Os02g0469600

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Revision as of 02:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0469600| Description = Similar to Cysteine proteinase 1 precursor (EC 3.4.22.-)| Version = NM_001053363.1 GI:115446096 GeneID:4329339| Leng...")
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Gene Name

Os02g0469600

Description

Similar to Cysteine proteinase 1 precursor (EC 3.4.22.-)

Version

NM_001053363.1 GI:115446096 GeneID:4329339

Length

3658 bp

Definition

Oryza sativa Japonica Group Os02g0469600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:16670452..16674109

Sequence Coding Region

16670496..16670966,16671085..16671204,16673110..16673353,16673466..16673752

Expression

GEO Profiles:Os02g0469600

Genome Context

<gbrowseImage1> name=NC_008395:16670452..16674109 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:16670452..16674109 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatcaccgcctcctcctcctcggcctcctcctcctctccccggcggtggccgccgcctcagtccccggcgaggaggagccgctgatccggcaggtggtcggcggcggcgacgacaacgagctggagctgaacgcggagcgccacttcgccagcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctctccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcggagcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacctcggcctccgcacgtcgcgccgcgccttcctgcgggggctcggcgggtccgcccacgaggcgcccgtcctccccaccgacggcctccccgacgacttcgactggagagaccacggcgccgtcggccccgtcaagaaccagggatcgtgcgggtcgtgctggtcgttcagcgcgtcgggggcgctagagggagcgaactacctggcgacgggcaagatggacgtgctctccgagcagcagatggtcgattgcgaccatgagtgtgattcatcagaacctgattcatgtgatgctggatgcaatggtggattgatgactaacgccttcagctatcttttgaaatccggtggccttgagagtgagaaggattacccctacactgggagggatggcacctgcaaatttgacaagtcgaagattgttacttcagttcagaacttcagtgttgtctctgtcgatgaggatcagattgctgccaaccttgtcaaacatgggccacttgcaattggcatcaatgctgcgtacatgcaaacatacattggtggtgtttcgtgcccgtacatctgtggcaggcaccttgatcacggtgttcttctcgttggctacggcgcatctggttttgctccaatccgcctaaaggataaggcctactggatcatcaagaactcctggggcgagaactggggagagcatgggtactacaagatctgcaggggctccaacgtccgcaacaaatgtggcgtggattctatggtctccaccgtgtctgccatccacacctcaaaggagtag</cdnaseq>

Protein Sequence

<aaseq>MDHRLLLLGLLLLSPAVAAASVPGEEEPLIRQVVGGGDDNELEL NAERHFASFVQRFGKSYRDADEHAYRLSVFKANLRRARRHQLLDPSAEHGVTKFSDLT PAEFRRAYLGLRTSRRAFLRGLGGSAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSC GSCWSFSASGALEGANYLATGKMDVLSEQQMVDCDHECDSSEPDSCDAGCNGGLMTNA FSYLLKSGGLESEKDYPYTGRDGTCKFDKSKIVTSVQNFSVVSVDEDQIAANLVKHGP LAIGINAAYMQTYIGGVSCPYICGRHLDHGVLLVGYGASGFAPIRLKDKAYWIIKNSW GENWGEHGYYKICRGSNVRNKCGVDSMVSTVSAIHTSKE</aaseq>

Gene Sequence

<dnaseqindica>45..515#634..753#2659..2902#3015..3301#aaccaatccaattccgaacaagcaaggcaccaaatccccccaccatggatcaccgcctcctcctcctcggcctcctcctcctctccccggcggtggccgccgcctcagtccccggcgaggaggagccgctgatccggcaggtggtcggcggcggcgacgacaacgagctggagctgaacgcggagcgccacttcgccagcttcgtccagaggttcgggaagtcctaccgtgacgccgacgagcacgcgtaccggctctccgtgttcaaggccaacctccgccgcgcgcgccgccaccagctgctcgacccctccgcggagcacggcgtcaccaagttctccgacctcaccccggccgagttccgccgggcctacctcggcctccgcacgtcgcgccgcgccttcctgcgggggctcggcgggtccgcccacgaggcgcccgtcctccccaccgacggcctccccgacgacttcgactggagagaccacggcgccgtcggccccgtcaagaaccaggttcccctctcgtctcccgtcgatttttcccccaaaccaaggactcctcctttgatttctcgattgaatcagccgtcttatcgtttcttgattttttttaatttttttgcttttgcagggatcgtgcgggtcgtgctggtcgttcagcgcgtcgggggcgctagagggagcgaactacctggcgacgggcaagatggacgtgctctccgagcagcagatggtcgattgcgaccatgaggtgagaggcgtttgcttcccctttcttgtttttgcgtactggtatattattatccttttattaggagcaagttttatttgtaattttgtgattggtctgtgcttctatgggtgttataagagaggttggatgggtgctataagagaggttggatttttctggctttccgccaatgttttgtcagctgctgcgctgtccttttcctatctattttcttggtttgtgattgggcagcgcacccaaatgagaaggggaaagggaaattggggcaaatgaatgggaaagggaaatttgggaaaggagttgcatgattccttggctaactttgaaagggaaattatgaggaaaaaagagtggcttgtggtattatcagtgcttaagaagtcaaaccaaagtggtgaacttagcaagcaaatttgtcgtggtcgattttatagtggtgaagtaggtgaataaaacaaaagatgatgaatgcaaggctgagtggataaaatctccaattgatactggcacatgtcgctctggaagatcggtctaggtaggcgtctctctgggtctaccgcaggtggataaaactaagatgagatctaggtaagcgtctctctgggagttcatggtgaccttgtgcattgataggtctatgaaataagagagttcatgcacccttgtgtgttggtacgtgcctatggtatggtaacgaacaagcgtatacaattgggcacaaagggttgtttgagtgggcacttaatgaactgaaaagtgctgaacttgggaaccctatgattagttaaattttagagaaagggagttaagaaagtacccgatgttctggggttgtcatgtattccagcaattttagtttttaggtactagtgaagctaccatgaagaagttgtaaattactcaaatctcaaccattaagttcacttgagtgaaaaatataaatggagtcgatatcggccgcaggttgtttctgtcattgcttcatttcttattttactgtctcacttgatggatagacagccaaacgtttgtgtgcactggcttgatgtactctttcgttttggtaactgggccccaggtgagaccccatcttggtgatattgttgtacaactgaataactactgtaccttttatatcattatatcggttaagaaaaaaataatcaaatttcctcttttcttttggatgtgtcatcatattttaggggcaaatttccggtttcctctttcatttggttgtgtccatcatattttaggggcttgctcttgacctatttctttccatatttacttcttgaagcttcactcctaaatcctaattaatgaaaaagttagtgcttctctgttctgttcaaaaataaaacaaatcttatttccataataacacaattcactaaaccatccttacaaagtctgcaccaccgttttaatttccgcctatagcatgggtgattctcttcctagttgaaaattctatgtaggattttttggtagtaagatgtaagtggctctcattctagaaggcttttcattactaagcttctacattaggaaatgcgagaaatatttgttcagaaaaaacaattttctcatatatttaaaagataatcaacagtgattcctatggtaattttacaaagtagcaccaggctaatgtcttgcacaacctctacaatttgtcgtaaccagcttaagtgattttcacattgctttcatcgcaaagtacacatgtaaagcttacccgagtcgtgctcaaataatttttagccttcctggtattataatactttttttgacttgacagtgggatatgtactgttgttatttgttttctactgttacctgtttcaactgaatggggtatctcaacttactgggcttcattgttatctaattttgcagtgtgattcatcagaacctgattcatgtgatgctggatgcaatggtggattgatgactaacgccttcagctatcttttgaaatccggtggccttgagagtgagaaggattacccctacactgggagggatggcacctgcaaatttgacaagtcgaagattgttacttcagttcagaacttcagtgttgtctctgtcgatgaggatcagattgctgccaaccttgtcaaacatgggccacttgcaagtaagtactataaccatctctcggaatgatgcatttgcaggtctgactgttatatgtaaatacatgaatatattgtgcaattgctgatgaatgacttcacattttcctgcagttggcatcaatgctgcgtacatgcaaacatacattggtggtgtttcgtgcccgtacatctgtggcaggcaccttgatcacggtgttcttctcgttggctacggcgcatctggttttgctccaatccgcctaaaggataaggcctactggatcatcaagaactcctggggcgagaactggggagagcatgggtactacaagatctgcaggggctccaacgtccgcaacaaatgtggcgtggattctatggtctccaccgtgtctgccatccacacctcaaaggagtagattctgatcagtagtcccccgaccatcctgtggatggttcacagttggtgattctgatattatatataagctagaactacgaaatatacttagtttatgctccatctgcgctgttattgcagttatgataagcagcgatgatgtgaagctgcaactgaatgtttgtcctaagttatatgcttggtttgctacgcaatgctacacgctatttggaggtagctttaagtattatcgccattcacgaacttgtatttttactattaccaatcttttgaatggtctgtattatatgcatgtggtctgtttacatggaataactctgtctattgctacgaatttgcgtcttgcacattctcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0469600, RefSeq:Os02g0469600