Os10g0412700

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Revision as of 08:37, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os10g0412700| Description = Thaumatin, pathogenesis-related family protein| Version = NM_001071124.1 GI:115481991 GeneID:4348612| Length = 1502 ...")
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Gene Name

Os10g0412700

Description

Thaumatin, pathogenesis-related family protein

Version

NM_001071124.1 GI:115481991 GeneID:4348612

Length

1502 bp

Definition

Oryza sativa Japonica Group Os10g0412700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:14756590..14758091

Sequence Coding Region

14756714..14757474,14757970..14758036

Expression

GEO Profiles:Os10g0412700

Genome Context

<gbrowseImage1> name=NC_008403:14756590..14758091 source=RiceChromosome10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008403:14756590..14758091 source=RiceChromosome10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtgcttatccttgctctccggcgttcatcccctaccactactcctgctcattactctcttaggaccggtggcgctcgtgcgcggcgtcaccttccgcgtggtgaacaagtgcccgttcccggtgtggccggcggcggcgcccaacgccggccacccggtgctcgccggcggcggcttcctcctcccgccgggccagtccaggcgcgtcagcgcgccgcccacctggaacggccgcttctggggccgcaccggctgcaacttcacctccaccgccaccaaccaccacggcaacgccgccgcgtcctgcctcaccggcgactgcggcggccgcctcgcgtgcaacggcaccgccggcgcccctccggccaccctcgtcgaggtggacctccacgaggaccagagcaaggggagctcctacgacgtcagcctcgtcgacggctacaacctgccggtggccgtgtggacgaagccccccacccccggcgccgccgccgccgatcgcaagtgcgtcatccccggctgcgccaagaacgtcaacgcggtgtgcccgccggagctgcaggtgacggcggcggcggcggtggtggcgtgcaagagcgcgtgcgtggcgttcgggacggacgcgttctgctgccgcggcgcgcacggcacggcggagacgtgccgcggcagcgcgtactcgcgggtgttccgggacgcgtgcccggcgtacgtcagctacccgtacgacacggcggcggcgaggtgctacgcggaggtgtacgtgctcacattctgtccgtccagatggggcgcgggggcagatcgtgtggcccaggcttga</cdnaseq>

Protein Sequence

<aaseq>MACLSLLSGVHPLPLLLLITLLGPVALVRGVTFRVVNKCPFPVW PAAAPNAGHPVLAGGGFLLPPGQSRRVSAPPTWNGRFWGRTGCNFTSTATNHHGNAAA SCLTGDCGGRLACNGTAGAPPATLVEVDLHEDQSKGSSYDVSLVDGYNLPVAVWTKPP TPGAAAADRKCVIPGCAKNVNAVCPPELQVTAAAAVVACKSACVAFGTDAFCCRGAHG TAETCRGSAYSRVFRDACPAYVSYPYDTAAARCYAEVYVLTFCPSRWGAGADRVAQA</aaseq>

Gene Sequence

<dnaseqindica>618..1378#56..122#atctccatgacagcttagttagtttctctggtttgctatatagatttagacacagatggcgtgcttatccttgctctccggcgttcatcccctaccactactcctgctcattactctcttaggtactccttcgttctagaataagtttacttttcaaccctccgatttatcataaataaatttatttttagtcattattatattggagtttgtaaaattaggagatggatacattaagagtagataaagcaaaaaataattgtatcaggatttgataaagtgaagatattttagtcttttaggttttaattgatatgtggagaataggaaaattgaacttattgtaaaacggaggaagtagatcacatccatggcttttgtatattaaattagttccattaaaatctacaataaaatatgtctgatttatttgaaactgaaattgctagctatttttataaactctgttaaagagagagaataaaacctacgttcttttaatatgaaatggataccgtaaatcacacccacctacgttctttttcttttggcaaaatttacttttcagcattggtaatttccatgaattttgttgtgctgctgtggatgatgatcaggaccggtggcgctcgtgcgcggcgtcaccttccgcgtggtgaacaagtgcccgttcccggtgtggccggcggcggcgcccaacgccggccacccggtgctcgccggcggcggcttcctcctcccgccgggccagtccaggcgcgtcagcgcgccgcccacctggaacggccgcttctggggccgcaccggctgcaacttcacctccaccgccaccaaccaccacggcaacgccgccgcgtcctgcctcaccggcgactgcggcggccgcctcgcgtgcaacggcaccgccggcgcccctccggccaccctcgtcgaggtggacctccacgaggaccagagcaaggggagctcctacgacgtcagcctcgtcgacggctacaacctgccggtggccgtgtggacgaagccccccacccccggcgccgccgccgccgatcgcaagtgcgtcatccccggctgcgccaagaacgtcaacgcggtgtgcccgccggagctgcaggtgacggcggcggcggcggtggtggcgtgcaagagcgcgtgcgtggcgttcgggacggacgcgttctgctgccgcggcgcgcacggcacggcggagacgtgccgcggcagcgcgtactcgcgggtgttccgggacgcgtgcccggcgtacgtcagctacccgtacgacacggcggcggcgaggtgctacgcggaggtgtacgtgctcacattctgtccgtccagatggggcgcgggggcagatcgtgtggcccaggcttgacggatatgatgtgagacgtatcgagtagacgagtaacactccggcatgcgtgtatctaagtaggagtagtatgtactatatacggagtatgtatttatacgtgtactattacgtatttacattc</dnaseqindica>

External Link(s)

NCBI Gene:Os10g0412700, RefSeq:Os10g0412700