Os02g0327700

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Revision as of 02:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0327700| Description = Protein of unknown function DUF563 family protein| Version = NM_001053247.1 GI:115445864 GeneID:4329195| Length = 42...")
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Gene Name

Os02g0327700

Description

Protein of unknown function DUF563 family protein

Version

NM_001053247.1 GI:115445864 GeneID:4329195

Length

4230 bp

Definition

Oryza sativa Japonica Group Os02g0327700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:13252116..13256345

Sequence Coding Region

13252325..13253505,13255154..13255216,13255317..13255361,13255469..13255564,13255681..13255740
,13255839..13255916,13256038..13256179

Expression

GEO Profiles:Os02g0327700

Genome Context

<gbrowseImage1> name=NC_008395:13252116..13256345 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:13252116..13256345 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggatcccccaagatggccaagagcgcgatgaagcagggcatctggcgccggaggatcggcgcgcccttcgccgccgtcctcgtcgccgctgtcctcgccgtagtcgtcttctccggccagttcgccaagggccccaacgcttcctcgcaatttgctccggtacaagttgacaacaccctgcggcccacgcgcgataagccggtctccgcagatcaagacttggagagaacggtttcttcaaagctagaaggggaggacactgagcaaattagacttgaggatggacagtctcccaacaaagaggcagcaatcgaagagcagaaaccatcccaggcggctgctattgatcaggatgacaataccttaaatcctgggcttaaacaagcttctggagatgaaaggagcgcaggaggatctgactcattgagcaaggaatctcctccacaaagtcaggaaggagacggaggcacagcagagtcaggtgcggaaccgtacatcaagtgtacggctcaatctgacataaagatctgtgacctctccaacccccggtttgacatctgtgagctgtgcggcgatgctcgcaccattggacagtcctccactgttgtgtatgtcccacagaaccgtgcttccaatggtgaagagtggattatccgagcacagtcccgaaagcaccttccctggatcaagaaggtgaccatcaaatctgtgaattcctcagaaccagaaccaatatgtacctccaagcatcacatcccagccattgtcttcgcactaggtgggctaacagcaaatgtctggcatgacttcagtgatgtccttgtcccactgttccttactgcccgtcaattcaacagagatgtccagcttatcatcaccaacaaccagccctggttcatcaagaagtattctgcaatctttagccgcctcacgcggcatgagattattgattttgattcagatggccagatcaggtgttacccacatgtcattgttggtctcaggagccaccgagaccttggcatcgacccaagttcttctccccagaactatacaatggtagacttccggttgtttgtccgggaagcctatggactgcctgcagctgaagtggacataccctataaggctgacaaagatgaccctgacaagaagccccggataatgctgattgacaggggcaaatccaggagatttgtcaacgtggcacatgttgtacaagggctggattggtttggttttgaggtggtcaaggccgatccaaagatcgattctaaccttgatgaatttgttcgccttgttgactcctgcgatgcaatcatgggcgtgcatggtgcgggcttgactaacatggtgttcctgcggtccgggggagtggtggtgcacattgtgccatacgggatcaaattcatggctgatgggttctatggtgcacctgcacgggacatgggtctgagacatgtcgagtacagcatcagtccagaagagagcacactgctggagaaatacggttggaaccatactgttatcaatgatcctgaaaccatcaggaagggcggatgggagaaggttgcggagttctacatgtccaaacaggacattgtgctcaatatgacaaggtttggacctagcctgttgaatgcaatagagttcattatgtaa</cdnaseq>

Protein Sequence

<aaseq>MGSPKMAKSAMKQGIWRRRIGAPFAAVLVAAVLAVVVFSGQFAK GPNASSQFAPVQVDNTLRPTRDKPVSADQDLERTVSSKLEGEDTEQIRLEDGQSPNKE AAIEEQKPSQAAAIDQDDNTLNPGLKQASGDERSAGGSDSLSKESPPQSQEGDGGTAE SGAEPYIKCTAQSDIKICDLSNPRFDICELCGDARTIGQSSTVVYVPQNRASNGEEWI IRAQSRKHLPWIKKVTIKSVNSSEPEPICTSKHHIPAIVFALGGLTANVWHDFSDVLV PLFLTARQFNRDVQLIITNNQPWFIKKYSAIFSRLTRHEIIDFDSDGQIRCYPHVIVG LRSHRDLGIDPSSSPQNYTMVDFRLFVREAYGLPAAEVDIPYKADKDDPDKKPRIMLI DRGKSRRFVNVAHVVQGLDWFGFEVVKADPKIDSNLDEFVRLVDSCDAIMGVHGAGLT NMVFLRSGGVVVHIVPYGIKFMADGFYGAPARDMGLRHVEYSISPEESTLLEKYGWNH TVINDPETIRKGGWEKVAEFYMSKQDIVLNMTRFGPSLLNAIEFIM</aaseq>

Gene Sequence

<dnaseqindica>2841..4021#1130..1192#985..1029#782..877#606..665#430..507#167..308#aaagacgagacgacttttgttagtactgtttgcctcctcgtcctcctcctcttccctcctccatggtgccgcacccgcacagcaccacaccacctgcctagcgccaagctccaacagaagccgctagcttgaggcaagtccaaggaaggggggaagaggcaggaggatgggatcccccaagatggccaagagcgcgatgaagcagggcatctggcgccggaggatcggcgcgcccttcgccgccgtcctcgtcgccgctgtcctcgccgtagtcgtcttctccggccagttcgccaagggccccaacggtcagtctgcccggattcctatttcgtcttagtgctccaactctctatatagactacagatatgctccttccccagtgcgatatgcgtgcgtacttaaatttcgagtcctccctcttatagcttcctcgcaatttgctccggtacaagttgacaacaccctgcggcccacgcgcgataagccggtctccgcagatcaaggcaagaagaacaaaccttaaagcctcaaggatttttaagtcctatttcccattcctaattcctaattcttgaggttattttgcatgattgctgttcagacttggagagaacggtttcttcaaagctagaaggggaggacactgagcaaattagacttggtaaggttagatatagaaaatggggatttttcttttaaattattggagctcgttgatcttttatgacattccaagccggattagtcgaattttatggtttgggttcggagatgcagaggatggacagtctcccaacaaagaggcagcaatcgaagagcagaaaccatcccaggcggctgctattgatcaggatgacaataccttaaatcctggtgcgatgtgattcttgctatactgtttcacatgtcccaatttagtggcgattttcttttcttttttttttttggaattctgacttctgaattgtgacaaaatgtagggcttaaacaagcttctggagatgaaaggagcgcaggaggatctggtaagtggagctattttcattgcgaccaaggtggtcagtactactatttctttagcatgctatatcttatttttttactttttctttggctcctgaatagactcattgagcaaggaatctcctccacaaagtcaggaaggagacggaggcacagcagagtcaggtactgtacagatacatgcttaatgtagctgtctgtttgtatgtttttcatacactactgacgataaacagactagctttcctggaactagtacagcagcacggatagtgttccaacttcacctgcacaatcaaggactaatagagcaaagagagttattcaagagggaggttaaaggggaaaagttgtattggtagtagtaaagttgatccttgcggtggactaaagctaccagtgagccatatgctttagatgcaccacatagaaatgcattgtttatagacttttctagcaagtaggagctaattattcatgctggtggtccatgttaggaaggcttgtgcagcaagtagataaaagctgtttgtgttgttgggggaacagggctgtagtgccatgggcggagctaccatgattcctacgtatttccaggaatacccaagtttttttttatcaagaaacaagtatacttcaatatatgcacatgtacacgtattagttagccaagtactcttcctcactaagatgtgtaaagatgaaaggtttagaaaagtgaaaaatcttcctgatctttccattatgattgttgaaacaaagttgcacaatagacatgagattgtttacaagcttctcaaattgattctagtacttccagtagcaatagctagtgttgaaataatcttttttgccatgaattatgcgaagaataaattgagaaacaggctaagggatcaatacttgaatcattgcttggtcacatttattgagcgtgaggtttttttgaaagtcaaggactgtgatattataaaccgctttcaaaccatgaaggaacgtagaattaaagctactcttccaagccatgaaggaaccgaaatagaaaattagaggtaccatgtaataatttatagttttatttcttcgattatcggtattgacatactgtgaaccattgattttttctactatgaacttttttttgttagacgggaatacccaactttgaaatcctggctccgccactgtgtagtgctaaactgtgaaaattaaagaataattttcactgtcctaggtaatattgcagttcgaaatctaaacattaggaggctactacttcaacataacatttttttggtggggagttctctggaataaaatgggtataagtccgctaggatacaggggccctgtgagcaagcctgtctattttcgtcgtgttattaaattagccttattgagagcttgttatgccatccatatttcagtatttttagaccgctcaggaaaataacattacgccacacttttgaattgcacaaagtcaagaaaaagagaatgatatacacctaagtatttttattgcgttgttttcttgtattgcccagaccaatgtcaggggcatggcaggaacagagaaaatattgtggcatggcaaggattagccagtcttgttttgtaatttgtggaaacatcatttgtagaaaccctgttgtcatatttgaatattttatttgctagcagacacaaaatagaaatctcctccagtgcattcaaaatttgacaccacaaaaatgagaaatttgagagttatttttacacgctgatatttcttgacaattcaaatatataacctccagtttttgctaaacaggtgcggaaccgtacatcaagtgtacggctcaatctgacataaagatctgtgacctctccaacccccggtttgacatctgtgagctgtgcggcgatgctcgcaccattggacagtcctccactgttgtgtatgtcccacagaaccgtgcttccaatggtgaagagtggattatccgagcacagtcccgaaagcaccttccctggatcaagaaggtgaccatcaaatctgtgaattcctcagaaccagaaccaatatgtacctccaagcatcacatcccagccattgtcttcgcactaggtgggctaacagcaaatgtctggcatgacttcagtgatgtccttgtcccactgttccttactgcccgtcaattcaacagagatgtccagcttatcatcaccaacaaccagccctggttcatcaagaagtattctgcaatctttagccgcctcacgcggcatgagattattgattttgattcagatggccagatcaggtgttacccacatgtcattgttggtctcaggagccaccgagaccttggcatcgacccaagttcttctccccagaactatacaatggtagacttccggttgtttgtccgggaagcctatggactgcctgcagctgaagtggacataccctataaggctgacaaagatgaccctgacaagaagccccggataatgctgattgacaggggcaaatccaggagatttgtcaacgtggcacatgttgtacaagggctggattggtttggttttgaggtggtcaaggccgatccaaagatcgattctaaccttgatgaatttgttcgccttgttgactcctgcgatgcaatcatgggcgtgcatggtgcgggcttgactaacatggtgttcctgcggtccgggggagtggtggtgcacattgtgccatacgggatcaaattcatggctgatgggttctatggtgcacctgcacgggacatgggtctgagacatgtcgagtacagcatcagtccagaagagagcacactgctggagaaatacggttggaaccatactgttatcaatgatcctgaaaccatcaggaagggcggatgggagaaggttgcggagttctacatgtccaaacaggacattgtgctcaatatgacaaggtttggacctagcctgttgaatgcaatagagttcattatgtaagtttgtgaaatgaggtttttgtgtttgttttagctacagcattctacagtcacgaaaaaaatacacttttttgttggccataggtggaataggtattgttgttttagtgctgcttctgtataggattgtcggtgttagatttgaataaccatgatcaactgttacaggaaagatgacaataaacctgtgtgctgagttttcttagagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0327700, RefSeq:Os02g0327700