Os02g0312500

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Revision as of 02:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0312500| Description = Optic atrophy 3 family protein| Version = NM_001053187.1 GI:115445744 GeneID:4329131| Length = 3765 bp| Definition ...")
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Gene Name

Os02g0312500

Description

Optic atrophy 3 family protein

Version

NM_001053187.1 GI:115445744 GeneID:4329131

Length

3765 bp

Definition

Oryza sativa Japonica Group Os02g0312500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12349247..12353011

Sequence Coding Region

12349458..12349586,12350189..12350323,12350716..12350802,12352436..12352585

Expression

GEO Profiles:Os02g0312500

Genome Context

<gbrowseImage1> name=NC_008395:12349247..12353011 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:12349247..12353011 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatccttccgctggcgaagctggggacgctggcgctgaagacgatgtcgaagccgatcgccatccgcctcaagacggaggccagccgccaccctcagttccgccagctcatcatcaacctcgcccagacaaatcatcgggtctccacaaatatccagagaagaatatatggccattcaactaaggttgagattcggcctttgaacgaggagaaagctgttcaagctgctgctgatcttattggggagctctttgttttctcggttgctggggctgctgtaatctttgaggtgcaaagaagcgcaaggtccgaggcccgaaaagaggaggctcgtagaaacgaagttgaggcgttgaggcaaaaggaggatcagttggctcgggagatagagattgtgaagcagaaacttggcgagatagagcgccaagctaattctcgaggtctctctggagttcttttcagaagcagcagtgctccagaccaaacaaaggcctcatga</cdnaseq>

Protein Sequence

<aaseq>MILPLAKLGTLALKTMSKPIAIRLKTEASRHPQFRQLIINLAQT NHRVSTNIQRRIYGHSTKVEIRPLNEEKAVQAAADLIGELFVFSVAGAAVIFEVQRSA RSEARKEEARRNEVEALRQKEDQLAREIEIVKQKLGEIERQANSRGLSGVLFRSSSAP DQTKAS</aaseq>

Gene Sequence

<dnaseqindica>212..340#943..1077#1470..1556#3190..3339#gtgctggaaatttcctaatatcccctacttccgatctcaacgccggcatcgtctcgccgtgaactcgccaagacctccgccgccgccgccgcctcatctcccaagctcctccgcggccgcgtgacgggaagcggagcgggaaaaggaggatccatccgtccggtacacgagctcctcgtcgacgccgccgggggagggagggagggggaggatgatccttccgctggcgaagctggggacgctggcgctgaagacgatgtcgaagccgatcgccatccgcctcaagacggaggccagccgccaccctcagttccgccagctcatcatcaacctcgcccaggtgacgcgggcccccgcccatctccccctcctctcgtctccccttccccccattttgttcttcgttgtgcgcttggaaatcgtcaggccttgtgaaaatttagcggtagaaatgcagaataggatgtggagaggattttggccgccgagggtttggggtttccccggccttgtgatcgcgtagcgcagttttactaccctccgaggaatgaagggtttcgccgttgtgtgtcaaatctttggctagggtgaatgttctttgattgctgaattctttgtgatatacttgttcttgtttttgagctgctccgcaatatcaggttattttggctagcttgtacattttcttgcggccatttcttgactttgttgattgagatacgcagaatgggattcgttatcagaaaattatgcattgcttccaaatgagaagggtaactgtacttattaatgagaagtctgaatctgaaaagtgcacttttagtaaatatgctagtgatcgaacaattctgctcacaatttgtcgtccctgcatcctcctcagctgttacttctttctttaactacttcaaataacattttggccacgaactggttttgtagacaaatcatcgggtctccacaaatatccagagaagaatatatggccattcaactaaggttgagattcggcctttgaacgaggagaaagctgttcaagctgctgctgatcttattggggagctctttgttttctcggtattcacaatcatgttttcttcttattctttgctgttgtaatttcggctttcgatttttgcttaaattctttaattttcaggtgatgattatcttagtgtcaggcaaaccgtacttttatgtgatttccatttataaaaaactggaaatatcctcgagacaagtctgtttttttgtagaaataaagaatgcataagaacatttagaaaatctagccacatgttacttcaatgcatgtcttttttgtaaagtttgctgattttattggttaaccatcacctatgatcccatgtcaaattatgacaaatgttgccttcctgcatgccttctatatagtttgctgttgttttatttttgccattcactaaacttcagcaacccttgtgtagtaggttgctggggctgctgtaatctttgaggtgcaaagaagcgcaaggtccgaggcccgaaaagaggaggctcgtagaaacgaagttgaggtataagctctggaatgtcaatagttttgtaacttgagatgagttgtgtcttcgcagggtaatggttttctttttgttaacgtccacatatttcatttcagtgactatattcatttatgtatctataatctataaataggagcccccccaaaaaaatcacatagctcattggtatatccaaacaacaaattgtctgatgcagctattcaatcttaggattattctaccaaatgttactaaaaaaattaatcagttcaatggcctgggaataattggggatgaatagctattgtttacattgctgagaatcgtcaggatagctctaatatttcagtgaagtcttgcaagtgataacaaacaaggcaatgcttgggctatatcttggatacagttgtattcttggagtacactccagtataggagttattacattctaaataatgtgtagaaggactgtagcagcgaagtgctctaatattggatgacagcgatataagagacacaaagtgcttacctttattgtctgaagttataaatcagtcaaatgtaagtagactgtcttgtctgaagtcttgtagtaatgattcaattatggaggatagcaactatttgcaacaaataatcatatgtaaacctgtactgcattttcaccaaactgttgctatgaaaaccaaaaatacatttataccaaagctatgctacacaccttgcagtacagtagccctaatgggttgtaaaaggccatagcaagctgcaaccatacagagtgctgcagactttgcctgcagttagtatcaggcactacaccttaattctaaaccagggctattgtagtgttatcatggccttttctgaacattcaataggtatcagatctgtgagcaataatatggcagcaggccaactgttcttttttttcctctaaaattggccatttatagtttttgttgcattgcatattttttgaccaatttacattttgcataaatagtctagaatttgatgtttcagcaatatcacgtcgttgacttgttctttgctgtttattttcattgttatgctttatatcattcaatatggaccagctttgtggattgtctttttcctgtccaagcaagtgacagttaccagacagatctgtttggtgtatgcagaagaggtagtactcttctctctgaaaaggacaagagaacagatagcagtctgaaacactggaaatatgccttaggttgtggctttgtgagaaccagagatgaatgaaacagaatcaagtccaagagtaatgtattgctatggtatcccataaatcccaagtggaaatgaaattcctatatgtaccatatgaaactgaagtctctgcaacaaaaactcactatcaataggtgttgaccagagaacatttgatgtcaacattatcttcaatgtgcatgagtggctctggttagacaatgcattgcagtagcatgtattcataaatcatctggcctttgactccagttgttaatgtgctttgccattatgtgaccgtatatcttcagtcttgctgttggtgatgttattgacttgtgttgctattttttgtcgattatttctatcattttatgagtttgaaaaaaaaacatttattttgtaggcgttgaggcaaaaggaggatcagttggctcgggagatagagattgtgaagcagaaacttggcgagatagagcgccaagctaattctcgaggtctctctggagttcttttcagaagcagcagtgctccagaccaaacaaaggcctcatgagtttgattaactaggacaaaggcaagacttcaatggcagcatcacaaccaagttaatcgattactgtcctgcattgcttgtgatattgcacatggatgtgcagatttttgaagcacacatcttgtagcttgtgtttttcctgccaatcaccatgggaatgggcccatagcttgaggtttcgaacaacttgtcgtatttgaggctattttaactcgaaagcgttggagagcagttccaagaagggaacatctggcaagtgcaaagcagaattgtgctatgtgtgtgttgtctggcaattctcgcgagttgtcaacttgcatcataagataactgtatgccatgaacttgtcaacatgggaagcagattgctgccaaagtacttctggtttgtaactcgatcatgttcatatcagtgtattacaaggt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0312500, RefSeq:Os02g0312500