Os02g0320100

From RiceWiki
Revision as of 02:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0320100| Description = Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein| Version = NM_001053218.1 GI:115445806 ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0320100

Description

Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p domain containing protein

Version

NM_001053218.1 GI:115445806 GeneID:4329164

Length

3953 bp

Definition

Oryza sativa Japonica Group Os02g0320100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12787249..12791201

Sequence Coding Region

12788052..12788123,12788259..12788390,12789016..12789251,12789351..12789548,12790023..12790113
,12790466..12790610,12790737..12790855

Expression

GEO Profiles:Os02g0320100

Genome Context

<gbrowseImage1> name=NC_008395:12787249..12791201 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:12787249..12791201 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgacgctaggtccgcccctgaatcgctgccgcccgcgtttctcgagttcctccaggagaatggcttggacccaatgatgtattccatggtcgacaccatcccacgatacataaggctaaaaccaggcatggagccccatattccagagattcagagcgagctgacgtgccatctcaacaaggtttcatggctgccagatttctacgcaattccgcctcaagttcagattgctagctccatggcctatcagcaaggaaagatctatggaattgatgcagcttctggagctgctgtcttagcacttgatgttcaaccaggagaacatgttctggacctctgtgctgccccaggtgcaaagctttgcatgcttgcagatatgcttggaggcagaggttctctgactggcgttgatgttgcaaagcaccgtcttgcggcctgtcgtacgatgttgcagaagtattctctcggagatcgttgtcgtctctttgttgccgatgggacttcattttctatattacctgtgaactctagcttgggtaatggagaaggatcaacttgtcataaggacaatggaagtacattgtcggaatggacttcaaagagatcgtggaaagaccgacaaaagtctaaaaaggcaagaatggcgggttcacctcatctaacatcaacttcagaacctgaactgatatactatggcaaacattcaggattagttggattacgcaaatgtgatgctattcgtccatcagctgatgatgaagcccagacatctggctatgacaaagtcctagttgatgcagaatgtactcatgatggatccataaagcacatccaaaaatttgagttctggggatggaaaaccttagatcgtcgtgtacttgatgcagaaagaactgatgacctgcttcatcttcagttacgccttctcactaatggttttaaattattgaaaactggtggatcactagtatatagtacttgcaggtga</cdnaseq>

Protein Sequence

<aaseq>MADARSAPESLPPAFLEFLQENGLDPMMYSMVDTIPRYIRLKPG MEPHIPEIQSELTCHLNKVSWLPDFYAIPPQVQIASSMAYQQGKIYGIDAASGAAVLA LDVQPGEHVLDLCAAPGAKLCMLADMLGGRGSLTGVDVAKHRLAACRTMLQKYSLGDR CRLFVADGTSFSILPVNSSLGNGEGSTCHKDNGSTLSEWTSKRSWKDRQKSKKARMAG SPHLTSTSEPELIYYGKHSGLVGLRKCDAIRPSADDEAQTSGYDKVLVDAECTHDGSI KHIQKFEFWGWKTLDRRVLDAERTDDLLHLQLRLLTNGFKLLKTGGSLVYSTCR</aaseq>

Gene Sequence

<dnaseqindica>3079..3150#2812..2943#1951..2186#1654..1851#1089..1179#592..736#347..465#agttgtcagtcacgcatcggcgccgccctccggccagcagcgactcgccgacacatcttcaaagagtcccgccgtcgtatgcgtggctcccctccccggcctctcgtctcgtgggaggtctggatcgaccgcttcctccgctcgtcgcggcgaatccaaccaacgccggcgtccctccgcgccgcagcttcctgtgctgaatctcgccgctccccgagtccgggaacgcacggagcgggcgcggcgagcggctggcaccttggttcaaatctcgccgcgaaacttctagtagcaggcagcggtttaaatctcgaatttatccattttggtgttcggctgagcccccatggccgacgctaggtccgcccctgaatcgctgccgcccgcgtttctcgagttcctccaggagaatggcttggacccaatgatgtattccatggtcgacaccatcccacgatacataaggtgaggaggcagcctgagattgattcagagctacttatgctctgatgaatcaccggaaggctttcataattgttattgtcagtttacttgccttgcattgcgttgagtttgctttgtgattccaaggctaaaaccaggcatggagccccatattccagagattcagagcgagctgacgtgccatctcaacaaggtttcatggctgccagatttctacgcaattccgcctcaagttcagattgctagctccatggcctatcagcaaggaaaggtgacaagacattaaaatttacttttgattctgttctttttttacaggccagcgcaaacgcattggattgcataatcggttaatggtatcctagattaactgaatgttatctggtgtttatgcaattttatttttattctatgaagtgtttgccagataatttatcctaggtagaactcttaaaacatcttacttttatgtgcaagagagaaattgtctcaagtactccttagtccttataacactacttgtactgttacaggataaagctgctgtgcaatcatgtcttatcatgtgttcttttatttgctccattgcttcctgctaagacattttaaatacatttggctagatctatggaattgatgcagcttctggagctgctgtcttagcacttgatgttcaaccaggagaacatgttctggacctctgtgctgccccaggtaattaattcaatattgttatatattacatcacaccagtattttatctgtggcagatgtctaccgtgtataacaatggccctttgctagacttgtttttttgcgccacatgtattcagcagtaatggaaatacctagttttctccataaaacacaagagtaattatctttcctgattggttgatctttggggaagtaactgctctctctgcatcgttggattgaaccaaatctgttcagccccaaaccagatttatggattgacacagtctttaagtttgaaatatatgttgaactttattctcaaataggtttgatatagcattgttatattacatatacattgcaaaattggtgatggtcaaactcgaacgccatttttgcatgattgttttgtcataagtctgtagtttctgttagattatttgttagttgtggaattattctgaatgatgtgctcatatcatgtgcaaggtgcaaagctttgcatgcttgcagatatgcttggaggcagaggttctctgactggcgttgatgttgcaaagcaccgtcttgcggcctgtcgtacgatgttgcagaagtattctctcggagatcgttgtcgtctctttgttgccgatgggacttcattttctatattacctgtgaactctagcttgggtaatggagaaggtaatagtttgcctctttaaacagagtaaaatccttgctttctgtcttattgctcatggagcacttgagtagatgcatctggttgcttatctatcacaggatcaacttgtcataaggacaatggaagtacattgtcggaatggacttcaaagagatcgtggaaagaccgacaaaagtctaaaaaggcaagaatggcgggttcacctcatctaacatcaacttcagaacctgaactgatatactatggcaaacattcaggattagttggattacgcaaatgtgatgctattcgtccatcagctgatgatgaagcccagacatctggctatgacaaagtattccacagaaaccttaaacaatactgtcctttctttcttcagtacaatgctgtttttttagtgttactgaaaacaaactaatgatatttttagttttttatctgtgcactttgatcattttaggaaggaaatgtcttgtgatttagtgtgctatcttgaaaagtttgaagacctagccattccaaatgttgcacgcttcaatcatgacataaatctagtgtctcgtttagtcatcaagcactcaatacatcttattgagaactaccatattcccttgtccaataaagtattcatgtttataactttgtgtatgtaacattttgactcttgatagtttcctttctataattaagcagtgcttctgtgtccaccagaaaattaacttgcatgctcaccagagaatcagcttgtgcaaatatttaaagtagtacaattagtagtggagtttcatgtagatgcaaatcaggtctttgaacttctcttaatattgcgttgttactttgtgagagagaaatgaagcactcttcttatgcaacatacttttccagcaggaatatcctttggcagtttatttcacagcttggataatatttttagtttgttatgtttcaaatgcacacaggtcctagttgatgcagaatgtactcatgatggatccataaagcacatccaaaaatttgagttctggggatggaaaaccttagatcgtcgtgtacttgatgcagaaagaactgatgacctgcttcatcttcaggtactactttcagtcttgatgcttgcttgaagggttgacagttggcacccaatcaagctatgtacattttagatataattacttatctcgttagcatgtgagtgcacaatttcatgagtttcatccgttgtgcagttacgccttctcactaatggttttaaattattgaaaactggtggatcactagtatatagtacttgcaggtgagtaatctcttcacatgcaattccaatatttgatgcctcctcaatcgcttcccagctgtgtagtcaccttttcctattgcatttcgtgtcttacttaactactgatggcttgcgttgaaatagcttgacagttgcacaaaatgagaatgtggttcaacagtttctttgcaaacactcttcagcaggtacagaatagccgtgttcctcatttcagtattatgtatatcccttatatttttactttgaagatgaatattgttatttttctcaaatggactgattaaattgattgtggtacttctagtcaggaaatctttagtagtgtacttgttctcacttcttggtgtggttaagtgaaccttacttataacaagattatttagtttgtcttggttcattgaagttgtcaaagttcaacagatctgccctgatgaccttctgggatttcttttgcaaacatgcagagctacaaaagattgattcagctgacagttggccttgcagaagtggcagcatcttcaaaacattgcgatttgatcctgcaacttcacaaacgagtggcctttttgttgccaagttcactaaattacagatttagagcatatctgatcagtctccatgtagttctaaagatgtgcatttaactagtatatgattccatgtgcacgttagatgttcacaagtaactgtatgcttcaaattcccggagccatcactgttatggtttgcgaagcaaagtggtgcaaactgtcagctatgcgaatctaaacttgcaatttggaaggtaaaagcttggtttcagtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0320100, RefSeq:Os02g0320100