Os02g0489400

From RiceWiki
Revision as of 02:30, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os02g0489400| Description = Similar to 40S ribosomal protein S8| Version = NM_001053401.1 GI:115446172 GeneID:4329381| Length = 2496 bp| Defini...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os02g0489400

Description

Similar to 40S ribosomal protein S8

Version

NM_001053401.1 GI:115446172 GeneID:4329381

Length

2496 bp

Definition

Oryza sativa Japonica Group Os02g0489400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:17814460..17816955

Sequence Coding Region

17814542..17814545,17814661..17814733,17815331..17815661,17816297..17816472,17816685..17816763

Expression

GEO Profiles:Os02g0489400

Genome Context

<gbrowseImage1> name=NC_008395:17814460..17816955 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:17814460..17816955 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtatctcgcgtgattccatgcacaagcgccgcgccacgggcggcaagcagaaggcatggcgcaagaagcgaaagtatgagctcggaaggcagcctgccaacaccaagctgtcaagcaacaagacagtgaggagggtgcgtgtccgtggaggtaatgtgaaatggagggccctccgtttggatactggcaactactcatggggaagtgaggccgtgacccgcaagacccgtatccttgatgtggtctacaatgcatccaacaatgagcttgtcaggactcagacccttgtaaagagtgctattgtgcaagttgatgctgcccccttcaagcagtggtacctcactcactatggagtggatattggtagaaagaagaaggctcctgcagccaagaaggatgctgaggggcaggatgctgaagctaccacagaggaagcgaagaaaagcaaccatgttgtcaggaagcttgagaagcgccaacagggacgcacacttgacgcccacatcgaagaacagtttggcagtgggaggttgctggcctgcatttcttcccgccctgggcagtgtggccgagcagatggctatatccttgagggcaaagagctggaattctacatgaagaagctccagaggaagaagggcaagggtgcctcagcttag</cdnaseq>

Protein Sequence

<aaseq>MGISRDSMHKRRATGGKQKAWRKKRKYELGRQPANTKLSSNKTV RRVRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAI VQVDAAPFKQWYLTHYGVDIGRKKKAPAAKKDAEGQDAEATTEEAKKSNHVVRKLEKR QQGRTLDAHIEEQFGSGRLLACISSRPGQCGRADGYILEGKELEFYMKKLQRKKGKGA SA</aaseq>

Gene Sequence

<dnaseqindica>83..86#202..274#872..1202#1838..2013#2226..2304#gagagcgaggcacagctaccggcggcgcagccacacagcagcagcaggtgaggaggagaggagacccgccgccgccgccgccatgggtaagacgcctccttcctcgcccacggccaccgccgtctcctcgaacgctcccgctcctcctccgcctcctactcccggtcggtcgctgactcgttcgtttcgttcctctcgcaggtatctcgcgtgattccatgcacaagcgccgcgccacgggcggcaagcagaaggcatggcgcaagaagcgaaagtgagtgccccaatcattccccttctctaggtttctcgcttgtatatcttagttttagcgggtgtatttttagatcgagcccctctgttacgatttgtatgatctgtgtgggcgcgtgctcgagggcgcagcttcgttagatttggatcttgttcgttcaggacttgtggtagaaggcatcagcgtgtgtgattttgaacaaggctgagacttggacgcatcgttttacctaactgtaattttcgcatgttttgtgcttgatggctggagtagtaacagataggtcatttttcgaaggaattgcaaaatgaactggagatgtttttttttggcttataccatttcaaataccctatttagagattcagtggtggcagtatggagaacatttccaagtttagatgattgtagtacgctttggagttcttgaaccttttgtgcatgttttatttggcaatatcttagtactgttttatgtaactttattggccatattacttctaaacttgatgctggctgtgatttgagtatgttgctaaacgtgcatttgttctgttgtatgttagttttaatttgttctctcactttgtcatgaaggtatgagctcggaaggcagcctgccaacaccaagctgtcaagcaacaagacagtgaggagggtgcgtgtccgtggaggtaatgtgaaatggagggccctccgtttggatactggcaactactcatggggaagtgaggccgtgacccgcaagacccgtatccttgatgtggtctacaatgcatccaacaatgagcttgtcaggactcagacccttgtaaagagtgctattgtgcaagttgatgctgcccccttcaagcagtggtacctcactcactatggagtggatattggtagaaagaagaaggctcctgcagccaagaaggatgctgaggtatttttctcccttctgttgtacattttgatgtgattggtatagtagattcttatacacaattatttgtcgtcttataacttaagcttggtatcactttcgtgattggatgtatagatgcatattgaaagatctggactgttgactgtattgtccctagttacaagaattggactgtactttgcttatagctgcgtgcagttcttgaattggtatatttatgttttggtactgcagtagtatatattgtattctgttcacatgtataaaaccagaatgtatctactctttagtagcattttacctgtcctgcataaatatgctacctgcagcatgcacttggtaaaatccggtgcttatttataggattatatgttatgcttaaggtatatattttgcttgacggaaaagtatcttgtctataaccttgcaatgcattgcttgccggtaatcctttattcatgataataggaattagcatcaccaattttgcattcctagttgttgtaactctgggagcaactcttttagatttatcaaactgtgttcagacttgttattcctgtttacagattgactccgtaggttgtctttgagctgtcatatcatttgatccttcattgttgaatttacaggggcaggatgctgaagctaccacagaggaagcgaagaaaagcaaccatgttgtcaggaagcttgagaagcgccaacagggacgcacacttgacgcccacatcgaagaacagtttggcagtgggaggttgctggcctgcatttcttcccgccctgggcagtgtggccgagcagatgggtaagattccaacactgaatgaacatcattgtaaattaggcttttctcacagtatatgtcagcatggaggtggcatgatctcgagtatgtcctggtttgcaggggctcagatttctttttgttgattatagtgcagtctggaagttaaacaaatgcaagaataataacaatgctatctctaattaaaccatttattttataattccttgcagctatatccttgagggcaaagagctggaattctacatgaagaagctccagaggaagaagggcaagggtgcctcagcttagagcaagtctttctttgttgctggttctacactgaaagaactacccttttttgttccctgagagctcctatgttatgtttgcagacgcatagctgtttttttaggattaaacaactttagcatgatgacatgagaatgggttatgtactctggatgttattaagttaaaatatttactttctgccagctcgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0489400, RefSeq:Os02g0489400