Os02g0457500

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Revision as of 02:28, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0457500| Description = Ankyrin repeat containing protein| Version = NM_001053313.1 GI:115445996 GeneID:4329284| Length = 5708 bp| Definiti...")
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Gene Name

Os02g0457500

Description

Ankyrin repeat containing protein

Version

NM_001053313.1 GI:115445996 GeneID:4329284

Length

5708 bp

Definition

Oryza sativa Japonica Group Os02g0457500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16011997..16017704

Sequence Coding Region

16012306..16013871,16014333..16014470,16014574..16014849,16017218..16017565

Expression

GEO Profiles:Os02g0457500

Genome Context

<gbrowseImage1> name=NC_008395:16011997..16017704 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:16011997..16017704 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgcggcgcagggcggccgctgtggcggcggcggcgcgggaggaggaggaggcgtcgcccgctcagcgtctcgtggaggctgccctacggggggacgtggtgaccatggaggcgtgcctggcggccgccgccgccgctgccgcagcggacgacgacacggacgatggcgtgcccgcggcgagccgcgtcggggtggcgcgcctgcgggtgaggtgcgctgaggtggccctccgcgaggaggcggccggggaggtgatcgtggagtcccgcgagctcaagaccgacgtctcgccgctcttcgccgccgcgcacgccggtcatgccgaagttgttcgcaccctcctggttgctggagctgatgttaatcaaaagttatttctaggctatgcaacaacagctgccgcacgtgaaggaaacatccatattctagagatgcttctgcaggctggagtcactcgggaagcttgtgaagattccctatcagaggctgctctttttgctgaggctgaagccgttcggctattagtctgttcagagatgatacagcctgaagctgcagcacatgctttggtgactgcttcttcaagaggctttgatgatgttgtggtcatactactgcagaatggggttgacgttaattccatggctagggtcctcttgaggtctgttaagcctgcactacatgctaatgtgaattgcactccactggtggcagcagtaatgagccggcaaatttcaactgtgaaactcttgattgaggaaggctcttacttggactgtcttgtgcaagttggttcttggtgttgggactctgcaacgggtgaagaacttcgtgttggtgcatgccttggggaaaaatacaacgccatttggtgtgcagtagagtactacgaatgcagtggtgaaatcctcaaattgctgctcgataaagcaccatggttgctggaaaccccacgcaagggtcgaaatcttctttgccatgccatactctgtcagaacccgaatgcagtaagcgtgcttctaaatgctggtgccaatcccagatttcccataatgatgacaaacggcacacacgtctcctacccaatacattttgctgcaaggttgggtcatgcgcccgtactgaaacaactcatgttggatggggctaatatcaatgcgcagacttctactggggacactcctctgatggtctctgcgaggtgtggacactccgattgctttcttgaactgatcaaatcaggggcagaccttgggatagtgaacaatgcaggtgacacagcaataatgcttgctaagaaaagctcatttagctcaaccatcatcgacattctttccagagcattgagttgcggaggctgcatcacttcatcggatatcaccgtcttctctccgctgcacttcttcgctgcaagtgacagtgcagaagctcttctaatgacgctacactactcagcagcagatctgaacaggcctgatggttcagggctcactcctgttatggttgctgcagagtcaggccatgctgacattttcaggcttctagtgatggcgggggcagatatcgctgccacgagtgccgaagggaaatccgcgatgtcgatcatccgaagcagagctcctgaaaccagagatcggttcgaacagatcttactccaggcttcgctcgcggatgcgatcgcaggccagcagccatctttcagacccctgcactacgcggcccggatcggcgacacctcctccctgacgcagctcctgaagatgggccacgatcccaacgcgatggacgaggatggctacacgccgctgatgcacgcggccgccgcaggcaagctggaggcgtgcagggcgctggtgtcgcgcggcggcgccgccgacgcggggagcgagacggcgctgtcggtggcgaggaggagcggcaggtcgaacaaggcgacggaggagtggctgctggaccacgtggcgcgcgcccacgtgctcgccggggaggagctgacgaagcacacgcgcgggggccggggtccgccgcaccgcaaggcggtgcggatgatgcggtccggcgtgctgacgtggggggcgacccgccggaggaacgtggcctgcagggaggcccgggcggggcccagcgcggcgttcaggaggaacaggaggatcatcaggacgggcagcgaggagcagctgatcctaatggtggagacggtgaccgggagggagatccacttcgaggccacctccgcgtccagcgtcgagctatgggtcagaggcatcaatctcatcgtgcaagactgcgcgtggtcaaggccggatgaagctgagcaagcatag</cdnaseq>

Protein Sequence

<aaseq>MSRRRAAAVAAAAREEEEASPAQRLVEAALRGDVVTMEACLAAA AAAAAADDDTDDGVPAASRVGVARLRVRCAEVALREEAAGEVIVESRELKTDVSPLFA AAHAGHAEVVRTLLVAGADVNQKLFLGYATTAAAREGNIHILEMLLQAGVTREACEDS LSEAALFAEAEAVRLLVCSEMIQPEAAAHALVTASSRGFDDVVVILLQNGVDVNSMAR VLLRSVKPALHANVNCTPLVAAVMSRQISTVKLLIEEGSYLDCLVQVGSWCWDSATGE ELRVGACLGEKYNAIWCAVEYYECSGEILKLLLDKAPWLLETPRKGRNLLCHAILCQN PNAVSVLLNAGANPRFPIMMTNGTHVSYPIHFAARLGHAPVLKQLMLDGANINAQTST GDTPLMVSARCGHSDCFLELIKSGADLGIVNNAGDTAIMLAKKSSFSSTIIDILSRAL SCGGCITSSDITVFSPLHFFAASDSAEALLMTLHYSAADLNRPDGSGLTPVMVAAESG HADIFRLLVMAGADIAATSAEGKSAMSIIRSRAPETRDRFEQILLQASLADAIAGQQP SFRPLHYAARIGDTSSLTQLLKMGHDPNAMDEDGYTPLMHAAAAGKLEACRALVSRGG AADAGSETALSVARRSGRSNKATEEWLLDHVARAHVLAGEELTKHTRGGRGPPHRKAV RMMRSGVLTWGATRRRNVACREARAGPSAAFRRNRRIIRTGSEEQLILMVETVTGREI HFEATSASSVELWVRGINLIVQDCAWSRPDEAEQA</aaseq>

Gene Sequence

<dnaseqindica>3834..5399#3235..3372#2856..3131#140..487#agtcgcctcgccacccgaacgttggcagccacgcagcaccagcggcctcctcgctctcctcgccgaccacaccgcaaacacctggcgagcgccaccacctagacgccgctgccgccgccgcctcccacacttggcggccatgtcgcggcgcagggcggccgctgtggcggcggcggcgcgggaggaggaggaggcgtcgcccgctcagcgtctcgtggaggctgccctacggggggacgtggtgaccatggaggcgtgcctggcggccgccgccgccgctgccgcagcggacgacgacacggacgatggcgtgcccgcggcgagccgcgtcggggtggcgcgcctgcgggtgaggtgcgctgaggtggccctccgcgaggaggcggccggggaggtgatcgtggagtcccgcgagctcaagaccgacgtctcgccgctcttcgccgccgcgcacgccggtcatgccgaagttgttcgcaccctcctggtaaggatcgtaaccaaattttcgtcaacagactggtcatttctctcactttccaagatttgaatcccctcgcattcaatctccaagggtttaatcatctgaccaaatatttttagagcgaaataatttgtgcgcattgtctgtcatgacaaaattttcaaatttgttcagtaggtacgttcggagggaattctgaataaattggaagtaatgattagtaaaaaaacattctggatgacttgtaccctttcatagtaatccaaaataaattcgcacaaattatgaatgagtgttttctgatctaaattattaagaataaactaaaaccattcaaacgaatggctgttgcagatccccttcttttcctgttaaaattattactgtagtggagagatttatcagtctattctaatggtggtttatagaatattagcaggtttgccaatgcatatcactgaattgagttaggattagggacatgggtaatcttgttacaccttttggtatggtgtgatggcaactgctctcccttctggaatgggatggataatcttcttcggttgttttcaagacaagaatgtgatggcttcggttccactttgaaacttctatatcacttattaatttgactagcatgtactccttggctaaaactctgcagtgcctaatgaaaaatgtttttctcatcacaagctatgttgttttatgagttttttcatgttggtggtgttccgatgctcaaatctttcctagtgcccccactatacaagtgcctgaagtggacttcaaacctttgatgtgatacaaaacagatgggattccttggacctgttctgtgaagccccttacaaagttaggtagattagtagttgcattcaacagtgtccttgagaagatggcagatcttgctattgacttaccacaggtccaatgcccacaagagatacatcacaactcaccttgagcacattctcgaaatttggaaattgggaagctaagcaatttctcagtagtatattttccaagctttgctatatataaattatcagattttactgttgttaactctaagctgattttactgagaaagtgggcccaatttttagagggaaatattttttgttatccatgtgctttaatattatagatgataatgttctaaaaaggtagtaagcggagtcccgtgtggtcacctcacctcgtagagctcatggggaaggtagccatgtaagcggttttaaggctttcttatttggcatatgaagtataatagtagatatattttttacacgtatattgaacatgcatgtatattttatacgctaatacaggaaccgcacaataagatatgtatcaggtgcacggttccgtttgatatagttgatggatgatggctaaacctgagtttatgacaattattccagcgcacaaatgaatgaattgaatattaaaatgttcatctaaaaaaagttttctaagaaatgctggtaaagaaaaacttttaagaaaacgtaccattaattaagaacttgggaaaaccttcacatgataagccaaaaaaagggacctaagtttgcaatgagattttatactagagcgagatagctagcatactataggaatgtcaaacctggcaattttaagcggccttctaatagagataaatagctggaatatttctaactacagtagctttaattttaaggctgattattagagtggaggtggtggaaaggtggctggtgtatcaagttgtaaaaaagtatactgctcggtatttgaggtacagaaatagctaggttcagtgtagaggtttaacgaggtcgcactgaggacataatgctgatattgtctcgtactctcgttgtcttgatttaggttcatcagtccataaatggcatcgttagaagccacatgcaccattagattctttcatataatacagatattcgattgtttcctgcatatatattggagccgtattagtatctagatatatgtgacatagacatgcctaaagacaggtttatcaggttaacagacctagccagtcagtcagttctaaacagttatgagaagtgtcatgatgaaaatattgcatagtgctaactagagttggtttgttcaaactatctgataacattacaattgctttctcacgaaaattatgacgaaaaactgatcgaatgatgtataggccggcacgagtgagccataaggagataagatctagaagacgaaaagaagacgcttgtgcttaacaggacagccgggaattattcagtatcttagtaaatatattgtattatgaattatgtatactctaaaattgtgttcatggagtaattgacttgatatttgaatacaggttgctggagctgatgttaatcaaaagttatttctaggctatgcaacaacagctgccgcacgtgaaggaaacatccatattctagagatgcttctgcaggctggagtcactcgggaagcttgtgaagattccctatcagaggctgctctttttgctgaggctgaagccgttcggctattagtctgttcagagatgatacagcctgaagctgcagcacatgctttggtgactgcttcttcaagaggctttgatgatgttgtggtcatactactgcaggtctgatcaaatgatatcagttatatacagccagttacaaagataacattttcttgtgtatatatatatgtgtgtgtttactggttcactttcattttgtcagaatggggttgacgttaattccatggctagggtcctcttgaggtctgttaagcctgcactacatgctaatgtgaattgcactccactggtggcagcagtaatgagccggcaaatttcaactgtgaaactcttgattgaggtatctgcaataactgaatatcttttaagcgttcttattagtctaggtacagagatggatgtagtactctgttcacaatgcttagttgtgcattgccattcctacttaactcactgtttttatttgaagaaaaactcattatctaataatacccatttttttttatttgcaacaattccaaccatttctgtagattcaaggcagccatatatatgacaagtggggatgcattatgtctggatgatttttgtttctccgactactttcccattaagtttatgttctgtatgccaagcaatccaaatttgtttccactccagtatgctaaacgcactggccgtccctttttcagtaaacgaaattttaggcagtctaattttccacattatttatgagtactatgctaatttagaatgtttccacattcttagaatgatacttgtatcaaaatttgtgtgcaggaaggctcttacttggactgtcttgtgcaagttggttcttggtgttgggactctgcaacgggtgaagaacttcgtgttggtgcatgccttggggaaaaatacaacgccatttggtgtgcagtagagtactacgaatgcagtggtgaaatcctcaaattgctgctcgataaagcaccatggttgctggaaaccccacgcaagggtcgaaatcttctttgccatgccatactctgtcagaacccgaatgcagtaagcgtgcttctaaatgctggtgccaatcccagatttcccataatgatgacaaacggcacacacgtctcctacccaatacattttgctgcaaggttgggtcatgcgcccgtactgaaacaactcatgttggatggggctaatatcaatgcgcagacttctactggggacactcctctgatggtctctgcgaggtgtggacactccgattgctttcttgaactgatcaaatcaggggcagaccttgggatagtgaacaatgcaggtgacacagcaataatgcttgctaagaaaagctcatttagctcaaccatcatcgacattctttccagagcattgagttgcggaggctgcatcacttcatcggatatcaccgtcttctctccgctgcacttcttcgctgcaagtgacagtgcagaagctcttctaatgacgctacactactcagcagcagatctgaacaggcctgatggttcagggctcactcctgttatggttgctgcagagtcaggccatgctgacattttcaggcttctagtgatggcgggggcagatatcgctgccacgagtgccgaagggaaatccgcgatgtcgatcatccgaagcagagctcctgaaaccagagatcggttcgaacagatcttactccaggcttcgctcgcggatgcgatcgcaggccagcagccatctttcagacccctgcactacgcggcccggatcggcgacacctcctccctgacgcagctcctgaagatgggccacgatcccaacgcgatggacgaggatggctacacgccgctgatgcacgcggccgccgcaggcaagctggaggcgtgcagggcgctggtgtcgcgcggcggcgccgccgacgcggggagcgagacggcgctgtcggtggcgaggaggagcggcaggtcgaacaaggcgacggaggagtggctgctggaccacgtggcgcgcgcccacgtgctcgccggggaggagctgacgaagcacacgcgcgggggccggggtccgccgcaccgcaaggcggtgcggatgatgcggtccggcgtgctgacgtggggggcgacccgccggaggaacgtggcctgcagggaggcccgggcggggcccagcgcggcgttcaggaggaacaggaggatcatcaggacgggcagcgaggagcagctgatcctaatggtggagacggtgaccgggagggagatccacttcgaggccacctccgcgtccagcgtcgagctatgggtcagaggcatcaatctcatcgtgcaagactgcgcgtggtcaaggccggatgaagctgagcaagcatagtcatatcactcgtatccataatggaggagactgcccactgtctgcaagacgccttgcaattatttcatattgtaagtatgcattttgctctctaagttaatatgtttactatcttgtttagcgcttgtaaattaactatttattagctgtttgtacaaaggacgtatttataatgccccccttggcgtgttttgagtccagaggttcaggtttgaggtggggagccttgaaatgagaatggcttttttttttttttacatgtaatgaccttaaattatatttgtgaatgtatatacacgttattttttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0457500, RefSeq:Os02g0457500