Os02g0313500

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Revision as of 02:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0313500| Description = CHCH domain containing protein| Version = NM_001053192.1 GI:115445754 GeneID:4329136| Length = 8323 bp| Definition ...")
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Gene Name

Os02g0313500

Description

CHCH domain containing protein

Version

NM_001053192.1 GI:115445754 GeneID:4329136

Length

8323 bp

Definition

Oryza sativa Japonica Group Os02g0313500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12411692..12420014

Sequence Coding Region

12412160..12412169,12412359..12412447,12412524..12412621,12412988..12413111

Expression

GEO Profiles:Os02g0313500

Genome Context

<gbrowseImage1> name=NC_008395:12411692..12420014 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:12411692..12420014 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagtgcaggcggtgcgtttggtggaaatcggggcgtgaggcctgtgcctcccgaaaagggagtgttcccactggatcacttgcacgagtgtgacttggagaagaaagattatcttgcgtgccttaaatcaactggatttcagtccgaaaaatgtcggcagttctcgaagaagtacctggaatgtaggatggagagaaacctgatggcaaagcaagatatgtcagagcttgggtttagaagtgaggatgtcatgaacccatcacccaacaaaaaaaacaatctggaaagttctgcaagtggtccaaacgaggaaagatag</cdnaseq>

Protein Sequence

<aaseq>MSAGGAFGGNRGVRPVPPEKGVFPLDHLHECDLEKKDYLACLKS TGFQSEKCRQFSKKYLECRMERNLMAKQDMSELGFRSEDVMNPSPNKKNNLESSASGP NEER</aaseq>

Gene Sequence

<dnaseqindica>469..478#668..756#833..930#1297..1420#gcaagtgcagttttaaagaaaaaaaaagagataaaaggtgagtacttgagagtatcttccccttccctgcgcgtaaaagaaaatctcccgtctcgtctcctccgctacttgcgccatcctcggctgaacaggggagaggcgccgatctccatctggcgagcagagcagggcaggggaggggatcctggtgagcatccacattctatttctgattcatctctctctctctctcccaccgggagtacttctgtctggaatttgctttgcgttaaccctagcttctcttctagatctggaagaagctcttctcttaatttcagagccttaaccttaatacaagtaacagtttgcttgttccccacaaaagtttagggtttcaactgaatccgcatttccccccttggttgctactcatctgggaagttctggtggggcggtttgagcactgagaaagtatcaccattggaaatgagtgcaggtgtgctgatcctgaatttgtcctctattaatattttttttctacattgatttgctctggatgtatgtcacaaccgtgaagaacttatgggttccattaatccattcgtgtactgactgtttcctgcttaatctcccaagttaagtgatgctaatgtgaagttcggaataactttgtgggctctcgcaggcggtgcgtttggtggaaatcggggcgtgaggcctgtgcctcccgaaaagggagtgttcccactggatcacttgcacgagtgtgacttggtaagtttgcacaccttttttgccccgatttttttggtgtcataacttgtcatgtgacaactgcacgttcaaacaggagaagaaagattatcttgcgtgccttaaatcaactggatttcagtccgaaaaatgtcggcagttctcgaagaagtacctggaatgtaggatggagaggtgatactttgacatattaatttcagatccatgacttactcttaccatacaatggttagctcaatctgttttccatgtcttgaaggtttctctttatttcgaggcaaaaggtcttgtgggggatattttgatgcttgtagtagccaactttaagagaaatcaaacagttctattaatacctgaaattcttgctgtgttaagagtgcttaagaacttcgatattccaacctacctattcaggctcacaagtcgaaacattgaagagtttgtttttcagttgtaggtttaatgctgctgtttccattataaattcaagacatgctattcttgtgtattatatctttgtgaaaaatatctttgttccagaaacctgatggcaaagcaagatatgtcagagcttgggtttagaagtgaggatgtcatgaacccatcacccaacaaaaaaaacaatctggaaagttctgcaagtggtccaaacgaggaaagatagctgtttgattttgaggtagctttggttctaatgcaaggccatcatccaggaaaccagtcaagtctaattataaagaagagaataaatagcaagaagatgaagggaacaaacactatgaaatgttgaaatttcctcttcaattgttaggattgttagaaccatgtgacacatgcttgcaagtaatttcttgtgaatgttcatcgtgaactcataaaactgtttgtttccatttctagtaaggcagcagtaaccaccagttttgtttttagattatagctgcatcactttcggaagagcaacttgatagaaaatcgctgatatctatactcatttaaaaggactccaatggtggtggcggtgtatctgccaccccacctatttccattgtagttttacatattaccccttgaacttcttaagatcacataacatctaaatctaaatggttagctacatataaaattaaacggaagtgagtattctctataaaaaaggtggcaatatacttcatgaaagatatgcttttatttattttggaaatattatgatatattttcttttagcgtagcaaagcacgaacatttagctagtacctacaaaagttctgccagtttgttccaaattttgttcttaagaactaagaagcagatactataatctgcgtgcatttggtggacgtatgaaggcgttacttcactatcaaatttaccttttgaaatcctttcagtttattagccggatcacgaacttgccctgttcatgctaggtccttaaactccaatatttattaattgaatctccaaatttgataaattgctcttcttgagctatcacattgtttgggctaatatgatctccaaagaaaagtaggtgggtttattagtgcagtactccctctgtcccaaaatataaggaattttggagggatgtgacatattctagtactatgaatctaaacaggctccctgtccagattcgtagtactaggatatatcatatccctccaaaatcccttatattatgggacggagggagtatgagtcaaaagtcagccaaaacatggaattatgccgtgttgcttgtcctcagatcatcgtcccatcccagccttgttttaaaacctttcaaaaatagcattccgtgttccttgatcctgtacctcgactcataagtgaggaactttggtgacatgctcaaatctaaaaaatgtgcttgccttttgtgtcatgagtcaaattattagcggtagtttttgtttggtattgctgttggtactcaatgatcaacgaccattttagttgagccatcatgaatgtatacttttgttgtagtgatcaccaagctataccttagaaaattccttatgttcccctgagtctttgctccatcctttccatgccattgagctttgtcttgtcttgcatgccctagattttttctaatcccctctatacacattgggtgagttgcttcataaaaagcatcattctcaaggtgaaaattgtttcagttctaaaaaaatagaaggggatataattatatgaccccaaatttgaaatataaaaattataatttgaaatgagtttcaatcaaatttgatgatttttttggagagtagattcacttatctccatggaaattttttccaatttggttgaagttgattaaaaagatactccctctgtcccaaaatatagcaatctagtactggatcgaacataaacttgtactacaaatatggacaaacctcctgtcctgtccagatttatagtactattaggttgtgtattcgatactaggttgctatattttgggacggagggagtatttgttttggtgtcgaagaagaggagaaatagaaaaatggtggtttgtgtaatttatgtattgaaatttcatcaaattttgtttcaatacatttgaaaatttcgaaattgaatttcaaattttgggtcaaacaattttgtgtcattcattttttttataaaggttttaacctcaatatttatatgaagctagatatgtttgagcgaggtgcaatatagatattttgtaaaaatcgaatagtaacaaaatgagttgaggtgattagtacgtaaactcggtggtatctaggaataaagaaagaatcaggagcatgtatagaaggatggagtgaagacttaggcacacaaggaattttcttatacattttgcaagagcagcattatgtttggctcatgtctcatattatagctatggtgaccgctcactgcaaaacaagacaagttattcttttcttggattgtatatttaaaagcattgccttgcccaaaaagatccaaaatcataatgtccattaggttggttgtttgtcatttctattaaataaaatatagatacatccaatttattcaaatgcaatgtatcatgtggatatatatgaagtcgaaagatgcaacaaactctcttgcacatgttcgttattcatagagaatattgttgaatcaccccttgcttttttctgaaaacaatgtagtctattcatctttgtcttgggaagtattaaaaagttaataacaatatattttttttgtctatcacttcttcttttgcaaagagaagtacaactgattggttttttataagctattctagttaacatcacgtagtgtttggaatgttttaagaccttaccaaccaaaagtatccacaaataaaaataacatgtactccctccgtcccataatataagggatttcgggatggggcgcacactggtgcgtgtgtgtttttccacatgaaccactagtttctgggttcttccccttgcttccgaaaccgtcacaccaaacaccattattttatatggaacacattaaattccttcctagaaaagggaacccaaaactgaataaatacgccaacggagctagccatggggagcataagtttcatttgccatgtgagtgcccgtgagtttttccctttctacaattcatcttccatagaaactgtggtggatggatctcaagaggagagatgaaggagctgaagaaagctttgtcaaaccactgcaacttaaggtgaaggattaccctttacttggagtccatatctcggaatgccagatctatgacctagagaaccacatgatctgttaccaggtgagcaatctctttagcttctatggttcactatggatctgtttggtggtttttattccattcaatattttccctactgctatacctcagaaaagaagagatttcacaatgattagctctcagcacaagaggaggccatgtgaaaataaatactgtcgtgagtacctggtgaacatgtacgcaatttatcccctttttttattggtgtaatttctcttatgtctttttggtaattatctgtgtgtttcagcaacataagaatctctgagcatcttgctctgctctccatttgttttttatctgttcagatgcaaccagagtgcagaaggggtggcgcagaaggtctggaacttctccaaatgcaggggcatgtgtagttaccgtttatacaggtaagccatgtgaagaacatgcatgccatggtagattataattttaaggttagatacttagatttgatccttttaatttggtagaaagaagaattgggagatgctggcagagatactggatcatgctgtcaatacgttgggttacacttccgtccataaattgttgaacaagggttcatatgtggtggctgttgcagagatgttgacatcaacccctctagaggtgaagtccaaatgatattttcttcacaagtaacacaaccttctggattgtatatttatttttttagaacacgcaggagatctgtgtatcatttcattaagatagagggaaaatgattgcatatttaaaggcattgccaagtccaaagaaacaaatcataatatctagttggtggattatttgtcacttctactaaattaattatagatacatccaatttgttaaaagcagtgtatcctgtagatatatatttgtagtcaaaagatgcaacaagctctctttcgcatgttgtttattcataaagcccatagcatcgttgcaaacttgcattgccgcttgctttttttatcatatatagtctattaatctttctcttgggaagtatcaaaggtgtaaacttaaaattttacttattttattgtttgccccaaagaagaaatagaaccaattaatttataagctatgctaggcatgaaaacattacattgtgtagttcttttcgaaaaggagcatcatcttcttttagaatgatttaagacctgaccaattaaggagatacaaaaatagaaatcacatgtagattggttgctgtcacatttaatgatagaaataagttagataaatccagttcttttgaaagcacttcaatcctatagatacaatagaaataatatagaagattgcctggtcgcagtactcacacttctaagcgtgttagatgatggttgaaccacttcaccgtaaaatatatagccatggctctaggcctttccacactccaaaactgaaaagagatagtttaggagggatttactagttacaaattttaggagggatttaaatcatttacatctgttacaagcagcttaccatttatgcttccagatttgcacattaaatgtatttgacaaaaaagatttgtacattaaatgccttcccttttcacacctatgaaattaaatatatacacattcttggaacaagttgtgaacaaattcatttgactttacatcacagatctgggatctctgttttgcccaagcactttcttccatggaaattgtgatggctggcaaggcttgccaccaggtaaatgacctaagttgtctttccttttgctattctattgttgtttgggtcacatggtgtatgtcttaacgtttgatttctccgtttgatccacagtgccgtcaaatgaaacgaaactttgcagtggcatgcacgcaggttaagaagggggtatgcccaataaaatactgccataggtgccttcttaagaggtaagaattttcttccctctattttcttggcaggtgagattttccttcatagttgaagacactcaccatctccacagtggaggaaactgattttctaagaatatatcaatctacttggctttggtttgtgactaattcttttaggtatgatgagaatgatgaagaagtgggacagatggaagcctggatctgcccaaaatgtagaggcatctgcaactgcagctgctgcaggtaagccatcagaagctgatatggaatggtaatcaatagctgcagcagcttactttgtttggcatggcagaaggaagaaaggacaacaacccacagggagattggtccacactgccaagaaaggagaacaaggggctgccgatgaggtattatatttgtttttatttggcaatacatattatatttaactgtttgtcaattctttgttgtatgctgctggttcattatggttaacaattgtaatgaacaagcaggaaagcacaggtagatcccttcggatagagaattctgttgaagaattgctggtcgagggggatcaaataaagctgaagggcaacattgtggtgaataaaaattttgatggtgaaagctccttggctaaagacaaaaatggatctatattgggctataatagcgcagtttcttcacccaataaaaaagtgcttccaaggggtagtctggtcactaacattctaggtgcagatctggaggtgaaagatgttggaccagcaattcagttatacgagttctgcaattcatttggcgaggtaattgaaccaacaaccttattaatagcatggcgacacatgtcttattatgacaacatcttgctagcatacacagacagttgaattaatgtaatgtttcttagtaaaagaaatctatgtgactccaactagacacatttttgcttctcacctaatagataatatcatggactccatatttttcacttcactatcctagttatataaaaatacaatacatcttaaagaatcggatttcttatttgtcctaactctttctttgtatgcgcaaatatccaacaattccatgtatactaattcgaaccggttggctcaagccgaaattctgttcattgaattaatggctgtctgtcaccaattgatttgcagttaccaaagttatctccatagaaagttttcttgtttctattatataatactgtaagctcctttatcttctataaattatattttgtattctaaatggaatgacatataggatgattttgatgcagattttccagataaggaagggccaacctgaacaaattctacaagacatagcaagagatcaagaggttgaaatagtacccgagcttattgctggctttcacaaaaacttgctatcggtcatcaaagaagacagaggggagaagtaaataccatccgaatcaaaatttccttcattttgttcaaatttttggtagtaaatcgataaaaatgggttattttgtttccaggaattcaatctacataacaaatggagatgcatggttaaatgatttaggtgcatatatcaatgaattggcatttatgtcaaaggaattgcatcttgaatttgtaaacaagggaacattgggatacaacaagctgagtccttgtaagctgcatgtacttaatttactttgcgatgaggccctctctaccgtgtaagtgcttctttaccacatttactggaatgattcaatttattatagtttatattgaattgttaactgtgtcttaacctttgaacagaaagttaagaaaattgattgaagaacaaaatggaagggcagctgaaagaaggaacgatgccaaagcaaaactgcgggctgcaaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0313500, RefSeq:Os02g0313500