Os02g0465400

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Revision as of 02:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0465400| Description = Similar to 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC reductase) (Sterol delta-7-reductase) (Dwarf5 protein)|...")
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Gene Name

Os02g0465400

Description

Similar to 7-dehydrocholesterol reductase (EC 1.3.1.21) (7-DHC reductase) (Sterol delta-7-reductase) (Dwarf5 protein)

Version

NM_001053344.1 GI:115446058 GeneID:4329318

Length

6075 bp

Definition

Oryza sativa Japonica Group Os02g0465400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16420162..16426236

Sequence Coding Region

16420571..16420637,16421233..16421315,16421391..16421472,16421592..16421656,16421745..16421870
,16421998..16422098,16423332..16423458,16423678..16423791,16424027..16424092
,16424184..16424286,16425341..16425396,16425609..16425834,16425950..16426086

Expression

GEO Profiles:Os02g0465400

Genome Context

<gbrowseImage1> name=NC_008395:16420162..16426236 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:16420162..16426236 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaagcctagggcctccgccgccgcggcgaaggcgccagcctccacgccgcccaagacggtgcactcggcgctcgtcacctacgcctccatgctctccctcctctccctctgcccgcccttcgtcatcctcctgtggtacacgatggtgcacgcggacggatccgtggtgcgggcgtacgagcacctccgcgagcacggggtgctggaggggctcaaggccatctggcccatgccaaccatggccgcctggaagatcatcttcggcttcggcctcttcgaggccgcgctgcagcttctcctccccgggaagcgcttcgagggccccgtctccccctcgggcaacgtgcccgtctacaaggcaaatggcttacaagcatatgcagtgaccttgataacatacctgagcctgtggtggtttggaatttttaaccctgcaatagtatacgatcacttgggggaaatatactctgctcttgtatttggaagctttgtgttctgtatttttctgtacataaagggtcatcttgctccatcttcatctgattctggatcctcagggaatgtgataattgatttctactggggaatggaactatatcctcgcattggtaagcactttgatatcaaagtgttcacaaactgccgttttgggatgatgtcctgggctgttcttgctgtaacctactgcataaagcagtatgaaatgaatggccgagttgcagattcaatgcttgtgaatactgcattgatgttgatctatgtcaccaagttcttctggtgggaatctggatactggtgcactatggacattgctcatgatagagctggtttctacatttgctggggatgcttggtatgggttccatcaatatacacctctcctggaatgtaccttgtcaaccaccctgtgaatttgggtccccagctagcactctcaattctccttgctggaatattgtgcatatatataaactatgactgtgatcgtcagcgccaagaattccgtcggacaaatgggaaatgctcaatatggggcaaagctccatctaagattgttgcttcctatcagactacaaatggagaaacaaaaagcagtcttctcttgacttctggatggtggggcttgtctcgtcattttcactatgttccagagattctatctgcttttttctggacagttccagctctttttgatcatttcctgccgtacttctatgtgatctttctgaccatattgctgttcgaccgagctaaaagggatgatgaccgatgctcatcaaagtatggcaagtattggaagatgtactgcaacaaagtaccgtgcagggttattcctggcatttactga</cdnaseq>

Protein Sequence

<aaseq>MAKPRASAAAAKAPASTPPKTVHSALVTYASMLSLLSLCPPFVI LLWYTMVHADGSVVRAYEHLREHGVLEGLKAIWPMPTMAAWKIIFGFGLFEAALQLLL PGKRFEGPVSPSGNVPVYKANGLQAYAVTLITYLSLWWFGIFNPAIVYDHLGEIYSAL VFGSFVFCIFLYIKGHLAPSSSDSGSSGNVIIDFYWGMELYPRIGKHFDIKVFTNCRF GMMSWAVLAVTYCIKQYEMNGRVADSMLVNTALMLIYVTKFFWWESGYWCTMDIAHDR AGFYICWGCLVWVPSIYTSPGMYLVNHPVNLGPQLALSILLAGILCIYINYDCDRQRQ EFRRTNGKCSIWGKAPSKIVASYQTTNGETKSSLLLTSGWWGLSRHFHYVPEILSAFF WTVPALFDHFLPYFYVIFLTILLFDRAKRDDDRCSSKYGKYWKMYCNKVPCRVIPGIY </aaseq>

Gene Sequence

<dnaseqindica>5600..5666#4922..5004#4765..4846#4581..4645#4367..4492#4139..4239#2779..2905#2446..2559#2145..2210#1951..2053#841..896#403..628#151..287#gttgggccccgtctgtctctgccccacccacgcatactaggaaggcaggggagacgaggagccagagccaagtcaagccgcttcctctcctctcgtctcggcgcctcactcgatctccttcctccactgtcgctcagatcgacgcgggccatggccaagcctagggcctccgccgccgcggcgaaggcgccagcctccacgccgcccaagacggtgcactcggcgctcgtcacctacgcctccatgctctccctcctctccctctgcccgcccttcgtcatcctcctgtaagcgccgcgccgcatctccctctcctccgcacccgatctgtgacctgacccccgagatttttttgggttttgcgtgcgtgcgtgcgtgcgcgtgcgtgcgggggcgttgcaggtggtacacgatggtgcacgcggacggatccgtggtgcgggcgtacgagcacctccgcgagcacggggtgctggaggggctcaaggccatctggcccatgccaaccatggccgcctggaagatcatcttcggcttcggcctcttcgaggccgcgctgcagcttctcctccccgggaagcgcttcgagggccccgtctccccctcgggcaacgtgcccgtctacaaggtgccttgtgctggctgccatggactctcttctcaaatgcattgctctagcctctccgaaatggagagaaacgtatcacattattttaccaccccccccccccccccccccccgaaaaaagaaaaagactattgtgatagtattttttgctcatgtccttttagttaataattatcgttttctctgttttttttttgctctctttctttcaggcaaatggcttacaagcatatgcagtgaccttgataacatacctgagcctgtggtggtaagatagtcttctttccttatgtggacctgctgattgaggatacagttcaaaacttgggattacgacactcaacattcacctgccttctctgttcagccatctagcaaattgtctgtctgtccatgcttgcttgttccctcgataactatgcctatctatactatttatatgatagtggtcagccggaatttgttagctagtgattgtgaaaagtagctttgaatgtatagccattatgttctcctgacttcgatctaatttaaaataccatgcttaataaacagcattttctcaactgtagcaactatagcttccccattatcatgatggctgacaggacaatttcatacacacttctttggttgcctgttgtggttgtttaattctcgaggactcaaggtgccatactgtcccacaaacattccaacataccttagtttattttgaagttaaaatagttactaatgccacccaaacacaaatcaactcttggagcttggcaccaatttttttacctgaagttgctaggttaagccgtgtggtccccaccttcttaccatcttgcccatgctatccactgcggatgcttttgggtactatccgttctcattaaaagcaccaccatggaagttgggacttgggagtgaactctagcaaaagcacacacaggcaacttagagcacttaaacatgggcttgtttgttgcattattttctccctttcaaatttgagtagagtagttgttatcctggattaatgcacgccttgcacgaggctcaaattgatgaaggagcttcgatgcaccttagcatatgatgagcactataacatattaatatttcacccatgattttggtacattacacaatggaggaatcaggaaaccattaataacttgttctgcatattttcaaattatatttattttatttttatattgtgtttgtgacaaccctttttgtaagctacaccatggtgattcaaagccttttattgtacaattatcatttgtatagccactattcgcctaaaccattttatcatctgtcaggtttggaatttttaaccctgcaatagtatacgatcacttgggggaaatatactctgctcttgtatttggaagctttgtgttctgtatttttctgtacataaaggtgagcttatttattaggcttgttattctttatgtagatatgtaccatgcttcgtttattgatgggctacccttcttttttctccatttagggtcatcttgctccatcttcatctgattctggatcctcagggaatgtgataattgatttctactgggtgagttacatttcttgcatgtgatgggttaattagatcgatcaattatatggacttgttctatcattagtattgtattagcgatgacattcttcacctgtgtttatatttgataattgatacacagtgatagtgtttattatttattttctctttttttgtggggaggtattttcattattttgattttacatgaatttttctttacttgtgtatataacatgtaacattccagggaatggaactatatcctcgcattggtaagcactttgatatcaaagtgttcacaaactgccgttttgggatgatgtcctgggctgttcttgctgtaacctactgcataaagcaggtcagaatactataatactctggtgatatgctagcttgcaacttagaggcacatctatgctttggttgctatccaatatctagtacttttgtacatagaactcacttatgtgctctaaaatagtacaatgggaatgtaaaagatagaaagcttttgttaacattatatgattaagttatccactaaacttagttgatttctttgaactttgcaatgcagtatgaaatgaatggccgagttgcagattcaatgcttgtgaatactgcattgatgttgatctatgtcaccaagttcttctggtgggaatctggatactggtgcactatggacattgctcatgatagaggttggtagctcctatgtttttaattacatgcatcttaacgtttcaaaatatgatgtttgaaaagaaattttctccaaaatgaaatgctgtatgtaggttaattctacaaatttattcatgttctttaaagttaagaatagtagctccttacattcaaaggatgtcaccgtgatgtatgcaagtgcttaaatggtgtaattaactcaactgtctcatagtgagacaagctaagttgacctgcgaagataaccacaaccccctccccccaaccccccaaataataataaagttaaataaagtaatacacaagtgaacttaataaatttatatacgacaaaatgtgaagactgttaatattgatttttctaggttaccacatcatcatcataaaacttctgggccattaccagttattactatttcaaagaggttttgcatgtaaacttgaagatacatgaccctgtaaacctcagtcaatcattgcagaaatgctttcatcagtgtatcttaacaagttcatcagttactgatcctcgtagatgcatttaattagttgtgtggatcgaacacaacggtgtaagttacatgttttgcaaaaagagaagccgccggcggcagcaccaactctatttgctagataaggacccatcaaagcaaggggtgggtaagagagggcattgcgtaaggacacattagcatcaaggtatcggcatggattttttttttggaggggcaaaagatgtaccttggatttatgttctacagatcagattggatgggtatctcactgcacctagtagctaacatatggatgccatgacaaaaatctcaagccctagggcctgaggccctagctgtcctaggcctgataccacccccaattataaaaaaaaacgcacttagtgacctcacttgaatcaattgtacaagttcgattactagatacttagtttcttagtttacagtgacctattagaaccaccatgacaaatttgatgaagccaaggtgtattttattctaataatccctggaagatgtaaataaagtgaactatttgaaccaccatgacaaatttgatgatgccaaggtattttattctaataatccatgaagatgtaagtttgaaatgagaagccaggattggattggtattgtcgtgtgattaattgatacagcactcaacttttaatttgcaagcatgcactattttgctgacatatatttcctaccagctggtttctacatttgctggggatgcttggtatgggttccatcaatatacacctctcctggaatgtaccttgtcaaccaccctgtgaatttgggtccccaggttcatctttcagaatgtttttctttcatgtgttaattgtatttgaatatactgtttagttctaccagatgatgatttgtgattgttgtctaacagttgaaatgaatatctgttaaatttgttgcagctagcactctcaattctccttgctggaatattgtgcatatatataaactatgactgtgatcgtcagcgccaagaattccgtcggacaaatgggaaatgctcaatatggggcaaagctccatctaaggttgaagcattaaatatttagctgcttccaaattaacaaatagcatgtttataacattgctgacgtctttattttggtggaactttagattgttgcttcctatcagactacaaatggagaaacaaaaagcagtcttctcttgacttctggatggttaatatattcgtcatttcttctttacatagttcatcaaaagtgatttgtaccatgtttgtttcaatagaggcaatgaatggcttttgagcatgcaccctcattttccatttggacaggtggggcttgtctcgtcattttcactatgttccagagattctatctgcttttttctggacagttccagctctttttgatcatgtaagcacaccctgattacaatttatctcgactttagccaggatggtaataactgtggtccctgctttcgtgtagttcctgccgtacttctatgtgatctttctgaccatattgctgttcgaccgagctaaaagggatgatgaccgatgctcatcaaagtaagtaaactttaccacctgtaatatataagttgaatgattcaacattttagctaatgtttcacactgatagaagcacatgttccaaatattaaagcttattagtgtagaggataatttctgggaacagcctagttgtgcaagttttatccctgatggttgattctgagtagggattaaaatggagaggatatggacggataaagctcgtaccatatccgttttcatattttagttggataaggaaacaaatacaaattatctcaaatacaaataaggaccaaatatgattggacatgaatacggaaacaaatatttctcggaacacgaaaccacctaaacttttaataaaaacaaatacaatcatacataattaactcatattacataaaacgtttcatcatagactaaacaatgctagttaagttcaacatgtacaacattaccggtataaatgcatgtctaactgatattcttatccgtatctggattatccattttgaattgtatccgtatttgtttttctctagagcggacggaaactattcgctcgttttcatcctgattctgacgtgagttttatgcattctgacaggtatggcaagtattggaagatgtactgcaacaaagtaccgtgcagggttattcctggcatttactgaggttgttgaccatgttcaacaacttctcgggataaaactcagccatgttgtgaattcctttctctgggacgatctactgctgtttgtgtaatatgtcattagcttgatgtatgcaggattagattcgggctgattggtttcaaccttttgagtttgctgtatccaaccctgacacagatgagtcaacgatgccgccaaatcgtgatttttcttgttagctcgctgataggagagatgattgcaggatcatagtttgtgtagtttgtaccttataatggatgtttcgacttcatttttctgctagaagcgattaggcagcacgaaaatgaaattgtttgaggttctgtactgctcgaataatgttgctgcaactgtattatccatgaactgtaataattcaaagtttggc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0465400, RefSeq:Os02g0465400