Os02g0475400

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Revision as of 02:29, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0475400| Description = Bile acid:sodium symporter family protein| Version = NM_001053378.1 GI:115446126 GeneID:4329356| Length = 3427 bp| ...")
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Gene Name

Os02g0475400

Description

Bile acid:sodium symporter family protein

Version

NM_001053378.1 GI:115446126 GeneID:4329356

Length

3427 bp

Definition

Oryza sativa Japonica Group Os02g0475400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17044266..17047692

Sequence Coding Region

17044340..17044722,17044852..17044947,17045069..17045375,17045495..17045742,17046279..17046516

Expression

GEO Profiles:Os02g0475400

Genome Context

<gbrowseImage1> name=NC_008395:17044266..17047692 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:17044266..17047692 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccgccgcggtggcggcctcctcctcctcctcctccagcagctgcgccgccgtcggcgtagccaccgcctcccacccccaccgccaccgccaggcccgcttcgtcgtctcccctcccgcgccggcctcccccgcggcgctgctctggcggcggccgcggcgggtggctccgaccacgttctgctccgcgccgtcgctcggccgcgtcgggtggccgcggcgggagggtgccgcctggctgctgtcgttccgcgccggcccggtttcttccccgtcgtcggcggcggcgggcgatccttcccaggcgctctccgcgctgctcccgctcgtcgtcgccgccaccgccgtcgccgcgctcggcaaccccgctaccttctcatgggtctccaaggagtactacgcgcctgcacttggcggcatcatgctctccattggcatcaaattatccatcgacgacttcgcgttggcattcaagaggccggtgcctctgacgatcggctatatggcgcagtacattgtgaagccgctgatgggcgtgctgatcgcgagggccttcgggatgccgtcggcgttctttgcaggctttgttcttacttgctgcgtctccggcgcgcagctgtcgagctatgctagcttcctgagcaaaggggatgttgcattgagcattctgttgacaagctgctcgacgatatcttcggtggttgtgacacctgttctcactggactgctgattggttctgtggttcctgttgatgggatcgcgatggcgaaatccattttgcaggtggttcttgttcctgtcacactaggtcttcttctgaatacatatgcaaaagcagtcgttaatgtcattcaaccagtaatgccatttgttgctatgttgtgcacatcgctttgtattggaagccctcttgctatcaacaggagcaagatcttatcttcagaaggattcctgttacttctccccatagtgactttccacattgctgccttcattgtgggttactggatttccaagttgcctatgttgaggcaagaagagcccgtttgcagaactatttctgtatgtaccggcatgcagagctccaccctcgctggacttcttgctacacaatttcttggaagtagccaggcagttcctgcagcatgctcagttgttatcatggccatatttggtttgactctagcatcatactggggaaatggtttgcgaatcagagatatcggttcgagatttgttccacaagcttccgcaggtgtgagctcatga</cdnaseq>

Protein Sequence

<aaseq>MAAAVAASSSSSSSSCAAVGVATASHPHRHRQARFVVSPPAPAS PAALLWRRPRRVAPTTFCSAPSLGRVGWPRREGAAWLLSFRAGPVSSPSSAAAGDPSQ ALSALLPLVVAATAVAALGNPATFSWVSKEYYAPALGGIMLSIGIKLSIDDFALAFKR PVPLTIGYMAQYIVKPLMGVLIARAFGMPSAFFAGFVLTCCVSGAQLSSYASFLSKGD VALSILLTSCSTISSVVVTPVLTGLLIGSVVPVDGIAMAKSILQVVLVPVTLGLLLNT YAKAVVNVIQPVMPFVAMLCTSLCIGSPLAINRSKILSSEGFLLLLPIVTFHIAAFIV GYWISKLPMLRQEEPVCRTISVCTGMQSSTLAGLLATQFLGSSQAVPAACSVVIMAIF GLTLASYWGNGLRIRDIGSRFVPQASAGVSS</aaseq>

Gene Sequence

<dnaseqindica>75..457#587..682#804..1110#1230..1477#2014..2251#gcgcgcactccctccctccctccctcaccgtccaattccatccgctcctcctcctcctcctcctcgccgtcgccatggccgccgcggtggcggcctcctcctcctcctcctccagcagctgcgccgccgtcggcgtagccaccgcctcccacccccaccgccaccgccaggcccgcttcgtcgtctcccctcccgcgccggcctcccccgcggcgctgctctggcggcggccgcggcgggtggctccgaccacgttctgctccgcgccgtcgctcggccgcgtcgggtggccgcggcgggagggtgccgcctggctgctgtcgttccgcgccggcccggtttcttccccgtcgtcggcggcggcgggcgatccttcccaggcgctctccgcgctgctcccgctcgtcgtcgccgccaccgccgtcgccgcgctcggcaaccccgctaccttctcatggtgagtgggagatagtcaagtcaagccaaaccccctggacactttcacgaatgttcttagcttggaatcttggggcaactagcacatggtcagctttaactaattcgatataaattatcactttggtagggtctccaaggagtactacgcgcctgcacttggcggcatcatgctctccattggcatcaaattatccatcgacgacttcgcgttggcattcaagaggtttacttgcattctactatactatccatctcaagatcactaacttgattgtgtacagcaggaatatgtatgcatcagtttgtctgaatgtttctttctttgtgtgtgctgcattatgcaggccggtgcctctgacgatcggctatatggcgcagtacattgtgaagccgctgatgggcgtgctgatcgcgagggccttcgggatgccgtcggcgttctttgcaggctttgttcttacttgctgcgtctccggcgcgcagctgtcgagctatgctagcttcctgagcaaaggggatgttgcattgagcattctgttgacaagctgctcgacgatatcttcggtggttgtgacacctgttctcactggactgctgattggttctgtggttcctgttgatgggatcgcgatggcgaaatccattttgcaggtaatgatatgcgttcttgcttggctgcttagtgatgaaaccattcattttgtggtatatattttcttgttaccctgtcactgtgtgctaatgctactctgcaatttcccatttgccaggtggttcttgttcctgtcacactaggtcttcttctgaatacatatgcaaaagcagtcgttaatgtcattcaaccagtaatgccatttgttgctatgttgtgcacatcgctttgtattggaagccctcttgctatcaacaggagcaagatcttatcttcagaaggattcctgttacttctccccatagtgactttccacattgctgccttcattgtgggttactggatttccaagttgcctatgttgaggtagttctataatactgaaatcttatttttacttgttatcaatgtctgtcttgtatcactaacttaaaacaaaatggtggaatttgttatgcatacacaacttcatatcccctatctttttgggcctcatgccttatgaagttctggtccttccttgatggtacagtattgtttaccaaaattattattccatcgacctgaactattttgaagaagtgagcatcttttgttttgcgaaccataatgatcaaaactgagcatattttccagaaatgtataattttgccccaccattttcctaaaaccatggcatcgactcactttaatcactttcctgatttatggccagttatatatagcatttgggtaactttatcttcttagtggtaagctgaactaacatcacatgaccactagttgcttttcttacattgcattctgtaattggcaactaaatccagaattcttgcagacaagtatactttggaaccgccttcatgactgttcttttgaaattcttttacattggtactcaggcaagaagagcccgtttgcagaactatttctgtatgtaccggcatgcagagctccaccctcgctggacttcttgctacacaatttcttggaagtagccaggcagttcctgcagcatgctcagttgttatcatggccatatttggtttgactctagcatcatactggggaaatggtttgcgaatcagagatatcggttcgagatttgttccacaagcttccgcaggtgtgagctcatgataaagcttttggggtgcagcatttagattcgttcatgggctcccccgtcaagttccagaattcctgagcaattggaggctgtagtacacagaagatgccgtgctcttgctgtgtaaatcctccattagcaacaagagatcaggaactgcaagctgtgcatttttgaagataaccagcaataagaacagccttacttagatcgaaggatgctgggatggcacagcagtcaaattataccttagtaccatacaatatactgtagatttcaggtaatgcatcctcaactcatagaatgtagatattagatactgcacgccctcggcatttttatacttggtacaaaaatattatgtatgtcgaatatcattgctcgccattcctatcaagatcaaccgcgtagtacccttttgtgctgcttgttatttttgctccagtatttgtcaaaaagaaattctggtgtttattgcttcatattaagtaatgacttatgaaaaaacccacctaacaaattgggggtaaatatagatgaaaacgttaaacagcactgctgctaccagttctcattcttgtgcaaaataaacctgaaaagtttcacatatatctattttatttctggctggacaaaaccaaaagtttcatatacattttattctggtgaaaagaaaataaaataaaaaggagagataagtacattttgttctgttcctgaaaatatctgactattaatgtttggcatttctgtcaagaacaagaaacatacgagtgagacatgaagccttatttcccttttgttcttgcatgaattgcctgtccacaggatactatgcggtgtacctagcaagcagagtcgcactctgcagtgttctcagttgtgagtgccacaaggttgcgggcagagtccaattacgattggccgatttgattgccattctacatctagaagatgtcacagttgtttcacatggatctctttctctggtccatttctttgtcgtttttggtacacatgagcagtccatttcttcagtttgtcgctgcatgtagccatgtagatcgcgtgggtagtgacagcaacggccagaaaggaagatttgagatatttttcagctgtcttgtagaatttgtaggatctcatgataaccttcaataaagagtatttcttccatgttatttagg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0475400, RefSeq:Os02g0475400