Os02g0463700

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Revision as of 02:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0463700| Description = Similar to Helicase-like protein [Oryza sativa (japonica cultivar-group)]| Version = NM_001053339.2 GI:297599183 Gene...")
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Gene Name

Os02g0463700

Description

Similar to Helicase-like protein [Oryza sativa (japonica cultivar-group)]

Version

NM_001053339.2 GI:297599183 GeneID:4329313

Length

4876 bp

Definition

Oryza sativa Japonica Group Os02g0463700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16342508..16347383

Sequence Coding Region

16342508..16342514,16342682..16344773,16345182..16346117,16346186..16346248,16346494..16347048
,16347371..16347383

Expression

GEO Profiles:Os02g0463700

Genome Context

<gbrowseImage1> name=NC_008395:16342508..16347383 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:16342508..16347383 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgatcccagctctatctagcatgataaatagtggtgacatgccatctatatcgttgtccccactcttggatcataatgaacaaagaagacaaaaagatagggagcgatatgcgcagatgactaatgaggataaggaaaataaacttaaaaggcgtcgtgaagcctataagcgcaaaaaaattgaggattcatattgcatctctatccaagaaaagcgtgcacgtgcgagggtgaaatataatagtatggaaccagagcaaaagcaagctaagatagcacaggttaatgctaaccgtgcagcgcggcgcaacactccaagcgaagattccattgcactggagaaccctgggtatattgcatcagatatgccaccccctcttttgactagaccacatagaaaacctgtaacacatggagaaaggcacgcattgatagctcgtcgtaatgaaagcttcatgattagacgggacacaaggacatgtgactcattagaagacccttccataagtgtacaaacaaccagcgacatagaccctcctaagcagccaagcattcagaacactggtgatggtgaagtcatatttgatgttgataccgacgaagagagtgacatgttttatgatcaagattgggaagaatacgatgacatggaaataaaagaagttgccgataccatacctgagggctctagcgttctcgatgagcttgtgtatagcaacataccacaaagcactcatatgctggaacctgtgaaaaattgtgaattttgtgatgcaaagaagtttgagcatgagccgaagggcttctgctgcagaagtggacaaatcagactagccaatcaagacacacctcctgaactcatgaggctctggacaagcaatgattctgatgcccaacatttccgcaacaacataaggtttttcaatggacatttctcattcacttctctctattgtcaccttgatagagagacaacagacatcaggaatagtggtatttacacgtttcgagctcatggccagatgtatcacaatatacattcatttggtactaatggttcaaaccctaagcatctggaattgtacttctatgatgatgatcctaccctagagcatcggtatcgccgttgccgaccagatctatacgagcaagatcaacaagtagtcagcactataaccaacattctacgtggtaatccatactctgagcagtttagaagtttggggcaagtcgagaatctcaaggactaccgtgtggtgttaaaccttgaccaatggttggatcagagaacgtataacgcgccaataacttcagaggtggctgcggtttgggtcgagggaaacgagcgacgaaaaacatttgataagagtgtaatcctacaagggaacaacaacgaaatagaaggcatccggtcatactatggatgctacgatccgttgtcttatccgctattctttcctagaggtgaattgggttggcatgctgatataccaaagtttggtgttaacctagaagatgtgatgaaggctcgtcgtaatcgcaacaacaatgacgagaacccagttcgaaaatatggaaagccagatgtcttcctcacgatgacctgcaaccccaattgggaagagatcgtccgtgaactcgagaatgggcagactcctcaggatcgcccagatctcatcgtgcgcgtatttagagcaaaactagaagaaatgaagaagcaattgtttgaaaaaagcatttttggtactgttaaggcttacacctatgttgtggagttccaaaaaaagggtctaccacacgcccacttcttattgatcatgacagggaaatacaagtacacgtgtgctgagcaatatgatagaatcatctccgccgagctcccagaccaacgcagatacccagagttatatacaatggtcgtcaaacatatgatgcatggtccttgcggcccattgaaccacaattgcccgtgcatgaagaatcgttcatcttgcaagaactattatcccagacctttcaacgctactaccattcaaggcaaagactcctaccctgtatacaggagacgcgatgatggtcgcactgttatagtacgaaaatgtccactagacaacaggtgggttgttccttacaacccttacctcttgcggatgtttaattgccacataaacgttgaggtgtgctcaagcataaaggccgtgaagtacctgttcaaatacatttacaagggtcatgaccgagcatctgtgtctgtaaatggggtagataacgagggggacattgatgagatcaggcaatatagggacgcacgatgggtgacacccccggaagcattatggagaatctatggctttgatctaagcaaaatacatcctgctgtgttgcaactaccgcttcatcttccaaacatgcacatggttgcatatcgaggcaaacaagacatccaggaagtgctcaatgaggatggtgccgagaaatcaatgttgactgcatactttgaagcaaataggttatataaggaagctcggggcatcttgtaccaggattttccagagtattatacttggcaaacaggcaaagggaagaagttttggcaaaaaaggaaaatagctgtccatcaagttggcagaattgtcttggcccatccagcggaaggtgaacgatactatctacgagttctattgaaccacgtgacaggcgcaacatgctatgaagatttacgaacatttgatggcaaaatactaccatcctttcgtgaagctgcagagaaaaggggtttgattgaggcagacaatacactagatgaatgtctcacagaagccgaattgtttcgaatgccgtcatcactccgaaggctctttgcaacaattctggtgttttgtgaacctagcgacatccgtaccctctggaacaatcaccttgaggctatgtcagaagatttccgtcgtgattgccaatgtccacatgcagttcaacaaatggttttaataaatattagggatatgttgcaatcaatgggcaaagatatacgatcgtttcctcttcctgagattgatgagttacatgacacaacaaatggtgtgcctagggagatcattgaggaatctacgatcaaagtagaccctgaggacgtaaatttgtgcaactccctcaacactgagcagagggctgcctatgatgaaattctagcagcagttgatcacaatgaaggagccgtattctttgtggatggcccaggaggcacgggtaagactttcctatacaaggcattgctcgcgacggttcgtaaacaaggaaagattgcaattgcgacggctacttctggtgttgccgcttccataatgcctggaggaaggaccgcacactcacggttcaagataccactaaggatagatgatggtgccatttgcagcttcacaaaacaaagtgggacggccaaactgctccagatggcatcactgatcatttgggacgaagcctctatgaccaagaggcaagcagtggaggcactagacaacagtatgcgggacataatgaacaaaccaaatattccatttggtgggaaaacagttgtgtttggaggtgattttagacaagttctccctgttgtcagaaaggggtctagggctcagatagtagatgcatcgttgcgcaggagatga</cdnaseq>

Protein Sequence

<aaseq>MSIPALSSMINSGDMPSISLSPLLDHNEQRRQKDRERYAQMTNE DKENKLKRRREAYKRKKIEDSYCISIQEKRARARVKYNSMEPEQKQAKIAQVNANRAA RRNTPSEDSIALENPGYIASDMPPPLLTRPHRKPVTHGERHALIARRNESFMIRRDTR TCDSLEDPSISVQTTSDIDPPKQPSIQNTGDGEVIFDVDTDEESDMFYDQDWEEYDDM EIKEVADTIPEGSSVLDELVYSNIPQSTHMLEPVKNCEFCDAKKFEHEPKGFCCRSGQ IRLANQDTPPELMRLWTSNDSDAQHFRNNIRFFNGHFSFTSLYCHLDRETTDIRNSGI YTFRAHGQMYHNIHSFGTNGSNPKHLELYFYDDDPTLEHRYRRCRPDLYEQDQQVVST ITNILRGNPYSEQFRSLGQVENLKDYRVVLNLDQWLDQRTYNAPITSEVAAVWVEGNE RRKTFDKSVILQGNNNEIEGIRSYYGCYDPLSYPLFFPRGELGWHADIPKFGVNLEDV MKARRNRNNNDENPVRKYGKPDVFLTMTCNPNWEEIVRELENGQTPQDRPDLIVRVFR AKLEEMKKQLFEKSIFGTVKAYTYVVEFQKKGLPHAHFLLIMTGKYKYTCAEQYDRII SAELPDQRRYPELYTMVVKHMMHGPCGPLNHNCPCMKNRSSCKNYYPRPFNATTIQGK DSYPVYRRRDDGRTVIVRKCPLDNRWVVPYNPYLLRMFNCHINVEVCSSIKAVKYLFK YIYKGHDRASVSVNGVDNEGDIDEIRQYRDARWVTPPEALWRIYGFDLSKIHPAVLQL PLHLPNMHMVAYRGKQDIQEVLNEDGAEKSMLTAYFEANRLYKEARGILYQDFPEYYT WQTGKGKKFWQKRKIAVHQVGRIVLAHPAEGERYYLRVLLNHVTGATCYEDLRTFDGK ILPSFREAAEKRGLIEADNTLDECLTEAELFRMPSSLRRLFATILVFCEPSDIRTLWN NHLEAMSEDFRRDCQCPHAVQQMVLINIRDMLQSMGKDIRSFPLPEIDELHDTTNGVP REIIEESTIKVDPEDVNLCNSLNTEQRAAYDEILAAVDHNEGAVFFVDGPGGTGKTFL YKALLATVRKQGKIAIATATSGVAASIMPGGRTAHSRFKIPLRIDDGAICSFTKQSGT AKLLQMASLIIWDEASMTKRQAVEALDNSMRDIMNKPNIPFGGKTVVFGGDFRQVLPV VRKGSRAQIVDASLRRR</aaseq>

Gene Sequence

<dnaseqindica>4870..4876#2611..4702#1267..2202#1136..1198#336..890#1..13#atgtcgatcccaggtaatccaacaactctgttgtatgcattttacatattactctgctgtgtagttaataatactacatattacctgtagtgagtattttgcaccagcagttccaaatccttggggttccctgtaaaagacaatgaaatagatttacatattactctgttgtgtagttaataatactacatattacctgtagtgagtattttgcaccagcagttacaaatccttggggttccctgtaaaagacaatgaaatagtaaaataatgcatctgattttccaataatgcaacaaaataactaatgtaacttttttgtttatcatcaacagctctatctagcatgataaatagtggtgacatgccatctatatcgttgtccccactcttggatcataatgaacaaagaagacaaaaagatagggagcgatatgcgcagatgactaatgaggataaggaaaataaacttaaaaggcgtcgtgaagcctataagcgcaaaaaaattgaggattcatattgcatctctatccaagaaaagcgtgcacgtgcgagggtgaaatataatagtatggaaccagagcaaaagcaagctaagatagcacaggttaatgctaaccgtgcagcgcggcgcaacactccaagcgaagattccattgcactggagaaccctgggtatattgcatcagatatgccaccccctcttttgactagaccacatagaaaacctgtaacacatggagaaaggcacgcattgatagctcgtcgtaatgaaagcttcatgattagacgggacacaaggacatgtgactcattagaagacccttccataagtgtacaaacaaccagcgacatagaccctcctaagcagccaagcattcagaacactggtgagaatgctatctataaacacttgcttcatgttctgatgcaatatatattcttgttgtagttataaccaatttttttttcaatagacaattcgtgtttaacatctcaagataccaacaatgtagagcctacatcaatgtcattcatcaatgatgacggtaaacattctcacctatatttatgttcactttcactacagttaggaaaagcatatgtataaacacactcactggtttctatgtaggtgatggtgaagtcatatttgatgttgataccgacgaagagagtgacatgttttatgatcaaggtaatcctatcactattttctactgccacataaacagagacttacgtcttggtgctgaatcatttcagattgggaagaatacgatgacatggaaataaaagaagttgccgataccatacctgagggctctagcgttctcgatgagcttgtgtatagcaacataccacaaagcactcatatgctggaacctgtgaaaaattgtgaattttgtgatgcaaagaagtttgagcatgagccgaagggcttctgctgcagaagtggacaaatcagactagccaatcaagacacacctcctgaactcatgaggctctggacaagcaatgattctgatgcccaacatttccgcaacaacataaggtttttcaatggacatttctcattcacttctctctattgtcaccttgatagagagacaacagacatcaggaatagtggtatttacacgtttcgagctcatggccagatgtatcacaatatacattcatttggtactaatggttcaaaccctaagcatctggaattgtacttctatgatgatgatcctaccctagagcatcggtatcgccgttgccgaccagatctatacgagcaagatcaacaagtagtcagcactataaccaacattctacgtggtaatccatactctgagcagtttagaagtttggggcaagtcgagaatctcaaggactaccgtgtggtgttaaaccttgaccaatggttggatcagagaacgtataacgcgccaataacttcagaggtggctgcggtttgggtcgagggaaacgagcgacgaaaaacatttgataagagtgtaatcctacaagggaacaacaacgaaatagaaggcatccggtcatactatggatgctacgatccgttgtcttatccgctattctttcctagaggtgaattgggttggcatgctgatataccaaagtttggtgttaacctagaagatgtgatgaaggctcgtcgtaatcgcaacaacaatgacgagaacccaggtttatatttcaacaccatgttttgttatgacacatgtttacatacgtcgctctcttctaatctgatgttattcacagattcaagtaacagactgtgtgtttccgtgagagactactactgctacaagttccaaatgcgacctggcatattcaacccaatattgcatggcggacgtcttttccaacagtttgcggttgatacatacatcaagattgaaagctcgcggctagactacatatttaatcattaaaaagagataagggcagatctataccaaggcttgttagatagcattaatatcggagagaacagagggaatgcagtaggcaagcggacggtccttgcttcatcatttatcggagggcctcgggataaattgcgccgatacctagatgcaatggctttagttcgaaaatatggaaagccagatgtcttcctcacgatgacctgcaaccccaattgggaagagatcgtccgtgaactcgagaatgggcagactcctcaggatcgcccagatctcatcgtgcgcgtatttagagcaaaactagaagaaatgaagaagcaattgtttgaaaaaagcatttttggtactgttaaggcttacacctatgttgtggagttccaaaaaaagggtctaccacacgcccacttcttattgatcatgacagggaaatacaagtacacgtgtgctgagcaatatgatagaatcatctccgccgagctcccagaccaacgcagatacccagagttatatacaatggtcgtcaaacatatgatgcatggtccttgcggcccattgaaccacaattgcccgtgcatgaagaatcgttcatcttgcaagaactattatcccagacctttcaacgctactaccattcaaggcaaagactcctaccctgtatacaggagacgcgatgatggtcgcactgttatagtacgaaaatgtccactagacaacaggtgggttgttccttacaacccttacctcttgcggatgtttaattgccacataaacgttgaggtgtgctcaagcataaaggccgtgaagtacctgttcaaatacatttacaagggtcatgaccgagcatctgtgtctgtaaatggggtagataacgagggggacattgatgagatcaggcaatatagggacgcacgatgggtgacacccccggaagcattatggagaatctatggctttgatctaagcaaaatacatcctgctgtgttgcaactaccgcttcatcttccaaacatgcacatggttgcatatcgaggcaaacaagacatccaggaagtgctcaatgaggatggtgccgagaaatcaatgttgactgcatactttgaagcaaataggttatataaggaagctcggggcatcttgtaccaggattttccagagtattatacttggcaaacaggcaaagggaagaagttttggcaaaaaaggaaaatagctgtccatcaagttggcagaattgtcttggcccatccagcggaaggtgaacgatactatctacgagttctattgaaccacgtgacaggcgcaacatgctatgaagatttacgaacatttgatggcaaaatactaccatcctttcgtgaagctgcagagaaaaggggtttgattgaggcagacaatacactagatgaatgtctcacagaagccgaattgtttcgaatgccgtcatcactccgaaggctctttgcaacaattctggtgttttgtgaacctagcgacatccgtaccctctggaacaatcaccttgaggctatgtcagaagatttccgtcgtgattgccaatgtccacatgcagttcaacaaatggttttaataaatattagggatatgttgcaatcaatgggcaaagatatacgatcgtttcctcttcctgagattgatgagttacatgacacaacaaatggtgtgcctagggagatcattgaggaatctacgatcaaagtagaccctgaggacgtaaatttgtgcaactccctcaacactgagcagagggctgcctatgatgaaattctagcagcagttgatcacaatgaaggagccgtattctttgtggatggcccaggaggcacgggtaagactttcctatacaaggcattgctcgcgacggttcgtaaacaaggaaagattgcaattgcgacggctacttctggtgttgccgcttccataatgcctggaggaaggaccgcacactcacggttcaagataccactaaggatagatgatggtgccatttgcagcttcacaaaacaaagtgggacggccaaactgctccagatggcatcactgatcatttgggacgaagcctctatgaccaagaggcaagcagtggaggcactagacaacagtatgcgggacataatgaacaaaccaaatattccatttggtgggaaaacagttgtgtttggaggtgattttagacaagttctccctgttgtcagaaaggggtctagggctcagatagtagatgcatcgttgcgcaggtccaacctctgggattgcatgcgacacttgcagctcgtgcgcaacatgagggcacaaagtgatccgtggtttgcagaatacctactacggataggtaatggcactgaggagaccaacgataatagtgagatacatctccctgacgatatatgtgtgccatatacaggagatga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0463700, RefSeq:Os02g0463700