Os02g0326700

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Revision as of 02:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0326700| Description = Rhomboid-like protein family protein| Version = NM_001053243.1 GI:115445856 GeneID:4329191| Length = 7232 bp| Defin...")
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Gene Name

Os02g0326700

Description

Rhomboid-like protein family protein

Version

NM_001053243.1 GI:115445856 GeneID:4329191

Length

7232 bp

Definition

Oryza sativa Japonica Group Os02g0326700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:13185596..13192827

Sequence Coding Region

13186439..13186949,13187054..13187168,13188825..13188990,13190179..13190349,13192501..13192581

Expression

GEO Profiles:Os02g0326700

Genome Context

<gbrowseImage1> name=NC_008395:13185596..13192827 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:13185596..13192827 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctggggtcataaaatggaaaatgatgtcatgtgaacaaagtgggaggagaagtgccgaaattgcacgagaatgcttatcactgacacctaatagatacaagtgtcacagctaccaacatattggctatttgggtgactctgcagagggtttcatttgccgtccattgaagtcaaaactaagaagcaaggttggactacatgtggctgcgaaggtacacaataaggacgatgaaggaagctgcagctccagaatttctgatgaggacaacgagacattgtctaatgcgtcgcgaaaaatggaagtaaaccatctgggggcactgagatgctatttttctaaactaaacactgaggacgcccagaagccatattcttttcatcagacgaacaagcagagaactggcccattatccacaaacatagaagaagcaaacatggctactgattatggcgatttcaggaatacgctggaatcattcgagatcaacttcaacagacgaaaaaaaggtacaaagggttatctaaatactgccgtggaggactacacaaattatttgatatttgatgagaagaacttcctggacatgcagcaagatgatcaaacatccagtttctgtttgacaaatttactagctgcgatcaatattgcagttttgttgttcgaaatagcaagtccggtgagaaattctgatattgaaaatctctctctccctttgatgtatggagccaagataaatgacctaatactatcgggggaatggtggagactactaacaccaatgtgtttgcactctgggttcttgcacatagcacttggatgttgggtattacttatctttggacctcgcgtgtctagagcatatggtcaaacgacatttttgctgatgtacatacttgggggagtttgcgggaacttgacaagctatcttcacacgtctgagctaaccgtctgtggcacagacacatcttggggcaacaatttgtggactacttttcggctatttaacctgcccaagtgtgcaggtcgacaatgctgctaa</cdnaseq>

Protein Sequence

<aaseq>MAGVIKWKMMSCEQSGRRSAEIARECLSLTPNRYKCHSYQHIGY LGDSAEGFICRPLKSKLRSKVGLHVAAKVHNKDDEGSCSSRISDEDNETLSNASRKME VNHLGALRCYFSKLNTEDAQKPYSFHQTNKQRTGPLSTNIEEANMATDYGDFRNTLES FEINFNRRKKGTKGYLNTAVEDYTNYLIFDEKNFLDMQQDDQTSSFCLTNLLAAINIA VLLFEIASPVRNSDIENLSLPLMYGAKINDLILSGEWWRLLTPMCLHSGFLHIALGCW VLLIFGPRVSRAYGQTTFLLMYILGGVCGNLTSYLHTSELTVCGTDTSWGNNLWTTFR LFNLPKCAGRQCC</aaseq>

Gene Sequence

<dnaseqindica>844..1354#1459..1573#3230..3395#4584..4754#6906..6986#accggatggccaccacaccacttgcttcctccagctttcgctgccttctgctgctgctagctaggcgtgcgtacgactgttgcacaaagcagctagcgccctctgctgtaaagctgcaggctggtacgtaagtgttccatgcaggctggtacgtaagtgttccgtgcatgaattcgacctttgatttttcagagaacgacgattgcgcatcgatctggcttgtgtgcttaattgctgcttcctggtttcttctctctctcatcaattagttgcggcatgcgcatgtgatttgtttctgctttgttctgacttctgaggagcatacgctgggtagtttatcgatcctacttctgtattttatcgcattaaactcgatcgaatattcaactgcaccagtgcattgatgtatccaattatcaatttttgaccattgactctacaaagttctttttaactatcaaccccacaactgaacgtggtttcaataaataaattcataggttgcaacaagtttctgttatgttactactcatccttgctctagatatttgtgtggttgtaaatatataggcatctctattatttgaaagcttttcatagaaaagtattgcatcttccctgacttcccatatgaacataccctggtggtaattggtacatacaagttttagatttgagatacttggttatttattgtgttctttaatttggacttacagcacatatattcaattgggacccgttgcaacacacggatacgatgctagttagctcaaacaaatgagttggtgttgtgcccttggtatactaacactccaaacacttgaacatttcaggtatctaatggctggggtcataaaatggaaaatgatgtcatgtgaacaaagtgggaggagaagtgccgaaattgcacgagaatgcttatcactgacacctaatagatacaagtgtcacagctaccaacatattggctatttgggtgactctgcagagggtttcatttgccgtccattgaagtcaaaactaagaagcaaggttggactacatgtggctgcgaaggtacacaataaggacgatgaaggaagctgcagctccagaatttctgatgaggacaacgagacattgtctaatgcgtcgcgaaaaatggaagtaaaccatctgggggcactgagatgctatttttctaaactaaacactgaggacgcccagaagccatattcttttcatcagacgaacaagcagagaactggcccattatccacaaacatagaagaagcaaacatggctactgattatggcgatttcaggaatacgctggaatcattcgagatcaacttcaacagacgaaaaaaaggtaacttcagtttactaagaacagaagcatagcgatcacaaacttcacggaaatttttcttcgggaacataagaaacttcatgaaaacagtaatgctgatttaggtacaaagggttatctaaatactgccgtggaggactacacaaattatttgatatttgatgagaagaacttcctggacatgcagcaagatgatcaaacatccagtttctgtttgacgtaagtaccgaaacgatcttgtttttttagagaagggtatttttacccggcctctacatccaaccggatatatacgtccattgaaatagggaacttagccccgcaaacaacccaattcgagatcaaccgaatcgatcttttgtggtttaattttaatattttgttctcaacacaaattgcactatatacacaatattttgcgtcctcccaccgttccaaaataagttgatttctatcattgtacatacatttggttcacaaatcaagaagttttatcctttcaatacccttttactacccaagttactaataccactcacatatttttttcccaatactactacgcaagagagttgtgtatcatttcgttaatagaaggagaaggtgttaaaaaacatgacaaaacaacaagtaaaaaactcacttgcaccacgaaaagaaaaaccccacaagctatcaccagaacgattacacgaccaaaaaaacaaaagacaagaaacctagccgtgatccaaaataaggagagccaaattccatagacgggcttcctctcttgctagtaccaaagaggttgatagtctaggagacactcttgaagacactatagtccagttccaagaatcaccaagctattcaagcccttccttcctgatattgctgtcaaccaaaccattgattccggtccaatatttatcaaaattcacatatgagggttacgacgtaagaaccccaagcaccacttgctcaaagagggaaaccaaacctgtctagcaaataaatacacaagaaacaagaaaattggtcttatcctcttgctcacaaagagggcatttactaggatgcgagaggcgtcgatgtgcttggtggtccgctgtccaacaccaattgtgtgccactaactacatgaataaatgacattttccagggaatcaagatttttagatgtgttcccaagggccaaaataaatagccccttgaaagagagcgtcatatgcagatctggccgaataaactctacttttgtgttaataagggagacttcaatccccttttttcctagtaataactttttcattttttttctgcttgagatatactaactttttcttaggatgctaggaatggatttatgttacgacatagggagtgtagttttctgccaagatacactaacatatgcaattttttttttttggtgaaacaaagggtgcaagttgggattgcaagactactcatagtcttctgatgaaagatacaaatttccttgagctgcatgcaagcatgcaattctctttcttttctggatacaaaatgtgattttgtgaaacttttttactttagtgcgcagggttatgtgccacatgcgaaaatctctgtagttttgtgtaacttggatcataatatttttctagataacggattaaaacccggcctctacatccaaacatatcccatacaactaacatttatgtgtggaagtgcttgagttgttctgtgcttggtggtagtggtagatgaaaggaaggatagggtgtgggcaaaatggacgagacaagagtaatcacttatattttttccatagctatgttgttataactaattcctttgttggcatattttggtctcttgaccctttgaacttgtatatgaatgcagaaatttactagctgcgatcaatattgcagttttgttgttcgaaatagcaagtccggtgagaaattctgatattgaaaatctctctctccctttgatgtatggagccaagataaatgacctaatactatcgggggaatggtggagactactaacaccaatgtgtttggtaagactgctatttttatgctagattatagaatttcaggcttatttgtccttaacatagaaattttcctctctttttgttcctatctattagttttggaagagagaagctgttaacattccaacaatattgttttaagcagaatatgcatttcagatttgcttatacaaggcaagcttcgtgtgcaatgcgcaagagccctgtgagatatataattagagggattacgtggaggattacagacaagacaagagcacaggggatcgcagtatcccaaagagtacacatagatttgctaaaaggattaatagcaagaagaacatgtttgatgattattggatgcaaatctgtagttattgaggtgacatgtggatagtggattaggtaaaggattgggaaatataaatgaatggaggattaggatgaaatggtgagaaaatggatggctaagattaaaacttgctttttggatggtgagggtataaatatatcatatcttaaactcatttgccaaatatgccctgaaaagtactccgtccctaaatatttgacgccattgactttttaaacatgtttgactgttcgtcttatttaaaaaatttaagtaattattaattcttttcctatcatttgattcattgttaaatatacttttaggtaaacatatagttttacatatttcacaaaagtttttgaataagatgaacggtcaaacatgtttaaaaaagtcaacaacgtcaaatatttagggatggagggagtataatctcatgctcagattgcccttataataggtgttcagggagttgagagacatcagatagtaaaatgtaggttcagagaggaaaatgagacaatactgcaatttttaggaccctcactacattttttgtatgttaaggtaaccttgaaatacaaaatcttctactttgtaaccaaaaccgctcaaaactacaatggtcgtggattaagctagatgcttaatcgcatgaaaaaaattataaaaacatgacgggccaactggatttgagtgtaaaaaacactgccaccttagtgaaaaaaatggtggttttatgtcgaatggtgtatttagacgactctgctagttttgggttgtaaagtagacacatgtatgttcaagtaagtatttttctcttctgacttattcttgtgatttgagttttgcagcactctgggttcttgcacatagcacttggatgttgggtattacttatctttggacctcgcgtgtctagagcatatggtcaaacgacatttttgctgatgtacatacttgggggagtttgcgggaacttgacaagctatcttcacacgtctgagctaaccgtctgtggcacagtaagtgacttggtgacctgtaatattaattggaattatcattatttcaatctcaatttcgtctttaagaaataagcacgctttattgggatttgcatctcagatttggttatgtaattgatagctaagaagaaatgatcatatatacatatagctgtggctgccatcaaaattggtttcattatgagactgtcacgaactacatggcaaactagaatatatgaatgtaaatgctaataaattctatatgaaaggaatttgaattgcaaatgtagtgaccatcttgcaaccttcagagaagagtatatatagcttatgtattgcagatccatcataatgaaatggatccatcttattatggtatttcaaatttgtcttgttagagaaaagtcattctagacggcatgtttgtatataatggtgtgtacattaatgctgcttcctaaaactcagaacagggaccagtatttgctttaattggagcatggcttgtctatcaaagccaaaacaaggatgctattgataagaacgtttcagaaactatgttcagccaggctgttgtggcaacaactttaagcttcttaggccagtcacaatggctagtgtcattgcacggctacccaaaatattataccatcttctctcaaatgaaatcttttatgaaacaatccccacagtggaggggtttcactttgacgtttccaagactaagcaaagcatttaattgatacaagttgctgggatcatttgtacccaaaatccggcgcggcgcgggagaatgcggaggtcgcacggcggaggcggacgcaagagatccggtgaatgaaacgaatcggcctcaacgggggtttcactctgttaccgaggacttggaaacgacgctgacgagtttcaccaggatgaaactctttccttctctctcatccccatttcatgcaaataatcattttttattcagtcttacccctattaaatgtgcatgacacaccagtgaaacccccattgtgactggccttattgagcagtttcgggagaatcgacaactggtaaactgattattttttttactagaaaaggatgcaccataagcatatctctaatgacttctgtacaaactcaactacgtaatataaacttttgctaatatgcgccctttctactgtcattttttttggaagtttaaggatattttattaatttcagcatctttgctatttattttctgtaacaatcatgatttttttaagaaactttaagaataattctaaccaaacctgtactggtagatatggctggggaataaaaagctgacaagaaatccaaccaccataattaaaatgctattgtatgaatttgttaaattatccatggcaagcactgactcatgattttagttgtatcgtgtttgttattgccatatgtacaaacaagtaataagtaggtggttgggttgaattatggaatatttttgttcaagcaaatgcacttataagctaaggttatgtatgaaaaatgtatgaaagaaacattttttttatcattctgtccgtcagattccaaattgtgctataaggattacatcttcaagcaaccaccatgacaactgatctctatgtgctcctgcacatcacaaagaaaattttcaagaatttattcatagtgaattataccaatttcattttttttgcataatcatagtcaaacatctaaacgttagtagccagcttctcagaatctggaaaaactggtttcccagcttctggcttctagttcattttctggattctacaattacagcttctcagaatctgtatcaaaagctggattgtttgggggagcttctgattctgggagaagctgcagcagctagaagctcccccaaacaggcccataggcataaaaaaatataggcatggattctgtggaaacttatatttgccattggacagggcataaaaaaatcagcgaaatcctgattaatctcaagtttcagcaatgctaaagtcaatgacaagaaattataaaatattacttttactgcataaataaagcagagcaataaactttatagaatattttacctttagcatattgctgcttttatcaaggatatatatatataccctcaaactaatgtctgttaaactgtaggacacatcttggggcaacaatttgtggactacttttcggctatttaacctgcccaagtgtgcaggtcgacaatgctgctaagaaaggtcaaaaggctgtggttcttgttaggcgacaggccagtccatggaaatccattgccatcttcgtcataagcataattgtgcttgctcttttcgcctttgcttatggaacacaagcctagatttttcacatggttctgtttgcatatatagtaggtatggcatggccatgagatatggaatgtaacataatcaccttttttttttcttcttgggtttaatgaatatacactggcatttatcg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0326700, RefSeq:Os02g0326700