Os02g0294100

From RiceWiki
Revision as of 02:25, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0294100| Description = Cyclin-like F-box domain containing protein| Version = NM_001053138.1 GI:115445646 GeneID:4329070| Length = 5442 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0294100

Description

Cyclin-like F-box domain containing protein

Version

NM_001053138.1 GI:115445646 GeneID:4329070

Length

5442 bp

Definition

Oryza sativa Japonica Group Os02g0294100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:11217429..11222870

Sequence Coding Region

11221501..11222772

Expression

GEO Profiles:Os02g0294100

Genome Context

<gbrowseImage1> name=NC_008395:11217429..11222870 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:11217429..11222870 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcgcaagcgcccgcgccctccccagccgtcgccgccgccgccggtggcctcctccgccgcctcctcctcctcctcctcggtgctcgacgacggggacctcctccgcgagatcctcctccgcctcgcccaccccaccttcctcgtccgcgccgcgctcgtctgcaggcgctggctccgccacgcctccgaccgggccttcctccgccgcttcgccgtcctccacccgccccgcctcctcggcttttacgtcgacagcgccagcctcccgcgcccgcgcttcgtgcccctcccccacccgcccgagctcgccgccgtcgtccgccgcggcagcttcgacctgggcaccgccgccgacctccacttccacctcggcacggggatctactgctgccggaacggccgcctcctcgtgtgccacaggggcggcggcgagtccacgctccagctccgccgcccgctccatccggcgagcgacggggcggtcatctccaccttccgcacgccgcctcgccctctcccgcccaaccagcgccacacgcggtatatcctcctccccgaggacggtggcgatggcgatggcgatgccgtggcgtgcaccgtggtgaccctggtgagcagcgagcgggaggtcttcgccaaggtggagaagatcttgcgagctggggtctgggacgtcgcgcaaacctcggcgcccattgagctaccggcgcactggaggagatcattgagccggggttttcttgtcaatggcaagctgtatatgttgggcacaacagggtacattcttggattggaattggtgtccatgagcttgttcttcatcgaggtccccgatgccgtgcgagatgactgccctgaaagctttcagctgagcgttaagctgtcgcaagcggagaaatctgggctttatctgatccatgtggaggggtttaagatccatgtttggcttcacggaacagatggaaacagctctgccgattggaatctagtaaatactatttgtttgcgcgaggtgtttggtcatcttgtgaagcctagttgggagtcaggggattcacgcattagtctgcctgggtctggggacaacgctgagtttgtgttcttggaggtggatggtgaggtcttttgcatggatattatcagcaggacagtggagaaggtgtatgagatggcaatgaaggatgattttctatttgagatataccccttcatgatggtttggccaccaatcttcccagcattgatcaaaacacatgaaccagagtga</cdnaseq>

Protein Sequence

<aaseq>MDRKRPRPPQPSPPPPVASSAASSSSSSVLDDGDLLREILLRLA HPTFLVRAALVCRRWLRHASDRAFLRRFAVLHPPRLLGFYVDSASLPRPRFVPLPHPP ELAAVVRRGSFDLGTAADLHFHLGTGIYCCRNGRLLVCHRGGGESTLQLRRPLHPASD GAVISTFRTPPRPLPPNQRHTRYILLPEDGGDGDGDAVACTVVTLVSSEREVFAKVEK ILRAGVWDVAQTSAPIELPAHWRRSLSRGFLVNGKLYMLGTTGYILGLELVSMSLFFI EVPDAVRDDCPESFQLSVKLSQAEKSGLYLIHVEGFKIHVWLHGTDGNSSADWNLVNT ICLREVFGHLVKPSWESGDSRISLPGSGDNAEFVFLEVDGEVFCMDIISRTVEKVYEM AMKDDFLFEIYPFMMVWPPIFPALIKTHEPE</aaseq>

Gene Sequence

<dnaseqindica>99..1370#aaatcaagatttcgatttacatccccaaatgaacgggaggtctcccaagtctccatttgttggtaattaccccacgatccacccaaaaccgcgtccacatggatcgcaagcgcccgcgccctccccagccgtcgccgccgccgccggtggcctcctccgccgcctcctcctcctcctcctcggtgctcgacgacggggacctcctccgcgagatcctcctccgcctcgcccaccccaccttcctcgtccgcgccgcgctcgtctgcaggcgctggctccgccacgcctccgaccgggccttcctccgccgcttcgccgtcctccacccgccccgcctcctcggcttttacgtcgacagcgccagcctcccgcgcccgcgcttcgtgcccctcccccacccgcccgagctcgccgccgtcgtccgccgcggcagcttcgacctgggcaccgccgccgacctccacttccacctcggcacggggatctactgctgccggaacggccgcctcctcgtgtgccacaggggcggcggcgagtccacgctccagctccgccgcccgctccatccggcgagcgacggggcggtcatctccaccttccgcacgccgcctcgccctctcccgcccaaccagcgccacacgcggtatatcctcctccccgaggacggtggcgatggcgatggcgatgccgtggcgtgcaccgtggtgaccctggtgagcagcgagcgggaggtcttcgccaaggtggagaagatcttgcgagctggggtctgggacgtcgcgcaaacctcggcgcccattgagctaccggcgcactggaggagatcattgagccggggttttcttgtcaatggcaagctgtatatgttgggcacaacagggtacattcttggattggaattggtgtccatgagcttgttcttcatcgaggtccccgatgccgtgcgagatgactgccctgaaagctttcagctgagcgttaagctgtcgcaagcggagaaatctgggctttatctgatccatgtggaggggtttaagatccatgtttggcttcacggaacagatggaaacagctctgccgattggaatctagtaaatactatttgtttgcgcgaggtgtttggtcatcttgtgaagcctagttgggagtcaggggattcacgcattagtctgcctgggtctggggacaacgctgagtttgtgttcttggaggtggatggtgaggtcttttgcatggatattatcagcaggacagtggagaaggtgtatgagatggcaatgaaggatgattttctatttgagatataccccttcatgatggtttggccaccaatcttcccagcattgatcaaaacacatgaaccagagtgattcgacaaggtttccctcgagatgatttgcataatcaagtgatgatatatgatgattctgctacttctgtagtgaggtaattgtacaaaataaaattgatgaaaagtttgatatccaagttgatttacctcatgattgcccatactgtttaaaccaaaggtcttcttttcaatgccataatcataagtcgcatgtcttttctaaaaatacgtaatcccagcctatgctactgtttcaatgatgataggcaaaatttgcatcccaccctcaagcactagtggaacaatcgatgtgaagttaaaatcccatttatgtagctagtagggaacaatgcactaatatggttcacctatataaatgtccattcttgagggactttagctagaaatgatagttaatttgtcagattttgatgctttactgtctgttacaatcaccacaacaaaaaatattttggcatcagcatatctaaatcactagagaaactcactcgcatttttgttagtcatcattgtcatgactttgttacaagggaaaaaaaactctcatgcttggtggagatacaataaattaactggagcagggctgctggagaactagataacagcttgtacatatctgtatttcaagacatctcttacctgattattgtgagaagtcaataggataaatgcatatttttggtatacgcacgatgcattgttttatctgaatagattggaaccggtgaactgttatgagaatctctttgttcagaaataaatctggacagtaaacatttccccatggctcaagaaggtggtgggctttagtcaggcggctcagcggctgggtggcgcctaatgtctaattgacgcctaggcggtgcctaggtcatcaactagtcaaatccaagaaattagcaagcatattacataaaagtatactatgtaacactaaaatagcaaccaaacaccacccaaagtagttcagctgcctaatgcaccatctaatgcctaatcatgctacccggtgcctagtgcctaatggtcacctatcacctacttttagaacactgattttgccaccaaaacataccttttttattatcatttttacttttttgtttctgtgtatctgtgcaagttactgtcatttgcactttctgtaacatcaggtgtggttgcacaatttaatgctaggattccaagcatgtttccttggtacaggtctccataggactgcactagaattctgtactattacaacatgaatatctccttaaaaaggaatgacataaacattttttctagatgaggtgatttgcactcagtctatggcaatggcattcatcacctttgaactcttattatttaatagaagtgttccataataagttgagtttcagtttgctcctaaatcttggaagttatcagagtattcagaatgtaatatgcctgaattactaaagaatttaagacattgtgcaaaaccaattcacaaccacatacttaatagtttaaaattttccaagttctaagaggagccctgaggatgcgtgcaccaaggccaaggcacaggcgccacagtgctatgttatttcctaaattccatatactatttgtaaataaagttaagaattggcaacaaagagttcacgtaaagcacatgcaattgtcatgtttatcaatcaatttgtatttatgcttattgcacgaaaaggatccctgaacattcgcactagactcaaattggtccaccaactactaaaatgtccaaagtagtcctcaaagttccaaatttggctcgttttatccattactgatttgacagggcaccatggcactctgagttagtgtggtcactgttttcctgaatcacacatagcaagaagactgaattgctactccaagcaatttaatcacaatcatcaacactgattattccaaaatttctatagatgatcactatccatcgagtaaattgcttggatggcaattggacttctaacagtgctgagcaagaaaactcactgtacagggtcagcactatggtgtcagagcagctcagtatacgggctgaaatgaacctgttaattgatgctctagaggctaacgtttttccgctttcatatttgaggaggcaatttcgatctcatgaaattgagggaccatttggtgattcttatgtgtatgcattgattaactattgagtgttgacacctgcagcttaaatttatcttatatcttgattcagtctggagtaaagtggattctagtcttgttcttggattatggcttttataataccatattactgattacaggatttaaagtaatttttcatttaaaaaggttaccattttgcgatattcaatactaccttgttatgtggcatttcttttttatgtttataatatatggttacatactaacagaattaatattacctaagtatttttaaggttacatgttgacaatataatatttgaaggaaatctaacagtatttggtgccaggctgcccgcaggtttgactctttaaccttctattatttttaaggttcttgattatactgctgcattatttgagctatgaacgttttttgctacgtcttccttggctgcagactcttgctcttatctacatatactataatttgtttctacttgatgattcaatgttcttaactagaaagtgtcttcaagaatcggtgtaatttattttctttgaaacaaaagacttgatgaacttataataccaaagcttttcatttaaccttgataattgccatttgtttcagtacccgagtctccaatgagcttaggttccggttgtccaagagctgtcatgttcgatgtcattgttgccgtcattgagtcgctgatgattggctgctttgcatggctgtcgtgttgattctcggagatcacttctccatcatattcactactcaccagcgatgtgaagctgtggcaggccgttgccaagattgcagggcttcttggtttgaccatggtgctcaacagtgtgcagcctgtggtgtcaggtaaatctaatgtttacattttcagctcaaagattctagtctacaggtggatcttgacacttgacaggaggtgcctctgcccaaaaaaattgaatttgtttgaatttataaattcaaattcagtgaaaatctatccaaaatttaaaattttcagtttgcaaagttacatttcccccctgaaatttctgaatttcagtgccctgattttttttcttttggcattcgaaaattgtgaatcctggtatagtctgcacttacacatagaaaagcagatagcttggatatggaaataaaacagattgcttagtttttttttttgtcacaatttcaatttttatttttctttggatacaaaaatgaaaaacagataactcggatatggaaataaaacagatagctcagttagtcctggaagtgaaacactgtcataatacctttgcttttagttagtcattaaatcaaaatgtctcaggatcctcgtacatagatacttttaggccaaaaaaaattgcaaccgagcactctagtttcgtgacttttatctaggacactgcaaaatcatgtcactgccaccaggtattacattgcaaagcatttatactatggttataaattaaatgtaaattactttgtcatcgaacttttttcagttttgtaagtgaatggtcaataccatactctgttactaatttgtttcgacctgcctagttttcgtgggcacctaaatctaaacctcgctcatcttcattctgccatttgcaggccacacgtgtttcaacctgcgtgcaaaagtggggaggcacagatgaagcaatcaagcttctcttaacgggaaattagtactggaaattttacccttctgttctgtcactctgcaaacctgctacacgtgttttagggctcatatgaaattctgaatgatattttttttcttgccatagaattcgttcgtgttttacaatttactgtcaagtttgcttcaattcccaatatacacacctgggaggacttgtgcctctgatgataatactacgagtaaaatgag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0294100, RefSeq:Os02g0294100