacccgcaatcaaccgcccccaccaccaaaccacaccaccccgcaacccaaacgctaacgcaacaatcccctcctctccaaatccaattccaaatccccatccgccgccgctaatcggaatcgcggcggatcaccctccgcctccgacgagggttcgacccgatcgactccccctgccccggcgggctcgcgggcggcgggcggggggctgagctgagagctgaattcgggttcgatctgtggccatggacatggcgagcatcgagtgcgtctcctactccgacagcatggatgacgacgacgacgatggcgtcggcgtcggcggcgtctcccacctgccacgccccatcctcgtcaagccctcctccgccgccgccgccgtcaacgtggtcgtcgtctccgcgggcagcggagggggcgcggggggaggaggaggaggggtcggggtcgtggccggggcccccgccgtccccccggcgacgagcgtccacgagctgctcgagtgccccgtctgcaccaactccatgtacccgcccatccaccaggtccgccattcttggggttcttgcggtttctttctactactaggatctcctctcaccgcaagggagtcgtcgtcggtggggtggaatcgcgtgatccggtgctgtgagagggctggatcttcgttgcgtgtctgtttgggggttcttgatcctggggcttcttggatactgcctttccctgccacgggaaaacatggcgtgcttgctgcatttcaggggataggatggttgccgcggcgtgttgatttcaacttgcaatgctgtttaaacaacgataatcaattacggactgagaggatccagcaatttctcatttcaggagataaaattattgttctgattattgtctagtgacaccactgctcttcacgtttagttaatgcaatcggtataattgaccccatttaggttacaggtttacggcaaattgaaaccaaatatcaacacctagctagtatctcttctttcgtctttcttttttctttttgggagaggaatcgagtatctcctgttgtgaatatattcttatgtctggaatcagcagcatgtgcggcagaacatttggagatgaggatcggcctatctttgccttgttacgtcacttcgcgaatcccatgagtctttactttgacgccctctttcatggtattagatgcttggtagtggaaaatatcactgggatgcaaggatgatcactacaacaaatgctagtgaagtgttgggttgtatagaacagttcatttctagccttttttagtgcatttctttttgtagtctaggggatgtgttgtatgcatgcttgtatgcccttacacaagtggaaggtaaggcttaagttgggacatggaagatgtcatgtagtttaagatgatcggttattctttttgttacctgttatttcgttttctttatcgttctgttgcaacttattacctttttattaaaatttacttggaagcagctgtattaactgtttgttaagaagtattgcccaatgtatcaaaatcttttcctgcatgcactttggactgtattactgcttgatggactattatggtcatatggtgtcgtatgatgtgtcacatttttaaaacgaagtgatgacctgttaactgacctaaaggttacacttttttatatcagggatatgttgtcacattatagtttgttataataccaaaatttcatatctggagtggcttggagattattataataccaaaatttcatatctggagtggcttggagattattatttttttgtctattgtgaatttgtgttgctagttaggtcactgggagcctgaagaattaccaagcatgctttctgtgatcctgttagaggtgtaggttaagtatctttctactatagaagtctttcctaacatcaaacataaagacgtaccattattaataacctgtgcacggacatgtagttttatcgcaacatttggcacagcgatcagattcaagtgaggaaactgtgtttgatgaatgatctcaatgagtcgtcacaacatatagagcaggcaggggcggatctaccgcccggtgaccccagacatccatctgggctcgtcgatggataatccattaaaattccatgtaattagaaaatttgagatagaatttcggtagtaaatattagctatagtgaagcttgcccaggctgtaaaatatttctgattagctactaagcaggcaattaatgcggacaatgatgttattatgccagaaagagctgaacttttccaaaagcagttacaaaccacaataaaaaccatattttaatccttcttgttaggatttcataatatctcatgaatcaggaagcttttaaacaaaagtccatgttgtaccatttgtatgtgagttttgcgtctgtggtattccatcacaaatacatggacatagtacatgttttctccctctccctctctttttttgtggtattttcactgtatctttcatcttgtgttgatgcagtacattcttgtttgttgacattaactatttttctgtagttcttgctttagtaatactcctggtagaaatttgtctgagtgaaaatatgtcctatttagctatttttagcatgaagcttgaatctttctaggttcagcatttacaagtcagaattcaatataagtaattaataattgactaatattttttgccatattacagtgccaaaatggtcatactctgtgttcaacctgcaaaacccgtgtgcacaaccgctgcccaacctgtcgacaggagcttggtgatattagatgtctagcattggagaaagtggctgaatcgcttgagctaccctgcaaatattactcactaggttgtccagaaatctttccgtactacagcaaactcaagcatgaatcacagtgcaatttcaggccatacaactgcccttatgctggctctgaatgctcagttgtcggggatattcctttcctagttgctcatctgagggatgaccataaagttgacatgcactcagggtgcacattcaaccatcgctatgttaagtcaaaccccagagaggtcgaaaatgctacttggatgttgactgtaagtgtttacctttattgccttctatcacttgcagtctcattaacatatatattggtgtgggtggtacaatttaactgcaagagttttttttatccatgtttaaggtgatatttgatacttatttattatccttttaggtctttcactgctttgggcagtacttctgcttgcatttcgaggccttccaacttggagtggctccggtttacatggccttcctccgttttatgggcgacgaaaatgatgccaggaactatagttatagccttgaggttggcgcgaatggccggaagatgatatgggagggcactccccgcagcataagggacagccaccggaaggttagggacagccatgacggcctcataattcagcggaacatggctctgttcttctcaggcggagagaggaaagagttgaaattgcgggtcaccggccgaatctggaaggaacagcagaatcctgactcgggagcctgcattccaaacctattcagctgaactgaaataacaagagagaaggattcggattcggattcggtttaggtgtatattgggtgatgcgtgtggtgcacctgtgcccgcttctgtaatttgtttgtgttgcttccacttttcttccacgtagccgttgtggcctgccctaaattagttagggctgacgtgtgaggaccatgaaaaaaaaatacggcttgagctttgtgggttctgattgatcacatgataagaaatttctcgatttgtttcttttgcccttgtgccccattttgagatgggaggccattatgctctttcttgcttgtaatttgcaaccattgatcagagcattttctgggtttgtatgttttcatctatgcttgattgggtattcgggtgttaagtatccatccatgacgaaatgg</dnaseqindica> |
| External Link(s) |
