Os02g0332200

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Revision as of 02:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0332200| Description = Similar to T-complex protein 1 delta subunit| Version = NM_001053260.1 GI:115445890 GeneID:4329211| Length = 5184 bp...")
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Gene Name

Os02g0332200

Description

Similar to T-complex protein 1 delta subunit

Version

NM_001053260.1 GI:115445890 GeneID:4329211

Length

5184 bp

Definition

Oryza sativa Japonica Group Os02g0332200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:13589751..13594934

Sequence Coding Region

13590141..13590522,13593627..13594849

Expression

GEO Profiles:Os02g0332200

Genome Context

<gbrowseImage1> name=NC_008395:13589751..13594934 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:13589751..13594934 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaccgcagtcgccgcctcccccgctcagtcccgcaagactgagacctacaccgacaccaagcgccgggatgacgtccgcggccttaacatagccgccgcgcgcgccgtcgccgacgccgtgcgcacctccctcggcccccgtggcatggacaagatgatctcctccggcgagcaggaggtcatcatcaccaacgacggcgccaccatcctctcccgcatgtccctcctccagcccgccgcccgcatgctcgccgagctctcccgctcccaggacgccgccgccggcgacggtaccactaccgtcgttgtcctcgccggatctctgctccgccgtgctcaatccctactctctgctggtgcccaccctaccgcggcagctgacgctctccaccggctcgccacgcgcgccgttgaggttctccacgccatggccattcccatcgagctctctgaccgcgactccctcgtcaagtccgcatccacagcactcaactctaaggtcgtttcccagtactccagccttctctcccccctcgctgtcgatgccgccctctccgttgttgatcccgctcacccggacctcctcgacctccgagatatccgcgtcgttaagaagcttggtggcaccgttgacgacactgagctcattcgcggcctcatcttcgataagaaggctagccatgctgctggaggaccaactcgggtcgagaatgctaagattgctgtcatacagttccaagtttcacctcccaagacagacatcgagcagagtgtcatcgtatcagattacgcgcagatggatcgcatcctccgtgaggagcgcaattacattcttgggatggtgaagaagatcaaggcttctggatgcaatgttctgctcattcagaaaagcatcttgcgtgatgcagttactgatttgtcacttcattatcttgcaaaggctaagatcctggttgtgaaggatgtggagagggatgagattgagttcatcaccaagaccctgaactgcctgccaattgctaacatcgaacatttccgtgaggacaagcttggttatgcagatcttgttgaggaagtttctgttggggagagcaagattgtcaagatcatgggcattaaggatatgggaaggacagctactgtgcttgtccgggggtccaaccagttagtaattgatgaagctgagcgcagtcttcatgatgccctttgtgtcatcaggtgcttggtgaacaagaggtttttgattgctggtggtggtgcaccagaaatagagatgtcaatgcagcttgctgcttgggcaaaggagctccaagggatggagagttactgcatcaaggagtttgctgaggcacttgaggtcattccttacacattagcagagaatgcagggctcaatcctatttctattgtgactgagcttcggaatcgtcatgccaagggtgagaagaatgcaggcatcaatgtgaggaagggtcagattacaaacatcctggaggagaacgttgtgcaacctttgctggtgagcacaagcgccatcacactagcttgcgagtgtgttagaatgatactgaagattgatgatatagtcactgtgaggtaa</cdnaseq>

Protein Sequence

<aaseq>MATAVAASPAQSRKTETYTDTKRRDDVRGLNIAAARAVADAVRT SLGPRGMDKMISSGEQEVIITNDGATILSRMSLLQPAARMLAELSRSQDAAAGDGTTT VVVLAGSLLRRAQSLLSAGAHPTAAADALHRLATRAVEVLHAMAIPIELSDRDSLVKS ASTALNSKVVSQYSSLLSPLAVDAALSVVDPAHPDLLDLRDIRVVKKLGGTVDDTELI RGLIFDKKASHAAGGPTRVENAKIAVIQFQVSPPKTDIEQSVIVSDYAQMDRILREER NYILGMVKKIKASGCNVLLIQKSILRDAVTDLSLHYLAKAKILVVKDVERDEIEFITK TLNCLPIANIEHFREDKLGYADLVEEVSVGESKIVKIMGIKDMGRTATVLVRGSNQLV IDEAERSLHDALCVIRCLVNKRFLIAGGGAPEIEMSMQLAAWAKELQGMESYCIKEFA EALEVIPYTLAENAGLNPISIVTELRNRHAKGEKNAGINVRKGQITNILEENVVQPLL VSTSAITLACECVRMILKIDDIVTVR</aaseq>

Gene Sequence

<dnaseqindica>4413..4794#86..1308#acaaagccctaatttaaccctaagggaaattgttgctcctcccagagctccgccgccaggccccgccccatctcgatccgccgccatggccaccgcagtcgccgcctcccccgctcagtcccgcaagactgagacctacaccgacaccaagcgccgggatgacgtccgcggccttaacatagccgccgcgcgcgccgtcgccgacgccgtgcgcacctccctcggcccccgtggcatggacaagatgatctcctccggcgagcaggaggtcatcatcaccaacgacggcgccaccatcctctcccgcatgtccctcctccagcccgccgcccgcatgctcgccgagctctcccgctcccaggacgccgccgccggcgacggtaccactaccgtcgttgtcctcgccggatctctgctccgccgtgctcaatccctactctctgctggtgcccaccctaccgcggcagctgacgctctccaccggctcgccacgcgcgccgttgaggttctccacgccatggccattcccatcgagctctctgaccgcgactccctcgtcaagtccgcatccacagcactcaactctaaggtcgtttcccagtactccagccttctctcccccctcgctgtcgatgccgccctctccgttgttgatcccgctcacccggacctcctcgacctccgagatatccgcgtcgttaagaagcttggtggcaccgttgacgacactgagctcattcgcggcctcatcttcgataagaaggctagccatgctgctggaggaccaactcgggtcgagaatgctaagattgctgtcatacagttccaagtttcacctcccaagacagacatcgagcagagtgtcatcgtatcagattacgcgcagatggatcgcatcctccgtgaggagcgcaattacattcttgggatggtgaagaagatcaaggcttctggatgcaatgttctgctcattcagaaaagcatcttgcgtgatgcagttactgatttgtcacttcattatcttgcaaaggctaagatcctggttgtgaaggatgtggagagggatgagattgagttcatcaccaagaccctgaactgcctgccaattgctaacatcgaacatttccgtgaggacaagcttggttatgcagatcttgttgaggaagtttctgttggggagagcaagattgtcaagatcatgggcattaaggatatgggaaggacagctactgtgcttgtccgggggtccaaccagttagtaattgatgaagctgagcgcagtcttcatgatgccctttgtgtcatcaggtaatacttcgctcgaataatgattgaaatgttgtatgcgtacaattttcttggttgtagtcaacttctccagaggtctttttgaatacggtgagcgggcaatgtcttaatggcagataatgcacatatatagggtagggcatgaccagtatttataattgcattggaatcaaagcaaatatgtttttttttttggttctggtccactaagatcatgctccaaatcttttattactttgtttcataacattccccatgcaggagtatcatttgtttttaccatctatatatgcacattttgaagcaacaacttttttctctagtattagttattatttcagaaagtaatacattatgcatctactttcattattttatagcactggcctgattaattgtatacatttgttatgagttagatagagaacacaggcttgccaatgaatatagattgaatgcaacttacatagcgttgaaacaataaattttagacatctgttgttgtattcactgttacaaacttaaattttaatgggtcaattggcaactattttccatgtctgtggtttgtggtatagacttttgtccctcgtagactttacagtcaatttatgtcaaattgtcactgcaataaacatttatcacatggtaatggtattttaatatgctcagtaagtttgctgccagttatagaaacaaggcaatgggtttggataaaccacatcgctggagatgatttactcttgccatgttacttgtacacagttgcaacaattggctataaaaataggtgattttccttatctcccatatatgctgcattaggcatgtttggagaaaggattgttcaaagcctgtcaagtgtgctagaggactactcactagtagttgtaagagtgttttaattgtgtttgatgaatctcaaggccaggatcttaggttgtccagtcagtgctgaatgtttaccattcactttatgattgctcatcttctacaatgcactttataactgctcatcccttctcttgtggcattttaacaacaatgctgtgccaaaagtgtggcagaaagaatcatttgccacagctgtggcaataatttgtaaatatttttcatcatatggggcatggctgttgggaaagtgtgtagttttgcaggaaatcaaatactattgtagcaaattatgacatttaaccatataccctctatattttgaggaataaacttatatatgttttttaagttagtattttttgtaaagactatcttcaggcgtatgtttgtttttattgatgccagtgaacatcctatgtaatattttctttcagaattagcatctccatgactgccataattttgtaactgctgctacaaattatatttttcagtaattccatcttgctatctgttttgcatgtgagcaccttttaaaatattatctggtgacctgacttgactctcttatgatatcatcaattatccattctatgaacctatcttaatctaatgataatttattagtaaatatatgcatttgttttataatatcccttgcttagactctattgtgttctttaattattgtgatactttatgaatatttatatttctttgggactacattccatttgtttgcaattgcaatggagcaacctagtagattttctgacctctaacaaaattgaaagaacataatatagtgtcattactctctagaaaatgatttcaacctgtgtcagtgagaaccaatgcatcgaggaaagcccccaatctccctaccactcatgaggactgtttagtattttattgatcttacaagcatttgtgtaatgtttatacaccacctagtagaattgacaattttccaacagactcacaactattcttcctttttatatattaattctaatttggtggataacttaatgattttactaatattaacagaacacaataagctactaatgtgtactccatagacaacagatagctgtagttctttgtcaatcatcacaacagtttgcactcttaagttacatccacattctccatatttttgaacgaacttagctcaggggaacatgtaatagttcagtttgacatttagctattaataaatgcttgaaatgattatttgtcttacatgaatatgctggaataaggttatatgatttccttttttggtactgcagataactgctagagaaaaaaatctgaatgatgataacaggggtgtgtgcctaaatcttatgtatcagttttgttgataactgttgttaacttgttttattatctactaacaataaacctgttgtacgtaaaatagtatggttcccatttctatttttgtattacttaaaaaatgattggagattggtctgggtattctattatatatcttctagttttgcttggagagctacttagtagctctaccgatgtgggttgcaatgggttacttggtatttgttcttgcctgcattttagattggtgtctggactcattaatgaattacaacgtgtgaactggttaaggtaatcttttttggtctcaacttggcgagtggagtaggtcccaaacaattgatgaaaatacaaagcctcctactagatgtcgatggtttttgtgcctgagtggtgtaatgtcatttgtgcatactattgatgtttctcagattacctgatggctagttgacatttatggcatacaatggacaataagaactacacaattttgctggtttcatgatagtcatcaaagtgctagattggttagatctgctattagcagagttatgtgcaggactgtacaaccagcccttatctaggtgagaggttcttttagggtttatttggctaaactcagtggttttatcttgtttttggtgccttatgggctaagcatatcatcagctttaagttctagcaacaccatttatgtgccatatgggcataattacactcttaactctaaaatggctattatcatgtgcttaagtacttgtgccattttgtaccagtgtgattgaaagtaacttgggcttgtaagagttgattttttcaatgtcttcatctcaattcacatttccgtattcacgcttcaggtgcttggtgaacaagaggtttttgattgctggtggtggtgcaccagaaatagagatgtcaatgcagcttgctgcttgggcaaaggagctccaagggatggagagttactgcatcaaggagtttgctgaggcacttgaggtcattccttacacattagcagagaatgcagggctcaatcctatttctattgtgactgagcttcggaatcgtcatgccaagggtgagaagaatgcaggcatcaatgtgaggaagggtcagattacaaacatcctggaggagaacgttgtgcaacctttgctggtgagcacaagcgccatcacactagcttgcgagtgtgttagaatgatactgaagattgatgatatagtcactgtgaggtaaggttatgtggcggttgaccatgtaggcctgccctacttaggtctacgtgggttttagaattttatttgttagcgtgcctttcagtctctatgttcttagcgtgtggctttgatgtctgtcgaagagatttatattatgtattttgttacctggatggaacggtcaagtgtagccatctgtttgcacttgagacggccggcaacgccttgccatattgttttacacttacagtttgctgcagatttcttcgcatattatcggtcgcacatttgtagtttgcggatgtgtctatagcttgctttaactctcaagataactgtttgcatggcaaagtatgtacatggcgcttcaaataaagaaagcttaataaagagtcaaacgtgattcgtc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0332200, RefSeq:Os02g0332200