Os02g0299200

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Revision as of 02:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0299200| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001053150.1 GI:115445670 GeneID:4329087| Length...")
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Gene Name

Os02g0299200

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001053150.1 GI:115445670 GeneID:4329087

Length

5671 bp

Definition

Oryza sativa Japonica Group Os02g0299200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:11507302..11512972

Sequence Coding Region

11507333..11507425,11507532..11507873,11511754..11512281,11512362..11512856

Expression

GEO Profiles:Os02g0299200

Genome Context

<gbrowseImage1> name=NC_008395:11507302..11512972 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:11507302..11512972 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaagaagcacgccgccgccggcagcggcggcgggtggctcgccgccgtcaggaaggtcttccgcccctccaaggacgccgccgacaagaagggtggcggcggcggcgatagggaggaggaggcggcggcggaggctgcgccggaggtccttctgctggagcatttcccggcgggcgggacgtcgccgtcggcggaggggacgggcaatgatcagggcggcacggtggtggggaaaggggagggtgaggaggaggacggcgaggacgggtacggcgaggtggagcgcgcgagggcgctggcggcagcggcggaggcggcggtggcggcggccgaggccgcggcgagggtggtgaggatgtcggcgctccggcgcgcgtcgcgggaggagcgcgccgccgtgcgcatccaggcattctaccgcggctacctggcgcgtcgagccctgcgcgcgctccgcgggctggtgcggctgcaggcgctggtgcgcggtcaccaggtgcggcgccaggtccacctcaccatgcgctgcatgcaggcgctcgtccgcgcccaggcccgcgtccgcgcccgccgcctcatcaccgaccacatccacgccggcgtcgccccgctccgcctcccgccccttcctcccgccaccgccgccgccacctacagctcccggcgacgggaaggcggatactcgtggcatcctctccgcaacaattcgtaccacgctcagctcggcgagcgagacgagagcgacgacgacgtcgacggcgacggcggcaaggttggcgagcacgcgcggcagcagcagcagcggcaacgaggcaacgacgtcaggagcaggagccctttccggagctgggacggcagcagccgcaccccggaggaagacagggccgagggcgtgcgccggcacgacgccgccgctcgccgcgagcgcgcgcgcgcctacgcctacggctaccagcagagacaatggcaggagaaggccggcggcttccaatggctggacagatggatggcagcgcaagcgcagcagcacgcgccggagcccgacaagagccgccgcagagccgccctgacggccgccgccgacggcaccaccatgcccgagaggacggtcgagatggacacgacgtcgtaccggagcccgctcaactcgcactccgccgccgtgcagggccggccgccggctgtcccaggttacatggcggcgacgcaggcggcgcgcgccagggcgcgcacggcgccgccggccaccccggcgcacgccaggagccggtccggcgccgttctcgccggggacacgtcgagctcggggcagagcggcagcggcagcggcggcggcggcgcgcatgtacaaaaaccgtgcgcggtgtacagcccggaatcgagaggcaccggcgactggacgccgccacggctcgccgtcagcagccgcgccaccaggttggtgtacgcttga</cdnaseq>

Protein Sequence

<aaseq>MGKKHAAAGSGGGWLAAVRKVFRPSKDAADKKGGGGGDREEEAA AEAAPEVLLLEHFPAGGTSPSAEGTGNDQGGTVVGKGEGEEEDGEDGYGEVERARALA AAAEAAVAAAEAAARVVRMSALRRASREERAAVRIQAFYRGYLARRALRALRGLVRLQ ALVRGHQVRRQVHLTMRCMQALVRAQARVRARRLITDHIHAGVAPLRLPPLPPATAAA TYSSRRREGGYSWHPLRNNSYHAQLGERDESDDDVDGDGGKVGEHARQQQQRQRGNDV RSRSPFRSWDGSSRTPEEDRAEGVRRHDAAARRERARAYAYGYQQRQWQEKAGGFQWL DRWMAAQAQQHAPEPDKSRRRAALTAAADGTTMPERTVEMDTTSYRSPLNSHSAAVQG RPPAVPGYMAATQAARARARTAPPATPAHARSRSGAVLAGDTSSSGQSGSGSGGGGAH VQKPCAVYSPESRGTGDWTPPRLAVSSRATRLVYA</aaseq>

Gene Sequence

<dnaseqindica>32..124#231..572#4453..4980#5061..5555#gtgatcggatcccctccaccccgcgcgcgccatgggcaagaagcacgccgccgccggcagcggcggcgggtggctcgccgccgtcaggaaggtcttccgcccctccaaggacgccgccgacaaggtagcaatggcggtcgcgtgcgtggttctcatcgttcttgatcgtatcgatcacggtcacggttcgtgtgagtcactctcgatcgtgtctcgtgcgtgcgttgcagaagggtggcggcggcggcgatagggaggaggaggcggcggcggaggctgcgccggaggtccttctgctggagcatttcccggcgggcgggacgtcgccgtcggcggaggggacgggcaatgatcagggcggcacggtggtggggaaaggggagggtgaggaggaggacggcgaggacgggtacggcgaggtggagcgcgcgagggcgctggcggcagcggcggaggcggcggtggcggcggccgaggccgcggcgagggtggtgaggatgtcggcgctccggcgcgcgtcgcgggaggagcgcgccgccgtgcgcatccaggcattctaccgcggctacctggtacgtacgtatacgcgcgcctagcaaaccaaacctgaaaaaaatcatgctctgtttatcaggataattttgtgcaaacatgcttttactatatttatcttttctaaaataatcgtgtgcatatttgcatccacatcaaatcgtcaactacacaaaaactatatggtaataatttattgttaaaaatgttaccgaagatatggattgttttagaaaagataataatttattgttaaaaatgttaccgaagatatggattgttaaaaatgttaccgaagatatggattgtttctgtttcacaatatttattcattaatttgagccattatttcacattatttagtgagcgtgtgtatagggggctcacttcactcgcaagtagtgtgggcgtgcagagtagagtttgtgtttgtgcgccactcacgtaaaaacaaccgtatgactaaaatcgaaacagcagttattgaaacattttgacctgcagagaggtggtagttagttatagcatttaaaagaggcatctactgtcgttttgtcccaactatttgctggggtgagatcttggcaagtgtacatgtttttgtttatagtaacaagttaactgtaaaaagtttgaaaacgaacagagtaccagttggattactgatagaacatttccccgcaaaataaataaataattaaaacgaaggactgccagtagaacataactttcacaatcaaaacaccaccaacacattaagtcttttgcgccagacaaaaattccgaagggaagtacacaagaaatcaaaagaaaaatcataatcaagaattgagaggcaaaaaaggtggtgagtgtgtgctcaagttggtggcaagatctcgtgttagaatcagtgggggcacttttaaggtgatcagtcttaactcatctagcttaaaacctacaagcgaggtatcaggatcgcttacaccgcaaggagtgactgattagatagatcttagggaccagggggaagaggtgacttggggacaaaacatgaatcaattattacatgttttctcagcttggggtaattcaaaatgtttgacaccgttgactttttagtatatgtttgaccgttcgtcttattaaaaaaatttatgaaatatgtaaaactatatgtatacatgaaattatatttaacaatgaatcaaatgatatgaaaagaattaataattacttaaattttttgaataagacgaatggtcaaacgcgtacttaaaaagtcaacagtgttaaacattttaaaacggatggagtatattacatgaatcagcacggctttaacgcagttacagagactacttctcctacctgtgattattgatcattggtcgtctcatatgcatatccatccaccttgcttgattggcacctaccatatcagaccatccaggacggatagtaactgcgtttcatgtccggatgccaaacaactgggtactacttgacagtttcaacgttggaccattgtgtattgcttttttgtgtgcagtttagtgcttgtcttctagtgtaaccgcaacaaatcgtgtgctgtaagtcccatgattacagaggaaatcatgcattccggtcaaccatattagcccaaatctagtgcttaagccactaaacattccttgttttctttattttacgcaaattggttacacacaatatttgttaagattatgactcgtttggaaaaacacaaggcactgcttgattataatttcagtttgaattttagaatttgattctaaaactaatttttggcaggccgggttttcttcgccaattttattagcaagctctatttttatgactaaacaatattcctaaataatttttaaagaaatcaaatttcaaaattttgcctttttctagtcaaagtagtgacaagcacagcctgtatatttttgttgaattaattattaaactcttttgaaaaaccctcctttaaaaagacatttttaaatatttattataatacttcacaaataaaccctagcctagcaaaaagaacgaacaaatgagcacacaaacctcaaatggggagatatttttggggatgtagcctaacttgaatgtggttcaaattgggcctcgaaacatagtatttcaccgatgattgggataagcaagagagagggatagcaggttggtctaggaaacacctagtacacgctcagttacacgggcgcccctgcacggtgggtttccccctctggtctctcctctgtatacgaactttgtatacatatgatacaaattttatacgtatgtattcaaagtatatgcatacgtgtatatataaagtttatatagtatttgtttacaaactttgtatatagacttatacaacttttatatgtatataaattgacacgtatatgtatactttttgacatataaatatttttattaatatgcgtgtacaaaattggtatatacatataaagtttgagtttgtatgtatacatatacggaatgttcgtatggtacatttgtcgtgcgggaagacacgcgtatgcctagtcactaattagtgattttggttggtctagtcaagtacgcaggaaagggagagaggagagaaggaacgaagcaggagccgaccccgagccttattagggcatgtacaaaattagagtcagatgtgagctctatcacctagaaattattctcttacaacatttgaggcaatatggtatctaaccattaatgtacgaaaataattttttctttctcttctttcctttctttcaaccccgtgcaacaaaatatttcctaataaatgttaagagtcgactttgagatgtcatgtgtaaccatgtttctctttcctgttctttctttctttcatgttaccaaatttacttgcatggtaatttatagaactcactaataaaaatcgttgtacatgcccttggcctctgccatattagatagattggagcaatcctaacacgccatttaccttatgtggtcccatatcctctgctatcatgacatcctttgccatgctacatgcgcattggccacattgaaaataacaacttgattgaaacatagtgtagtatatttttaaatttttataataaaaaggttttaaaaagttctccagaggtcttaggctgagttcttctcttctagttaccaactcccttcgattgaggtctataggaaagttactctaaaaatgatattaatctatttttaagttttgtaggtaatacttaataaatctcgtgttaattatttgctttgttttccgcgtggcaggaggctaaggttgcttgtcttcgaactcaggccccgtttagtcacaaaatttttttcccaaaaacatcacatcgaatctttagacatatgcagggagcattaaatatagataaaaacataaactaattgcacagttagggaggaaatcgcgagacgaatcttttaagcctaattagtccatgattagctataagtgctacagtaacccacatgtgctaatgacggattaattagtctcaaaagattcgtctcgcggtttctaggcgagttatgaaattagttttctcattcgtatccaaaacccccttccgacatccggttaaacgtccgatgtgacacccaaaaattttcttttccctaactaaacaggccctcagccttatggtaaattcagatattgacagctcttgccaataaaatctcaattgtttcatttagtcagttgatagtttgaagacacaatcatcaaaatgtgccaagctaatttttcaaagagttttgcacaaatttagttttgaatgtgtatcattttcctttttattttcttatcaaggaaaagaaaataaacagtgtctctgatgttgacgtggcaggcgcgtcgagccctgcgcgcgctccgcgggctggtgcggctgcaggcgctggtgcgcggtcaccaggtgcggcgccaggtccacctcaccatgcgctgcatgcaggcgctcgtccgcgcccaggcccgcgtccgcgcccgccgcctcatcaccgaccacatccacgccggcgtcgccccgctccgcctcccgccccttcctcccgccaccgccgccgccacctacagctcccggcgacgggaaggcggatactcgtggcatcctctccgcaacaattcgtaccacgctcagctcggcgagcgagacgagagcgacgacgacgtcgacggcgacggcggcaaggttggcgagcacgcgcggcagcagcagcagcggcaacgaggcaacgacgtcaggagcaggagccctttccggagctgggacggcagcagccgcaccccggaggaagacagggccgagggcgtgcgccggcacgacgccgccgctcgccgcgagcgcgcgcgcgcctacgcctacggctaccagcaggtgcgcgctcccacgcctaccgtggatgtctcgactactagtacttgacgagcaacgttttactgaccatgatctagcagagacaatggcaggagaaggccggcggcttccaatggctggacagatggatggcagcgcaagcgcagcagcacgcgccggagcccgacaagagccgccgcagagccgccctgacggccgccgccgacggcaccaccatgcccgagaggacggtcgagatggacacgacgtcgtaccggagcccgctcaactcgcactccgccgccgtgcagggccggccgccggctgtcccaggttacatggcggcgacgcaggcggcgcgcgccagggcgcgcacggcgccgccggccaccccggcgcacgccaggagccggtccggcgccgttctcgccggggacacgtcgagctcggggcagagcggcagcggcagcggcggcggcggcgcgcatgtacaaaaaccgtgcgcggtgtacagcccggaatcgagaggcaccggcgactggacgccgccacggctcgccgtcagcagccgcgccaccaggttggtgtacgcttgattcggcgtggcgcgcccatccgcgaaacacaaaatctgatgggatcgtcagggttgtaacttgtgctttgtgtacttcccaaaccatggcagattttggattgctttcttgttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0299200, RefSeq:Os02g0299200