Os02g0314600

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Revision as of 02:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0314600| Description = Peptidase A1, pepsin family protein| Version = NM_001053197.1 GI:115445764 GeneID:4329142| Length = 1967 bp| Defini...")
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Gene Name

Os02g0314600

Description

Peptidase A1, pepsin family protein

Version

NM_001053197.1 GI:115445764 GeneID:4329142

Length

1967 bp

Definition

Oryza sativa Japonica Group Os02g0314600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12493427..12495393

Sequence Coding Region

12493560..12495104

Expression

GEO Profiles:Os02g0314600

Genome Context

<gbrowseImage1> name=NC_008395:12493427..12495393 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:12493427..12495393 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacgcggctcgccgtgcgctctctggtggtcttgttcttgactgtggcctcgccgtttcttgttgctggtggtggtggcgccaagctcaacgcgtcgtcgtcgtcgtcgccgctgtacgggatcgagttcccgccgttcaacgccggcgtcgcggatggcggatgcgacgggaagctgatggtgcaggggatggaggaggtgagccggtccccttcgctgaagctgcatatgacccaccggtccgccgccgaggccgccgcggcgggcaggacgaggaaggagtcgttcttggattccgcggggaaggacgttgcccggatccacacgatgctcaggagggtggccggagcaggcggaggtagggcagcgacgaattcgacgccgcggcgcgcgctggcagagcggattgtggcgacggtggagtccggcgtcgcggtcgggtccggggagtacttggtggatctctacgtcggtacgccgccgcggcggttccagatgatcatggacaccggcagcgacctcaactggctgcagtgcgcgccctgcctcgattgcttcgagcagcgcggcccggtgttcgacccggcggcctccctttcctaccgcaacgtcacctgcggcgacccccgctgcggcctcgtcgcgccgccgacggcgcccagggcgtgccgccgcccgcactccgacccgtgcccgtactactactggtacggcgaccagtcgaacaccaccggcgacctcgccctcgaggccttcaccgtcaacctcaccgcccccggcgcgtcccggcgcgtcgacgacgtggtgttcggctgcggccactcgaaccgcggcctcttccacggggccgcggggctgctcggcctcggccgcggcgccctctccttcgcgtcccagctccgcgccgtgtacggccacgccttctcctactgcctcgtcgaccacggcagcagcgtcgggagcaagatcgtgttcggcgacgacgacgcgctgctcggccacccgcggctcaactacacggcgttcgcgccgtccgcggcggcggcggcggacacattctactacgtccagctcaagggcgtcctcgtcggcggcgagaagctcaacatctcgccgtccacgtgggacgtcggcaaggacgggtccggcggcacgatcatcgactccggcacgacgctgagctacttcgcggagccggcgtacgaggtgatccggcgggcgttcgtggagcgaatggacaaggcgtaccctctcgtcgccgacttcccggtgctgagcccgtgctacaacgtgtccggcgtggagagggtggaggtgccggagttctccctcctgttcgccgacggcgccgtctgggacttcccggcggagaactacttcgtccgcctcgaccccgacggcatcatgtgcctcgccgtcctcggcacgccgcgctccgccatgtccatcatcggcaacttccagcagcagaacttccacgtcctctacgacctgcagaacaaccgcctcggctttgcgccgcggcggtgcgccgaggtgtaa</cdnaseq>

Protein Sequence

<aaseq>MTRLAVRSLVVLFLTVASPFLVAGGGGAKLNASSSSSPLYGIEF PPFNAGVADGGCDGKLMVQGMEEVSRSPSLKLHMTHRSAAEAAAAGRTRKESFLDSAG KDVARIHTMLRRVAGAGGGRAATNSTPRRALAERIVATVESGVAVGSGEYLVDLYVGT PPRRFQMIMDTGSDLNWLQCAPCLDCFEQRGPVFDPAASLSYRNVTCGDPRCGLVAPP TAPRACRRPHSDPCPYYYWYGDQSNTTGDLALEAFTVNLTAPGASRRVDDVVFGCGHS NRGLFHGAAGLLGLGRGALSFASQLRAVYGHAFSYCLVDHGSSVGSKIVFGDDDALLG HPRLNYTAFAPSAAAAADTFYYVQLKGVLVGGEKLNISPSTWDVGKDGSGGTIIDSGT TLSYFAEPAYEVIRRAFVERMDKAYPLVADFPVLSPCYNVSGVERVEVPEFSLLFADG AVWDFPAENYFVRLDPDGIMCLAVLGTPRSAMSIIGNFQQQNFHVLYDLQNNRLGFAP RRCAEV</aaseq>

Gene Sequence

<dnaseqindica>134..1678#cctccaacctctctccccacctcgcgcctttttcgctattttcctctctctcccagcgcgcggccaccgccctcttcttcttcctgttcttccaccaccacatcggcgccgcctgtctcatgtgggcttagccatgacgcggctcgccgtgcgctctctggtggtcttgttcttgactgtggcctcgccgtttcttgttgctggtggtggtggcgccaagctcaacgcgtcgtcgtcgtcgtcgccgctgtacgggatcgagttcccgccgttcaacgccggcgtcgcggatggcggatgcgacgggaagctgatggtgcaggggatggaggaggtgagccggtccccttcgctgaagctgcatatgacccaccggtccgccgccgaggccgccgcggcgggcaggacgaggaaggagtcgttcttggattccgcggggaaggacgttgcccggatccacacgatgctcaggagggtggccggagcaggcggaggtagggcagcgacgaattcgacgccgcggcgcgcgctggcagagcggattgtggcgacggtggagtccggcgtcgcggtcgggtccggggagtacttggtggatctctacgtcggtacgccgccgcggcggttccagatgatcatggacaccggcagcgacctcaactggctgcagtgcgcgccctgcctcgattgcttcgagcagcgcggcccggtgttcgacccggcggcctccctttcctaccgcaacgtcacctgcggcgacccccgctgcggcctcgtcgcgccgccgacggcgcccagggcgtgccgccgcccgcactccgacccgtgcccgtactactactggtacggcgaccagtcgaacaccaccggcgacctcgccctcgaggccttcaccgtcaacctcaccgcccccggcgcgtcccggcgcgtcgacgacgtggtgttcggctgcggccactcgaaccgcggcctcttccacggggccgcggggctgctcggcctcggccgcggcgccctctccttcgcgtcccagctccgcgccgtgtacggccacgccttctcctactgcctcgtcgaccacggcagcagcgtcgggagcaagatcgtgttcggcgacgacgacgcgctgctcggccacccgcggctcaactacacggcgttcgcgccgtccgcggcggcggcggcggacacattctactacgtccagctcaagggcgtcctcgtcggcggcgagaagctcaacatctcgccgtccacgtgggacgtcggcaaggacgggtccggcggcacgatcatcgactccggcacgacgctgagctacttcgcggagccggcgtacgaggtgatccggcgggcgttcgtggagcgaatggacaaggcgtaccctctcgtcgccgacttcccggtgctgagcccgtgctacaacgtgtccggcgtggagagggtggaggtgccggagttctccctcctgttcgccgacggcgccgtctgggacttcccggcggagaactacttcgtccgcctcgaccccgacggcatcatgtgcctcgccgtcctcggcacgccgcgctccgccatgtccatcatcggcaacttccagcagcagaacttccacgtcctctacgacctgcagaacaaccgcctcggctttgcgccgcggcggtgcgccgaggtgtaagccggcgccggcgccggcgccggccacgagaggatccaccaatttgaaggtcctcattttgatcgaattcgggtttaggtgtggccaaatttggggcaaatttgggtgtagaaattttgggggcggaaattaaaggtcaggaggagggggttgacacgcaaagttgtatgtagcacaaaggtttcgaaatctccaagtaacagagatttttttaggaataattaggaatacttttttaccaaaaagattgcagtttgtatacagattttggttcaaaacatttcgcaag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0314600, RefSeq:Os02g0314600