Os02g0301500

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Revision as of 02:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0301500| Description = Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box protein 8)| Version = NM_001053158.1 GI:11544568...")
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Gene Name

Os02g0301500

Description

Similar to ATP-dependent helicase DHX8 (RNA helicase HRH1) (DEAH-box protein 8)

Version

NM_001053158.1 GI:115445686 GeneID:4329095

Length

3141 bp

Definition

Oryza sativa Japonica Group Os02g0301500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:11699436..11702576

Sequence Coding Region

11699437..11700683,11701926..11702319

Expression

GEO Profiles:Os02g0301500

Genome Context

<gbrowseImage1> name=NC_008395:11699436..11702576 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:11699436..11702576 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gatgagaacctttcccagtattctgtaattatgcttgatgaagcgcatgaaaggaccatacacacagatgttctctttggcttgctgaaacagcttattaagcgcagatctgacatgaggcttattgttacttctgctaccctggacgcagagaagttctcagggtattttttcaattgcaacatcttcacaattcctggaaggacgttcccggtagagatactctacaccaaacaaccagaaagtgactatttggatgcagcattgatcaccgtgcttcaaatacacttgactgagccagaaggtgatatcctcctttttttgactggtcaagaggagattgatcatgcttgtcaatgtctttatgagaggatgaaagggctagggaaggatgttcctgagctcataatattgcctgtttatagtgctcttccgagtgaaatgcagtcgaagatctttgacccagctcctccagggaagaggaaggttgttgtggccaccaatatcgctgaagcttctctaaccattgacggcatatattatgtcgtcgatcctggttttgccaaaattaatgtttataattcaaaacaaggactcgattcattggtcatcactccaatctctcaagcatcagcgaagcagagggcagggcgtgctgggcgtactggccctggcaaatgctatcgtctatacactgaaagtgcataccgcaatgaaatgtctcccacaacaatcccagaaattcaaaggattaacttggggtctacagttctcaacatgaaggcgatgggaatcaatgacctattatcctttgatttcatggaccctcctgcacctcaagcacttatatctgcaatggagcaattgtacagcctaggtgctcttgatgaagaagggctccttaccaaactggggaggaaaatggctgaatttccactggatccaccactttcgaagatgcttctagccagcgttgaccttggatgcagtgatgagatactaactattatagctatgatacaaactgggaacattttctataggccaagagaaaaacaggctcaggctgatcaaaagagggccaagtttttccagccagagggggatcatctaactctgcttgctgtatatgaggcgtggaaggcaaaaaacttttcagggccctggtgttttgagaactttgttcaatcaagatccttaaggagagctcaagatgtgaggaagcagcttctcactatcatggacagatataaattggatgttgtctcagctgggaggaacttcacaaaaataaggaaagcaatcactgccggcttctttttccacgctgccaggaaggatccccaggagggatacagaaccttggtagagaaccagccggtgtacatacacccgagcagcgcattgttccagcggcagccagactgggtcatctaccacgaacttgtaatgacgacgaaggagtacatgcgggaggttaccgtgatcgacccgaagtggcttactgagctagccccgagattctacaagtcagcagacccaaccaagatgagcaagaggaagaggcaggagaggattgaacccctgtacgacaggtaccatgagcccaactcctggcgtctcagcaagcgccgagcttga</cdnaseq>

Protein Sequence

<aaseq>DENLSQYSVIMLDEAHERTIHTDVLFGLLKQLIKRRSDMRLIVT SATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEG DILLFLTGQEEIDHACQCLYERMKGLGKDVPELIILPVYSALPSEMQSKIFDPAPPGK RKVVVATNIAEASLTIDGIYYVVDPGFAKINVYNSKQGLDSLVITPISQASAKQRAGR AGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGSTVLNMKAMGINDLLSFDFMDP PAPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEIL TIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFE NFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGRNFTKIRKAITAGFFFHAARKDPQE GYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLTELAPRF YKSADPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA</aaseq>

Gene Sequence

<dnaseqindica>2..1248#2491..2884#cgatgagaacctttcccagtattctgtaattatgcttgatgaagcgcatgaaaggaccatacacacagatgttctctttggcttgctgaaacagcttattaagcgcagatctgacatgaggcttattgttacttctgctaccctggacgcagagaagttctcagggtattttttcaattgcaacatcttcacaattcctggaaggacgttcccggtagagatactctacaccaaacaaccagaaagtgactatttggatgcagcattgatcaccgtgcttcaaatacacttgactgagccagaaggtgatatcctcctttttttgactggtcaagaggagattgatcatgcttgtcaatgtctttatgagaggatgaaagggctagggaaggatgttcctgagctcataatattgcctgtttatagtgctcttccgagtgaaatgcagtcgaagatctttgacccagctcctccagggaagaggaaggttgttgtggccaccaatatcgctgaagcttctctaaccattgacggcatatattatgtcgtcgatcctggttttgccaaaattaatgtttataattcaaaacaaggactcgattcattggtcatcactccaatctctcaagcatcagcgaagcagagggcagggcgtgctgggcgtactggccctggcaaatgctatcgtctatacactgaaagtgcataccgcaatgaaatgtctcccacaacaatcccagaaattcaaaggattaacttggggtctacagttctcaacatgaaggcgatgggaatcaatgacctattatcctttgatttcatggaccctcctgcacctcaagcacttatatctgcaatggagcaattgtacagcctaggtgctcttgatgaagaagggctccttaccaaactggggaggaaaatggctgaatttccactggatccaccactttcgaagatgcttctagccagcgttgaccttggatgcagtgatgagatactaactattatagctatgatacaaactgggaacattttctataggccaagagaaaaacaggctcaggctgatcaaaagagggccaagtttttccagccagagggggatcatctaactctgcttgctgtatatgaggcgtggaaggcaaaaaacttttcagggccctggtgttttgagaactttgttcaatcaagatccttaaggagagctcaagatgtgaggaagcagcttctcactatcatggacaggtaactatttaattttcagtggtttgaactaaaatcctctgtgaagatatatattctttgacttgtattcttgttagtttgccatgtacataggtcaatttcttccaagcttggtttgccttcagattactctgagttccttgctctccccatttgatttagattattgagcggattaaatcgaatattttgggaaataaacttagcaaatagcttaaaacaagtggtcaatgcagtacaagaaagtttttgaggcaatgtattttcttttgaagcatagagcaaataatccgtttcaataatccaacgtattatctgaaaaagaacattttatattattgtcatcaattgcctggtttattacgttagcattcttcatgtcttaacacagttgagcttttctgatttttagttaaaagaaaagcatagtagtcaaaaaaagaacatgctgcaattacttcaaaaaagggagtagggaggtgatgataacttgacctacccaaggcccaagtttagatattttttactacaatttatgtagctgggtgtttgttatttgtaaaataatagaaaaatagtaatctttgcatatgagtatatgtaggtggtcagttcttctataataatgtatacaagttctagatttgaggataacttgttgcatttatattttattttagacttgtagtttatttagttggggctcattgcaaattgaaacacctagtgcatatgcaattatgcagtgcattgtgacaagatgtatactaaagacataaccataaaaaaagcaaagtatgcatggtaatttgtattacactttatttcaacaatatgggagttagatctgaaactgggttgcataattaacagtttgccccgcagtatttacttgataccatgttattattcatcagggttttgcatagtttacagtttgcccccacagtatttacttgattgtgtgtaattcatcaaatggggttgatatattagtttctgtggatggactatactattcgatccctttgttgttgttttagaaataaaaatctcaagagaaattattagagaattgcttcatttgttacctgctctgtgatcgaggtcttttgaccattctagttttaatagcatattccacctttttagatgagctgttatgtcttatgagtttttcttttaaacgagggcatcttatgagttccatcgttatactaacaaattccgtgatttttgcagatataaattggatgttgtctcagctgggaggaacttcacaaaaataaggaaagcaatcactgccggcttctttttccacgctgccaggaaggatccccaggagggatacagaaccttggtagagaaccagccggtgtacatacacccgagcagcgcattgttccagcggcagccagactgggtcatctaccacgaacttgtaatgacgacgaaggagtacatgcgggaggttaccgtgatcgacccgaagtggcttactgagctagccccgagattctacaagtcagcagacccaaccaagatgagcaagaggaagaggcaggagaggattgaacccctgtacgacaggtaccatgagcccaactcctggcgtctcagcaagcgccgagcttgatggctctcacctgtacaatgttctgcatgttctgcggcgctggttcgatcaaattccaaactggaaattttggtgtagctgtaaatattaatgtgactgttgtctcagctgtgtttcttacatgactgttgttagctgagcaggtattgacacatgtaatgtagctggactctgtcctttgttgagacagttcccatgaatttttccgtttgcctaaatgccaacgttcatcattaagtgatgcaattttctgagat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0301500, RefSeq:Os02g0301500