Os02g0435000

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Revision as of 02:27, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0435000| Description = Translocation protein Sec62 family protein| Version = NM_001053267.1 GI:115445904 GeneID:4329219| Length = 7476 bp| ...")
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Gene Name

Os02g0435000

Description

Translocation protein Sec62 family protein

Version

NM_001053267.1 GI:115445904 GeneID:4329219

Length

7476 bp

Definition

Oryza sativa Japonica Group Os02g0435000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:14619489..14626964

Sequence Coding Region

14619661..14619931,14621359..14621587,14624353..14624554,14625039..14625356,14626399..14626497

Expression

GEO Profiles:Os02g0435000

Genome Context

<gbrowseImage1> name=NC_008395:14619489..14626964 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:14619489..14626964 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggggaagggagccaaggcgacggcggccaagtcggcggagaaggaaaaggggaagaaggcccccgtatcccgctcatcccgcgccgggtcccaggagaagccagctccaaacaaggatgtttaccaactatttgctgagaaggttagggataacaagcagctggaatcaagatgggcaattatgcaagaaactcgtgttgagtatttccgtggaaaagattttactaccttcatgaggaatcatccagaagttagggaaattttagggccagataaagatttagaagtggaagacattgttaacactctgctgagcaagaaccttgtgataaggtgtgaccgagtttggaaaactgtcagaccaggaaagaagaaattgtcatcgtggcctgcacatttggagatacatcgtgaacaagtgttcactgagaatgatggattttttgcttggatgtttctcaaaaggaggaccttgtggcaaacgattctttcatttgtttggcctctctttgctttggcagtttgcttatttccagtttacccataccaatgcaagattgtggtcttgtactcatgtgctggagctttattgttcattgtctctattcttttgttaagagctgctatctttggcatactatgggtactccttgggaaacgtgtgtggttctttccaaatataaatgccgaagagacaacatttagagaacttgttcggttttggcccgagaaggatgagggagagcgaccaaagtggacatcaagactcttctatgccactgttgctgtattggtgatattactgctcaggcaccatgctccagatgaagcagctagggcaaggtaccagaagaaggtttcgaacataattgatgatgttcttgagtggtctccaaagttagctttgtctgggatgatggaaaaacatactgggactaatgcatcagaaactagcaatcacaccagtggaactgggagtagtcctgtccctcccactaatgaagggaataccgcaaaagcagacccagatatggatcgtcagacgaactcagataaagtccaagatggtgatgagtatggtgatgacatgagaacaagatttagtgaagtttag</cdnaseq>

Protein Sequence

<aaseq>MAGKGAKATAAKSAEKEKGKKAPVSRSSRAGSQEKPAPNKDVYQ LFAEKVRDNKQLESRWAIMQETRVEYFRGKDFTTFMRNHPEVREILGPDKDLEVEDIV NTLLSKNLVIRCDRVWKTVRPGKKKLSSWPAHLEIHREQVFTENDGFFAWMFLKRRTL WQTILSFVWPLFALAVCLFPVYPYQCKIVVLYSCAGALLFIVSILLLRAAIFGILWVL LGKRVWFFPNINAEETTFRELVRFWPEKDEGERPKWTSRLFYATVAVLVILLLRHHAP DEAARARYQKKVSNIIDDVLEWSPKLALSGMMEKHTGTNASETSNHTSGTGSSPVPPT NEGNTAKADPDMDRQTNSDKVQDGDEYGDDMRTRFSEV</aaseq>

Gene Sequence

<dnaseqindica>7034..7304#5378..5606#2411..2612#1609..1926#468..566#agatacagagagactagagaaagagggagactgattgcgcgcgcgcctccctgcgcggctgatcgcgtatcagccgtcccgacgtttggtagggtagcaatccaaattggcccactgtctcctttcccccttcggatcaaggctgacggcgccccggtccaagttgcgcagtgcgacgtgggtcggtgggtgcgtgtggccccgcttgcagcgtgccggcccccggtcctgcctgtctcgcccgttccccctgcgccgcccctcgccggcccgcgcacgcgcccaagacgcacttggtggtccgcgtcgcgctcgtctctcgcgtgcgctgcgtctcccctcctacccctgattcgcacggaattcctcgaatcgcccgtgagatccgcttgattcgatctccgattcaggccccggggtctagggttttcgccgccgttcgagcggagcagagcggggcgtgggagatggcggggaagggagccaaggcgacggcggccaagtcggcggagaaggaaaaggggaagaaggcccccgtatcccgctcatcccgcgccgggtcccaggtaagttcgactgctcatcctctccccgcccccgctcgtcgcttctccgtcgttcgtggtcgctcaagattcggtccgcctgctgccccttcctgtgcattttggtgttcccacaggcgccttgggttcagctattgctctttctaccgctttggttggaattgcgcgttttagcttggtgaaattttcggttggagattacagttgtttgggtcttggaaattcgacccacgggagatttcaggctttcaacagatctggaaaaccatatgttatgtctggtgctattatttttgggctgtgagatttggttttctcgcttgggtgcgagaggacctgcacggactggtgggtttcggtaggttgtactgtgggtttagttgtctcaaatactgtccgaaattctgggtgctcggcttagtattctcgtgttggaatctctggaaatggtagtcttatcaaatgagcctccagtttcttgttcactgtaacttgttatttctcgaggtggcaacatttcagggatctcaacatggttggatgaccatttaggatacattttgctcccgcatagaccaaaagctgattttgtcttcatcttgaattcattgtagcaagttaatttatttgatagtacctcccttcgcttcctagcacaaatgcacaatgcatatagaggttttctcccatccctgggaagtattatatatatacctccccaccacttgaaaggcacaagacttaaaccggctgaactgattagagcaaatggatgttttcagaaatgtcaggttttagggtcctttgggaggtatattgtgtacatagtgttgttaatcaggtggtatataccttttagtagaggtattataacctcatgactaatgctaaatacctatacctcggacaaaaagtcaggagccaatgcaaatgtgaatttcctgtcctatccccagttgtgatcactactgggaggtataataccctctcgcatataactagaagattataataatctgttaatctgctcaatcatatgtaggagaagccagctccaaacaaggatgtttaccaactatttgctgagaaggttagggataacaagcagctggaatcaagatgggcaattatgcaagaaactcgtgttgagtatttccgtggaaaagattttactaccttcatgaggaatcatccagaagttagggaaattttagggccagataaagatttagaagtggaagacattgttaacactctgctgagcaagaaccttgtgataaggtgtgaccgagtttggaaaactgtcagaccaggaaagaagaaattgtcatcgtggcctgcacatttggagatacatcgtgtaagtaccactgctaatgaagaacattgtaggttgaactttctgttgatcttgttgatgtactgttgtatttttgatgatataatgttcctaatatttctattacccttatccacaatagtattacatttttatggcaatcacatctttgttctcttggcttcaagtgaaggttttcttgtgtcttggtgatttctgttcttgcttttaattcctatcatatttatcctgtatttagtttgaaattagataacgactgtatcaggtgaaacaatacatgtatcaactagcacatttgctccattttgcatcgctttgaagctttttttttttgtatcttgcttatttttgaccatgtaataaaccagttatgcctcgcaaattcattttgcttgaaaataatgagtggtgatttcatgatagccttttttcaggatactattatcctcagtagttctaatgtgagcttgatttattcttgcaggaacaagtgttcactgagaatgatggattttttgcttggatgtttctcaaaaggaggaccttgtggcaaacgattctttcatttgtttggcctctctttgctttggcagtttgcttatttccagtttacccataccaatgcaagattgtggtcttgtactcatgtgctggagctttattgttcattgtctctattcttttgtgtaagcacttctctctaacactgtcttttatgctagaaatattagcaccattaactaatcaaggtatttttttttcacgagtacaagacagacaaaacaaaaaataagcttatgctctccctagtgtctattaataatatgtacaatgcatggatgcccttgtaggcttgtactcgcatatgctgttactgcgttacctatgataaatgagacataatttagtactcatgtaactgcaatattttgctatatcatttttgtagttgcatcatcatgttctggagtaaattttattggagtttatgtgctgcttttaaggacgttttgtggcattatctagtagacctaaaattgcttgtgagcatgcaacgttctatttgtatttactgtttagtagtacaaacaactactgcaacaatgagtaggctaagcctgtctagcagtctatctcaaaatcatgcttttagctaaaaactattaatcgctgactatgtttgacagcttgggagtgtgacaaaaatgtgatttatatttttgttagactggtaggtttgaaagccttggaaaaatgattactaaatgacctctaaacctttgagatatgcaataattctttgaaaaaaagagagtaaaatgcactagtcataccgcaacatgtgaggtgtgtgcaatttagtcattcaaaccttgcaaattgctcagaaaagtcactcatattgtttcaggggtgtaaatcacatcaaacacatgccacgtgtgctgtttgcttccaacatggatgatatgctagcctaacattgtgcgctcatgagccacatgggcatggcaagctataaaaatgcaaataagtccgttgtttttcgtgcagctgctgcatgcactcatgagctacatgcagttgcatgaaaaatacaggactaatctgcaatttttaattttgtctaagcacctaaacttgtcctgtccaggtggctcatgagacatcatgttaggctagcatattgtccaaccttggtagcgaacagcccaacatgtcatgtgtacgatgaggtttgcacccctgaataaaaatgagtgactcactttagtaatttgcaagatgaatgactaaattacacacttcacaagttgtggtaccactagtgcatctaactccttaaaaaaactgttgcttgtgatgaagtagattgttgttactagaaaatactccctccatttctaaatatttgacatcgttgactttttagcacatgtttgaccgttcgtcttattcaaaaacttttatgtaatatgtaaaactatatgtatacatataagtatatttaacaatgaatcaaatgataggaaaataattaataattacttaaattttttgaataagacgaactgtcaaacatatttaaaaaagtcaatggcgtcaaatatttagaaacggagggagtatatgttaagagaatctcatgaccaaaacatgacaccaatatatctgaaattgtgcttcaataccatcttcatttcagttcctaactactacatgttggtaaaatactttaccaaatcttgaattccggtcgaccaaaagatgttcaccctttgtttttgggggaaaaaccagtcaaaagtatggtttcttaaaaacaataaatactttgttgtgaggtttcttttcgtgagaatttcttgatgggaatggaaaaaaaagaggggatatgggttgttatatttcttgtttgtttggtggcatgtgaaacagtaggatcttgatagcggaatgtttagtctgaatgtgtgatccctctgaatctctttgttgagggcaccttggtgctaaggggaactatgaatcatacaagttccattccacacagaaaagagattggaactaaagtgaaacttctgtgcacaatcccaccatccaattcatacatatataatttcttgcttgacctgttgcaaaacatctttatgagcgatcaccatttgctaagtgaacaatgagggttggcaagtattgatggcttgcccttattattgttggctatttttctggtccactttgtgcaatttggccatgcaagaccatagcaactggttagttactgcaactagtgattcttctaatcctactcaagaagagggaaatgccccaataccctgccctagctttgactgtgagttcattcaaactattttgtacggtggttttgcctgcatggcatgttgaccaccagaccactaactaaataaaaaaagtaaagcaggactagagaggctgcaacgggaatgaccaatcaataagcaaagatgaagcataggcctgtccatctgtgtgcctgctgtaattttcttatttggttggtggtcgattttattgcacggtcatgtgtacaggaagaacctaattgggtctcagtccttttgactggtttgattttcttactatacacaagtagagcttcagataaacaaatccatcatattttttgtttgtttgatgcagtgtgttaatattcttttttttttatcggaagaacacaaagctagagtgttggtagtgtatacttgctattcatactgttctttgttgcacgtgaccactgtatatgtaattttgacgcataccgctagtattgcttaatttgttaaataattttgggagtgataataaattgttgtttttgtcatgaatgacttatttatctcttttttttgttggttttagttttgaccaatcctctttttttatgtttccaatggtattgcagtaagagctgctatctttggcatactatgggtactccttgggaaacgtgtgtggttctttccaaatataaatgccgaagagacaacatttagagaacttgttcggttttggcccgagaaggatgagggagagcgaccaaagtggacatcaagactcttctatgccactgttgctgtattggtgatattactgctcaggcaccatgctccagatgaagcagctagggcaaggtatgaagttctgatttttgagattgcttataatactatttcaattttgagttagcgaaatcaatgtgatttgcacattgttatgtacaatggggagtcatctttatggtttagttagactgattttgctaggactacttcatgtcaacaaattgagtgaatgatttttggttggatgattgctatatctcttaaattagattgaatgttagaaaatataaatattgtttcctaattttgttaggtgcttatagaccatttgcaaaagcagaactaattagttgggcatatagttttgtcgatctcttagaatgggcaacatcttgcatgagcatgtactggataactggtcaatgtttctaaattctaaattcataaatgcgagctagcataggcacaatttgagcgctcaccataacacatgtcccacaggtggtgtcgaggcactttattttcccctggataatttgatttcttgatctaagtgctaaattgaagtcttccacagcccatttccagctgagtctcttcctaaaattttaagttcaaatgaacccattagtgtttgtctcgtggtaccttacttagaaatactggatgcttgttctaagttgtactgacagattaccatcaattacacactccgtgcacaccaactaggccaatgtcacagaaaattctagaaaaatttgacacatacttccaatagtattacatctacgtgtaaaatcttatcttcaaattcattatattttagctgtaacaaaaaagacaaaatcctgacagatttttacccttaaaactgttagatttttcacttttttgttacggctaaaatatactccctccgtcccacaatataagggattttgagtttttgcttgcaacatttgaccactcgtcttattcaatttttttttgcaaatataaaaaacgaaaagttgtgcttaaagtaatgtagataataaagtaagtcaaataaaataaataataattttaaaaaattttaaataagacgagtggtcaaacattgcaaacaaaaactcaaaatcccttatattatgggatggagggagtaatgaatttgaatatgagactttgcagatatgtgtaatactattaggagtaaatgtccaatttcttatacttcctccgttttacaatgtaagttgttctagcatttcccatattcatattgatgttaatgaatctagatagatatatatgtctagattcattaacatcattatgaatgtaggaaatgctagaatgacttgcattgtgaaacggagggagtagaatttttcgtgacatttgctagttggtgtgcacggagtgtgctgaagcttgtgtgcaaatgatatgttctccattctatatcatattctatcagttgagtaatcatttctcttttttcctgttactaggtaccagaagaaggtttcgaacataattgatgatgttcttgagtggtctccaaagttagctttgtctgggatgatggaaaaacatactgggactaatgcatcagaaactagcaatcacaccagtggaactgggagtagtcctgtccctcccactaatgaagggaataccgcaaaagcagacccagatatggatcgtcagacgaactcagataaagtccaagatggtgatgagtatggtgatgacatgagaacaagatttagtgaagtttagaatcgacttataaactctaaagctctggtaatttggagtacttaccctcggggatttatctgcagaatcatatagataggttactgacaagttcaaattcagggtgctcatgttttgaccatgtttcattcacatattgccagcaatggctgtattacgaggttctcaaagc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0435000, RefSeq:Os02g0435000