Os02g0315600

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Revision as of 02:26, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0315600| Description = Helix-loop-helix DNA-binding domain containing protein| Version = NM_001053199.1 GI:115445768 GeneID:4329144| Length...")
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Gene Name

Os02g0315600

Description

Helix-loop-helix DNA-binding domain containing protein

Version

NM_001053199.1 GI:115445768 GeneID:4329144

Length

3353 bp

Definition

Oryza sativa Japonica Group Os02g0315600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12532753..12536105

Sequence Coding Region

12533425..12534189

Expression

GEO Profiles:Os02g0315600

Genome Context

<gbrowseImage1> name=NC_008395:12532753..12536105 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:12532753..12536105 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcagggagaccacgggtactacggcgggagggactcgccgccgcaggggtacggctacggcggcggctacggctacggaggcgggtatggctacgacgccggtgggtactactccggcggcggcggcggctacccgtcggctggggcggcggcggcggcgtacgaggacccgatggtcgggaggaggacgcacgacttcccggcgccgatgaacgagctggagttccagccgtcggccacgtgccccaagaactacgtcatcttcgaccagacgtgcaccaagagccgggtcatgttccacccctcgctggcgcacaagttcggcggcgggtcgtcggcgtacgacaacaacgtgtacggcggcggcggagcgcacgacgccgccaagggcgcgtacagggacagcgtcggctacgacgacgacgacagctgctcggtgcggcagaaggaggacacggacgagatcgacgcgctgctgagctcggaggacggcgacgaggacgacgtggtgagcacggggcgcaccccggggtaccgggacggcagctccccggactcgacgtgctcgtccagctacggcggcgggcaggcgaggcccgggcgcaagaaggagcgcatgaagaagatggtgcggacgctcaagggcattatccccggcggcaaccagatggacacgccggccgtgctcgacgaggccgtccggtacctcaagtctctcaaggtcgaggtcaagaagcttggcgtgcgcggctccgacaactga</cdnaseq>

Protein Sequence

<aaseq>MQGDHGYYGGRDSPPQGYGYGGGYGYGGGYGYDAGGYYSGGGGG YPSAGAAAAAYEDPMVGRRTHDFPAPMNELEFQPSATCPKNYVIFDQTCTKSRVMFHP SLAHKFGGGSSAYDNNVYGGGGAHDAAKGAYRDSVGYDDDDSCSVRQKEDTDEIDALL SSEDGDEDDVVSTGRTPGYRDGSSPDSTCSSSYGGGQARPGRKKERMKKMVRTLKGII PGGNQMDTPAVLDEAVRYLKSLKVEVKKLGVRGSDN</aaseq>

Gene Sequence

<dnaseqindica>1917..2681#cttcgattcattcctcacgcacacacactctactactagtatgagtagtgaggagtagtgagtagtatcatctctctctgtctgtatcttcacctgtatctactcaaaaggagtgaaagggaataaaatagattggggggcacggtgagccggcctaaagactcccagtgaaaaaaaacccagacccttttataaaccctgtgcctgcctcctcgccaattcgccgttgcaacaaaccaaaccttagctcctctcgctttggcttctcaccccgcacagccaactcttcccgtccatctcaatctccactgataatcgagacacaggccatgccgtgggtgcgcttcctcgtccggttggtcgtcttcttccgcgtcatcgtgtgagtagcgctcttttcttcccatcacccatggctgcatgcagctcttgttagacatttgacgcgcgccattagtgcaatgaatagctaaaacgatcgatcgtgtttcaatttacaggtgagagcaagctaaagctactcgatccgtcgatcggccggcggtgactgactgagaatgtgcattggtttccaagggagcaggaggagtagcagcgagacgagcgccgccgacgcggtgatgagaagtggcgccatcgcgtactaccacacgctgaccaaggtttgccaggtgctcgatcatcgcatgtattgcctctctatctcagctccttgattttttttccccctcaattttccctactctgctagagtagttctactctcgttaacgtctctgtttctgtggtgtttaataagtcctgtcttaatttttttttgacgctaagtcctatcttaattgagagagttaatcgcatgcgtgcatatgcatatgcgttggggggcaaaaagaagaaaacgtttggcatgtcagtgttaaagtggcacgtcctgttagcttgttagtcttctgatgacaacaaccgtaagtcaagtgtcgcacaaggtgatattgcttgtgcagctgtcaagctcgcgtcaaccaaccatatcttatgacctcttactatttgtgatatattaactgactcagccacatttccatggacacactgagtatactgctaaacagaattaattaagttctctgttgtgctgaacctcttgaagacttgttgcgtgtcatgttgttgttaacttggtatggtgttgtgccactgcatgcccactcctggagtagattgcacggcatgccaaacaaacattgcgcccgatcacgcgcgactttgcctagctagctagtgcattttgcttgcacgcgctcagtccggatcgcggcgtgcccttcttttcccaaaaaacgctactaaaattaggccgctttccccccttctctccctgcttgtgttcacagcaatagcagctcgggttggcttgggacacttaaaatattggagcagagcagcagcagcagtagtaggcaccactatgaattgcaagttgccttgtcccctgtttgcactctcacgaaaccgttagttctgtgcacatctttccgggcatgccccaccttgtgtggacaacagtatgttgtatgcaatgtgtgtgtggggtaggccaaagttggtggtacttgcaaacaaaaagtcgctttaatctcgcaccagttgcttgaccactacaggaaccgagatgcgttgccattttgcctattctgatgatgccatgatctggggtatatttctgatgtgttgttttggatttgtgatcgtgcaggccgagtacttccgtcaccttctcaagcccgtgacgtaggttgaccagtacataatcctcctcccttcttcacccgacgagagagctagctgcgcagcttctctcacaaggaaaaaaacagaggagacaaacagagtttggaagttaagagcagaagaagatgcagggagaccacgggtactacggcgggagggactcgccgccgcaggggtacggctacggcggcggctacggctacggaggcgggtatggctacgacgccggtgggtactactccggcggcggcggcggctacccgtcggctggggcggcggcggcggcgtacgaggacccgatggtcgggaggaggacgcacgacttcccggcgccgatgaacgagctggagttccagccgtcggccacgtgccccaagaactacgtcatcttcgaccagacgtgcaccaagagccgggtcatgttccacccctcgctggcgcacaagttcggcggcgggtcgtcggcgtacgacaacaacgtgtacggcggcggcggagcgcacgacgccgccaagggcgcgtacagggacagcgtcggctacgacgacgacgacagctgctcggtgcggcagaaggaggacacggacgagatcgacgcgctgctgagctcggaggacggcgacgaggacgacgtggtgagcacggggcgcaccccggggtaccgggacggcagctccccggactcgacgtgctcgtccagctacggcggcgggcaggcgaggcccgggcgcaagaaggagcgcatgaagaagatggtgcggacgctcaagggcattatccccggcggcaaccagatggacacgccggccgtgctcgacgaggccgtccggtacctcaagtctctcaaggtcgaggtcaagaagcttggcgtgcgcggctccgacaactgatcatcatcatctccaacaccggcagaacggaggaaacaaacaaacaaaaaaaaaagagaggcagctgcagcggcagcaacagcaccagcagtcagcagcagcgatcgagtgctactactgacagtacactgcatctgcatgcacgacatgtaccctactccatcatcctccatttctccatgccttgggtcggcattggcatcgccaagctagccatagctagttgatgcccttttcgcagtgccatgatctggccaaactctttttgtgcgctctacttttggctacgggctttatgctccgtccatgatgagagagggagcatgggagggggcagaggagaggcagcgatcatcatcaatgtactactagtactagctagtgctcatttgctttgggtgtactatagtagtagtggagagatgatggatatggattatggagttctagttaggcagaggagaggagagggagaagggcagcattgcaatcgcatatttgcatgctttggctttgtctgctactactcctcttcatttgttgccttgcttgcttttttcctttctgcccctgccatgtggcccccccttcccctgctggatgaattatccattgatgatcccctccttcgttagcttgacgtgttcagttatactggttactgtttctgcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0315600, RefSeq:Os02g0315600