Os02g0478600

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Revision as of 02:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0478600| Description = Similar to 40S ribosomal protein S15A| Version = NM_001053381.1 GI:115446132 GeneID:4329361| Length = 2118 bp| Defi...")
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Gene Name

Os02g0478600

Description

Similar to 40S ribosomal protein S15A

Version

NM_001053381.1 GI:115446132 GeneID:4329361

Length

2118 bp

Definition

Oryza sativa Japonica Group Os02g0478600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17219127..17221244

Sequence Coding Region

17220428..17220560,17220683..17220843,17220941..17221039

Expression

GEO Profiles:Os02g0478600

Genome Context

<gbrowseImage1> name=NC_008395:17219127..17221244 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:17219127..17221244 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggtgagagtcagtgtcctcaacgatgctctgaaaacaatgtacaatgctgagaagcgtgggaagcggcaagtgatgatccgaccctcatcaaaggttatcatcaagtttctcatcgtgatgcagaagcacggctacattggtgaatttgagtttgttgatgaccaccgctctggcaaaattgttgttgagctgaacggacgcctcaacaagtgtggtgtcatcagccctcgcttcgatgttggtgtcaaggaaatcgaatcatggactgcgaggctgcttccctccagacagtttgggtacattgtccttactacttcagctggcattatggaccatgaggaggctcgcagaaagaacgttggtgggaaggtcctcggtttcttctactag</cdnaseq>

Protein Sequence

<aaseq>MVRVSVLNDALKTMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKH GYIGEFEFVDDHRSGKIVVELNGRLNKCGVISPRFDVGVKEIESWTARLLPSRQFGYI VLTTSAGIMDHEEARRKNVGGKVLGFFY</aaseq>

Gene Sequence

<dnaseqindica>1302..1434#1557..1717#1815..1913#ctcgagacctagggcttcctccttcccctccgagcaccgccgccgccgccgccaccgccaccgcagcctgaccgctcggtctccggcaaccaggtgcgagtcccccccccccccttcctgaccccagctcaagcgaggcatttctcgtgttcgtcagttctatccatgtggttgcgctcgagtgtgttgttcctttcgtctgatctgaaggccccccgtacctgattttgtttgtgagctacgtgctgttcttgagtctgctgggttatactgtaatcattccgaccatccgggttagctaagagtttttggttgctagatgttgagagtggcatcgctggtggttgggtggatctccagtaaccatgtatttttgttagtatagtatttatctgcgatttagttgttggtcttggtggacaatttcgagtcctttcgatttgggaatgactcgcaactaggatgttggtgcttttgtacggtcgatttgcaatgtagcgactagcgagctatccatttcaacagattatttttactacctgggggtttcgtggggcagaaatgtgtagtgtcttcatgaacacttaatctgctgactaactattgacacagtgggagaagttttggtttaaaggaaatctggttttcatgttgctttgttggcatttcaaggtagcagcttcgtatgggattttatttaggaatgtgttctttctgttagattcagaatgctaaatgtagcagttaaaagtgtgacactgattttgttggttttcttaatgaagcagctgacggttgcaatttcatttgctagaaactacgatgtaatgcttaggaagtccaacagccaattaattttagaccattgttctaaaatggtatgatgtggtagtctgatggatcctttagttgcatgcattatatacttgttcacatgttacaaatcatgcattcatctgtgatagttgtccatacttatataatgatgtttggcatccttgaggtcattttttctataaaaaaggctatttgctatcttttgaaagtacattcaaatgtttgtagttgaactctgtattagtgatatacatttagtcattaagttgtcttatgctcggtttggacagatgcctacctgtttctttttttttttggtagctattgtttgtgtgtcaattattcagtgtttaccagttggagctatgttacaaatgtgaaatggttttactactgtctttattgaagcttgtagttttttaaggtgtgtttgttgccaacggtacttatcttttgcagacaaaatggtgagagtcagtgtcctcaacgatgctctgaaaacaatgtacaatgctgagaagcgtgggaagcggcaagtgatgatccgaccctcatcaaaggttatcatcaagtttctcatcgtgatgcagaagcacggtaagccttctctctgtgtttatgcatgctcactagtaatacgagctgcaaacctatagttcatttgtcaggagtattgagactggtgccttaactggtcatactgtatatcctcaatgtaggctacattggtgaatttgagtttgttgatgaccaccgctctggcaaaattgttgttgagctgaacggacgcctcaacaagtgtggtgtcatcagccctcgcttcgatgttggtgtcaaggaaatcgaatcatggactgcgaggctgcttccctccagacaggttagtaaagaagctataatttatttgggaacatccattagcttcagttcttttttctgtgaaatgttactaatgtttattgtttgttgctctccagtttgggtacattgtccttactacttcagctggcattatggaccatgaggaggctcgcagaaagaacgttggtgggaaggtcctcggtttcttctactagaaagatatatcttgttgacactctacggggatttcttatacagtagatggattctcccagtaggtgttagtggaagagcattttattagcagttgagtcaaaaaccttgttaagatgatcctcgaatgtctgaattgccccttaatgtcatatgttgtctgtttaattttgcttggcgacttgagtaagctgctgtattcttgct</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0478600, RefSeq:Os02g0478600