Os02g0478550

From RiceWiki
Revision as of 02:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0478550| Description = Conserved hypothetical protein| Version = NM_001186035.1 GI:297721202 GeneID:9272576| Length = 4661 bp| Definition ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0478550

Description

Conserved hypothetical protein

Version

NM_001186035.1 GI:297721202 GeneID:9272576

Length

4661 bp

Definition

Oryza sativa Japonica Group Os02g0478550, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17205160..17209820

Sequence Coding Region

17205160..17205453,17207156..17207316,17207679..17207712,17208374..17208476,17208862..17209041
,17209804..17209820

Expression

GEO Profiles:Os02g0478550

Genome Context

<gbrowseImage1> name=NC_008395:17205160..17209820 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:17205160..17209820 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgctgcgctgcgtgtacacgcagcggcggtgggcgcaccggcggggaggcttcgtcaccggcgggaccggctggtcgcagcggcgcgcccccgccgcggcggcggctgttggcgcgggcgcgggcgcgaagaagtcggagtggtgggcggtggacggcgagatgcacgagatcggggagggcgtgccgcaccgcgagcgcttcgccatcccgcgcgacaacctccccaaccgccgccggaagcagatgcgggagcagttcatgcgccgcacgcgcctcgtcctcaaggacacggaacatgaagcttggtgtaaaaaatatatggaactataccaagaacttagagagaattgggaaaggttatattgggatgaaggttattccaaaaagattgctgaagatcatgctaattatgattctgctgaagaagatgatctagacttctcaccttacagcaggagaaggcacaccaatgtagagccaaacaaggacattggttttacggcaagcaaacaaggtgaaacatgggaaagggttactcaaattcgtgacaagtttgaatatgacagagagagaagaatgagggaacgagcatttgctcccatgaatatggagaacaactttgggcagcatgactcgagattcaggaaccgacatgattcaaactatgcccctagaaacatggaaaataaatttggttcaaatgactcagattttggaacccaatctggtagaagtttccgacatgatccaagtttcaggaaccagcacggatcaccatttcgatag</cdnaseq>

Protein Sequence

<aaseq>MLRCVYTQRRWAHRRGGFVTGGTGWSQRRAPAAAAAVGAGAGAK KSEWWAVDGEMHEIGEGVPHRERFAIPRDNLPNRRRKQMREQFMRRTRLVLKDTEHEA WCKKYMELYQELRENWERLYWDEGYSKKIAEDHANYDSAEEDDLDFSPYSRRRHTNVE PNKDIGFTASKQGETWERVTQIRDKFEYDRERRMRERAFAPMNMENNFGQHDSRFRNR HDSNYAPRNMENKFGSNDSDFGTQSGRSFRHDPSFRNQHGSPFR</aaseq>

Gene Sequence

<dnaseqindica>1..294#1997..2157#2520..2553#3215..3317#3703..3882#4645..4661#atgctgcgctgcgtgtacacgcagcggcggtgggcgcaccggcggggaggcttcgtcaccggcgggaccggctggtcgcagcggcgcgcccccgccgcggcggcggctgttggcgcgggcgcgggcgcgaagaagtcggagtggtgggcggtggacggcgagatgcacgagatcggggagggcgtgccgcaccgcgagcgcttcgccatcccgcgcgacaacctccccaaccgccgccggaagcagatgcgggagcagttcatgcgccgcacgcgcctcgtcctcaaggacacggtaagctgccgccgccgcgcgcccgcacctgtagttagctgagctctgctcctcccccaatccccccgcgctaggattggattacccattccttttgttgaaacaatgattggattgagctcggctgcttgtttctgaacaatttggttgagcccaaatggaaacgaactctgcaatttgatttgtgcaggcaagtactgatgtactaccacttattatgcatttattagttttcattgggaagtaggataaatctccttgctaataagctagcagaaatttggaatcatgggataggaaaaattgagaaacatggaatgaaactcaagatgctattgtatcttaatgcagtcagtaacaagcagcagaaatcattgacaaaatggggtctgaattcagtttttttttagaagatctgaattcgaatattaagccatgtcttctctaagcggatgatgcccccttttcctagatccgaagccgctgccattttgtcctattaaaaatcatggaagttctgcagcaactcaactttgtacattaattttttttttccttttcatggttagtaagatttttctgccttgctctttaagactaattatgttttagccaacttcaatctgctattatctgcacactcgcacttatatcttttctacttttagttggtcacacactgaacatgtaatctctcagatctcttctttttggcaatagaaagggggcgtatgagcgtatcgatgtatggtgcaaacagaagaacatgttgatgcacctttgttgttagtgtacgattcaggacaagaaaagggcaaaccaaattcacattatttattcttcatttctgagagccagtgtaactgaggccatcctaacctgatttttgtgagacctaagcatggttagctgttttcttgtggattgcacatactgattcttgaaatacattttaggcatgtcgtacactttatataactatcggtccattatttcgttcattagtcagtgccaaaactttggtcaccaaagcacttttcgctggttttgacttttgaggtgaagagatacaaactatgtgaattgtgaaggctttgatatggaaataagataccatgaaaattctgtgttgccatagcttaggttaggcatttcttggaataaaccagacaggtgcatgtactgtgtgagaattcatgattttggattcgtgaaaaatcattatttcttacagcaagaattttggactttggaaaacaacatcaagttcaggtttttgttgtatttcatatctcatgcctacctgtcatcaaggtttttatcaaaagcattcatgtcagttaccttttttagtcgaacattctgtctcttcgtttgtttatttgagttgcccatgatgtgcaattcatgaggacaaattgcattaaattcttttgttcgaactttgaaatgttccttgtggccaactgtagttaggagcacaattaactatttaatacagtaaatggactgtgcataatgaactgaactgaatggaaaatttgccgatcctctatttataaagtgctatgtttaatatcatgagagaacatattattttattattcatgaactagtgtgcaaaggctccatgtgctttatcggcttacagatatcagcatggcctttcatattaggtgactgaataccacaaaatttacaggaacatgaagcttggtgtaaaaaatatatggaactataccaagaacttagagagaattgggaaaggttatattgggatgaaggttattccaaaaagattgctgaagatcatgctaattatgattctgctgaagaagatgatctagacttctcaccttacaggtagaaaattttgaagggatttatttttgtcttgtttatttgctagtcaaattgctcagtttttgtcagaataaacctgagttaattgtatgtgcaattctttgataaatgtttgatataattgaaactgcttcctcttattttattgtttgtagtatctctccttttcattatgtgttattgcaactaagattgaattgaattgttttcctcatatatatatatttatcttagatttccagcctataaatgtttagcaatattctttaactagttatccttctgaagggtcttgctcgaaatagagtgccaataatatttgtcatctgtggaatgatctcatctgttgttttcaattgcagcaggagaaggcacaccaatgtagagccaaacaaggtaacctcattgtatttttgatggaccttatataatatcatttatttatgtagaaacctgcctgtaatgttccaatcttgctatgctaagggtgtcggctatcctttcatatggaaacacaaaatttctacctaagctagctagactgaaggggaattcttactaatccatgcataacctatgggtgttcaaactggttttgccaacccatttgtaactgcgccatgcacacatagactgcacccctgaaagtaatataaacaaatgaatgttcatttctgcatgtccattcaggttgccaagcccagttgacctggtatgaacaaccctagtgtcaaacttcagtggacatttttttttctactataatgcatgacattaactgtagtcaaaagtctacgacctcccattattttctgggaaaactactgaatactgaccatgggcaatcagattcagcacttggcagtattggagatatgcccttaagagttagagctcattagcggtactttagtggtgtagtttgtctttgcagctgctttagtcaaaggttttggtggcattgtctaagtagtatttaagcacacatcttcatgagtgtgatgacactacgcaaacttagcagcacaatcctaagttagcattgactttatttcaggacattggttttacggcaagcaaacaaggtgaaacatgggaaagggttactcaaattcgtgacaagtttgaatatgacagagagagaagaatgagggaacgaggtaaacatcatgtcttcatagttcatactggaatttttcttttttgtctgccattgctatttgtaccctcagataatgtataggtaaatggtaaaaaatgttaggcattttcactaacccaggatataattctgtaccaagttgctgatccttggctcgccgggcactccattcctaaaaaaatgcatttccacaacctcctgtccataaaattattgatactactgtttttatagtaaacatgtcatgttaaatgtgttgcccagtaactgtttttacactgttagacattttgcacatgaagttctgttggtattactttctttcagcctctatatgccatgtttaattatgttctttttgtctttctttctctatgatgcagcatttgctcccatgaatatggagaacaactttgggcagcatgactcgagattcaggaaccgacatgattcaaactatgcccctagaaacatggaaaataaatttggttcaaatgactcagattttggaacccaatctggtagaagtttccgacatgatccaagtttcaggaaccagcacggtttgaatttccaaaatgaatcaagtttcagaaatcaccagtatccaaatttccaaaaccaacgagacccaagaaaccgcgtgatgtcttctgaagatcaggaattgatgtcttctgatgatcaggaattctaataagcatgatcttgccgagtgcgaggtggccagtgaaaattgtacaactgaagcgtgctgattttgtaactctgttaagcataaacagaatgaaatgcattttacattggcaactgtagtataatgtcaatgtgtcccttcatcgttgagacttgagagaagggttgagtgttgtaggaatcatcacctgccttttacccgtctcttcatttgtgatgattcagaatactatatctagtatctacaacaaatagttatacactgactgtggcaaagtacaacgacaacctcaaaaaatgctcagatccagcgtgaattttgtaagtgatagaaaataatgccaatcctagagtagcgaatagaaaatgagggccatctttggagtgttgctggagcttgtcgccttcaaaagctccttagtgggacggctaacctaggcaactaagctccccgagttgtctagtgtgtgtgggtcttggtaggagggctcgggcactcctactttgttttttctttgtgttgtgttttttgtattgttttttcttccccttaatgaaatgaaatgcagctctcctgcctttttgaggaaaaaaaagcgtgaattttgttggtattttcttttatgcaggatcaccatttcgatag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0478550, RefSeq:Os02g0478550