Os02g0469000

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Revision as of 02:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0469000| Description = Conserved hypothetical protein| Version = NM_001053360.2 GI:297599211 GeneID:4329336| Length = 5548 bp| Definition ...")
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Gene Name

Os02g0469000

Description

Conserved hypothetical protein

Version

NM_001053360.2 GI:297599211 GeneID:4329336

Length

5548 bp

Definition

Oryza sativa Japonica Group Os02g0469000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16608415..16613962

Sequence Coding Region

16608415..16608421,16611141..16611879,16611962..16611992,16613738..16613962

Expression

GEO Profiles:Os02g0469000

Genome Context

<gbrowseImage1> name=NC_008395:16608415..16613962 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:16608415..16613962 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatttacggagacatttcagctctgctctctgaaccaagtattcctgaagagcagcctgaggcatctgaattcgatgacgtcgtccctgcaattttggaatcaattaaatcaagtgagaaggcattcaaaccttcaccggaggaggctgcttgggctgattcttgttttgtgcagacatctgagctttcggatagtgactggggagcaatgaagcatgccctgcttaatgctcttgaaaagccaacagaaatacccaacaatacttctgaaattgtgcacgaagaaggttcccatgcaattttagaggtcaaacctcactctctccctgctgaaattgtttctcagcatgatgacatgcaaatggagcaaaaagaaaataatgattatgacactggtactactgaagcttcggaagttgctaatgtaattaggggcacaaatgaacatggtaagcaaatggatggatacacagccagacctgaagatggcgatgagttgtcttcgtctgaagttcttgagcagacagagtcaagagagactatctttaaggtgtgggatctggacgttccgttttctgatgaggatgagcttgaactcatcaaggatctgaagaaactcctcaaggacaatcctcaggagtctgaatttcgacctcccagtggaacagccaagacattgagccagatagccgtcgatgatctagtggcagacttgagcgacttgtcattgcagcaaacagacgatgcagatggcttaagtggaggctgtgcgtttctcacgctagacctgctagcacaactccggtctgacttaacttcggctacacaagcacatgcccttgctttcaaaggcgagctaggacggggtcttgctatcaagccgattgccagagaggtggagcgactggagatggcccagccggccgaggaactccaagttctagtcgaagcaggagttgccagagagcttgagctagttgaggaattagcagttggctaa</cdnaseq>

Protein Sequence

<aaseq>MIYGDISALLSEPSIPEEQPEASEFDDVVPAILESIKSSEKAFK PSPEEAAWADSCFVQTSELSDSDWGAMKHALLNALEKPTEIPNNTSEIVHEEGSHAIL EVKPHSLPAEIVSQHDDMQMEQKENNDYDTGTTEASEVANVIRGTNEHGKQMDGYTAR PEDGDELSSSEVLEQTESRETIFKVWDLDVPFSDEDELELIKDLKKLLKDNPQESEFR PPSGTAKTLSQIAVDDLVADLSDLSLQQTDDADGLSGGCAFLTLDLLAQLRSDLTSAT QAHALAFKGELGRGLAIKPIAREVERLEMAQPAEELQVLVEAGVARELELVEELAVG</aaseq>

Gene Sequence

<dnaseqindica>1..7#2727..3465#3548..3578#5324..5548#atgatttgttctacacttctacttaagtacttatctagtgaagtatctactagactactacttgcttagtttttacaactgtacttgtgagtagttcatacttgatacttcatagttcctactccctccgtttcacaatgtaagtcattttagcattttccacattcatattaatgctaatgaatttagatatatatatatatatatatatatatatatatatatatatatatgtctagattcattagcatcaatatgaatataggaaatgctagaatgacttacattgtgaaacggaggaagtagttactatcttgcaaacttgattagctagtaaggcagttagcgaggactaggagccttcaaccttggctactaggatttgttcataggaattcagagatcttagtaattagtatttctatcctttatgtatttcatatgctggcactttcatatgtttaccaattagtatttctgtatgttaaacaatttcaagtgattgtcaattctatcaatgtgtgaacttatgctcaattttatgttatacatgctatatattatataattattagtgtgtgatactatacaagctaatattaggcttttaggtgtatgaacaaaaaaaaaattaccccttcccatttcgaatacggtttgaaatcctgggcttgcccctggcttgttcgtagatttgcaatttgcaaaaaaatagagacgaaaacatcgcacgtggtatttcactgataacgctaatgctatcactctacagattggtatttgcatatttatagtcattttcactttccatcagtaaagtacaagtagtacagctattatatttcgtaatttttctcccttttttatgtttttatgtgtgaatttggacaccattataccgataaatgcattgtttgtataaactgatgagtactccctgtatttatctcttgtctttgccagtagcagctgcacagttaaaaggcttgtttctaggaatgtaccattgtttgcttctatagttttcagtatgacctgttgtggttgaagccgtagttgtctggtgtgctcattaacataaatattatgtgttatttgttgcattgaaggagcaccatggatggaactctttgaatgcttttcattcatttggaatatctagatatggttatggtgcatcaattaatttattcacataggtggtcaagggcatacttagagggtctcctctaagggttcatatgttaaatcaatgcctgtccaattcattggcctcccagtttagtttccatactccttggctgtattagtttcctgatctcgcacttcaccgtggtgcttactgaaaataagcaaactgtttgtcttgcagttgtctgttctgattgactgaaatttttcgtttttcagggctgaacctttttcttaagtaatagcaaactttatttgatctgaaatacatgtacatgctttttagccctagagatcctagaaaactttttattgttagcatggatccctgattttatttactgagagcattctaattactaaaacactgagaatcacctcactactctaaatactttatgcttagatgatatgttggtgttcttctcacacagccttgtagtgttacaatatacagtttctaaatcctggctccaccatttttttattattattaacttcgattgggaatgcttcactaaatgttgggctggaaacactgtttttgtgtgtgtgacatttgccagcaggattattccctctccctcatcctaattacatttgtgccgtccctgctgttgggttgttgggtcccccttggacctccaacagcagtatgaacacaggtacacaacatgtcaagcttaatttgcaggcaaagtggacatgagcgagggctttctgtcaatgtgttcacaaatgtgcctactccctccggttcccgtttagttgatgtttgaggcttggactattttggatggaaaatcttgacgttttagccatgtgatcaatttagactgatttgcccctgcttggctgcatgcatgcaaatcacatttaacttggtgcatctgagtccttcacagcaccataaaaatcatgaggataaaatcaatttgccgaatcatctcctacagcatagtaaaaatcgtgtggaaaagtagggtgccaagattcaaacttagcacatgaagctttgggactagcagtcataaccaccaggttaagaggatttgcttgttggatgtgctattctaatgtgaacttattaatcattccttggtatgtgagctcctgtccaaaacgtcaataactttgaaaccggagcgagtactgcctaggggcacaaagccaattattataaccacctccatcaattagggtttttatccagggcaagacttccatccctatgttggatgccctttgctgaaaagctatttgttgtattactacttagctcattactttcctcttttgtatctgtactagatagtaaatgtgatagcatctcttgttttctcttgagggaaaatgatagcatctcttgtagcttatagttcttaaagatagtctttatattcgtaactgattacctggatgttacctctatttgggtgatacagtttttcccatccattcatatctacaggtattaaaggcagcatctttaccaaggtgctaatcagtcacatgcataaccatgacttctgaagacggagacatttcagctctgctctctgaaccaagtattcctgaagagcagcctgaggcatctgaattcgatgacgtcgtccctgcaattttggaatcaattaaatcaagtgagaaggcattcaaaccttcaccggaggaggctgcttgggctgattcttgttttgtgcagacatctgagctttcggatagtgactggggagcaatgaagcatgccctgcttaatgctcttgaaaagccaacagaaatacccaacaatacttctgaaattgtgcacgaagaaggttcccatgcaattttagaggtcaaacctcactctctccctgctgaaattgtttctcagcatgatgacatgcaaatggagcaaaaagaaaataatgattatgacactggtactactgaagcttcggaagttgctaatgtaattaggggcacaaatgaacatggtaagcaaatggatggatacacagccagacctgaagatggcgatgagttgtcttcgtctgaagttcttgagcagacagagtcaagagagactatctttaaggtgtgggatctggacgttccgttttctgatgaggatgagcttgaactcatcaaggatctgaagaaactcctcaaggacaatcctcaggagtctgaatttcgacctcccagtggaacagccaagacattgagccagatagccgtcgatgatctagtggcagacttgagcgacttgtcattgcagcaaacagacgagtagcaacattcccccaagatatttctgtggcaaaattttttaccatccccgatgaactattcttcgttctctagctaacagtgcagatggcttaagtggaggctgtgcgtttgtaagaattagattgactgtttcgctgttcttttgaatctctacctttcttaataggtagttgtagtaaaaaagttgttcttttttatctgcgtgtattaaactataggtcctcaaacttgcacgcttggtttgtgcacgtccctgtactgattacgcatccacataatttgggtccttctggctatagacatgccacttgtaagttgacttgtgctgcgaacggcgtttaatcgtcctccgtgttttgcgctctcgtcctcaatctgccgctcccgggcgggctgtcagtttagaggagcttatggcagttgccaaaacatcttcaaacagtctacatttctacttaaatattaaaaagatgtagttgtataatccaaaaaaataaactagaagccagaagttgtatttccctgcttctctatattcttaccaactaggttctcagaattaaacttctcaaatagggcctaagattctaaagcagatggtagcttttgagaatatgaaaaagttaggtttttcaacttctaaattttagtttattttctgaattttacaactacaacttctcataatctaaacgaaaaactgagttgtttaggtgagattctaattctggaagaagttatagcggccagaaacttccctaaataggtcctaggtgagtttctcttagacaagttttggcactgtcagagactatattgattttggtaaaaattggctatcatttgtactaagatttggcattaaaccaaatcagcctatcaattctatatttaggtcttacctacaagatcacatatttagacataatcaagatcttcgataagaatcctataaggccgactctctcacacattgagatgcttgatatgatcattgagttgaattataccgggcaactctcgcatatattaagacaccatctctaaataaaatcttacaagaccaactatctcacacattaaggtatgatcttacaattctacaaaactgactccatgcaaagctagctagacacatcgacagctgtcgactaaaggttttagtgacgcaagaaaagaacgacaaatgcacttgcgtgctattgatgacatgtcaccaatgttttaaatagctgactaaggcatttagcggttagcttctcaaacagctatagcgggctaaatggagctatagcggctaaattgtacatgaaagcaaatagctagaacccttctcaaacagctatagcgggagatagcggcagctatagcgggagatttaaaaccctgcatgtcactccccatgggtatgtaaattatcatttatttatatactaagctaaactttgatcatgcttgaaaatatctaatgatcatatagtttgaacctaaatttgatataacataagtaaatatcataaaaccccatgtattatggtccaacttcataaactacgtggcttttggcacgtgatacattacccccaagtattatggtccaaaaattttacaaaatcatatggttaataatttgggttaattggatcatgccattataaaattgctagttttgataaatactattactatttatcttttttaagcataccactacatctgtctcaaaattggatacatgccatcatctacacttaatatacgttttgaatcattttacatgtgttgtattttagtatggaccaaaatacctccgcttactacatcgcaagcattgtggttccccatcctggatcagctcacgctagacctgctagcacaactccggtctgacttaacttcggctacacaagcacatgcccttgctttcaaaggcgagctaggacggggtcttgctatcaagccgattgccagagaggtggagcgactggagatggcccagccggccgaggaactccaagttctagtcgaagcaggagttgccagagagcttgagctagttgaggaattagcagttggctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0469000, RefSeq:Os02g0469000